lineage | Count |
---|---|
lineage4.9 | 1 |
lineage3 | 7 |
lineage4.3.2.1 | 2 |
lineage2.2.1.2 | 1 |
lineage4.3.3 | 4 |
lineage4.8 | 1 |
lineage1.1.2 | 1 |
lineage4.2.2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage2.2.1 | 8 |
lineage4.6.1.1 | 1 |
lineage4.3.2 | 1 |
lineage4.1.2 | 1 |
lineage4.1.2.1 | 7 |
lineage4.1.3 | 2 |
lineage4.3.4.2.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.5 | 1 |
lineage3.1.1 | 1 |
spoligotype | Count |
---|---|
None | 43 |
ID | Drug resistance | Lineage | Country iso2 | ERR4817222 | Sensitive | lineage4.9 | None | ERR2517411 | Sensitive | lineage3 | nl | SRR4035885 | Sensitive | lineage4.3.2.1 | za | SRR4036023 | RR-TB | lineage3 | za | ERR2514270 | Sensitive | lineage2.2.1.2 | gb | ERR2516210 | Sensitive | lineage3 | be | ERR2516312 | Sensitive | lineage4.3.3 | be | ERR2228882 | Sensitive | lineage4.8 | dk | SRR8380878 | Sensitive | lineage1.1.2 | in | ERR2517177 | Sensitive | lineage4.2.2.1 | nl | ERR4829505 | Sensitive | lineage3 | it | SRR5535773 | Sensitive | lineage4.3.2.1 | None | ERR4829897 | Sensitive | lineage3 | None | SRR5535925 | MDR-TB | lineage4.4.1.1 | None | SRR6339639 | Sensitive | lineage2.2.1 | None | SRR7535048 | Sensitive | lineage4.6.1.1 | None | ERR4972555 | MDR-TB | lineage4.3.2 | None | SRR6896395 | Sensitive | lineage4.1.2 | None | SRR6257023 | Other | lineage2.2.1 | None | ERR4831965 | HR-TB | lineage2.2.1 | vn | SRR6896468 | HR-TB | lineage4.1.2.1 | None | SRR7517790 | MDR-TB | lineage4.1.3 | ci | ERR4195589 | Sensitive | lineage4.1.2.1 | None | ERR4195550 | HR-TB | lineage4.3.3 | None | ERR4798405 | Pre-XDR-TB | lineage2.2.1 | in | ERR5863964 | MDR-TB | lineage2.2.1 | None | ERR4800601 | RR-TB | lineage3 | None | ERR5865647 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049944 | Sensitive | lineage4.1.2.1 | None | ERR7801142 | Sensitive | lineage4.3.4.2.1 | None | ERR9121598 | HR-TB | lineage4.3.3 | None | ERR8975555 | HR-TB | lineage4.1.1.3 | None | SRR16370408 | HR-TB | lineage4.5 | None | ERR9121660 | Sensitive | lineage4.1.2.1 | None | ERR9786810 | Sensitive | lineage4.1.2.1 | None | SRR10869058 | MDR-TB | lineage2.2.1 | None | SRR12882625 | HR-TB | lineage3.1.1 | None | ERR9786468 | Sensitive | lineage4.1.2.1 | None | SRR16370387 | Sensitive | lineage4.1.2.1 | None | ERR11050866 | Sensitive | lineage3 | None | SRR21659814 | HR-TB | lineage4.3.3 | None | ERR1679586 | MDR-TB | lineage4.1.3 | ng | ERR9807018 | Pre-XDR-TB | lineage2.2.1 | None |
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