Rv3457c - c.-74_-73insCAACCCA
Drug resistance types
122 Sensitive
2 RR-TB
39 HR-TB
133 MDR-TB
17 Pre-XDR-TB
3 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage1.1.1.1 | 1 |
| lineage4.2.1 | 82 |
| lineage1.2.1.2.1 | 9 |
| lineage4.3.2 | 3 |
| La1.8.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.8 | 30 |
| lineage4.1.2.1 | 16 |
| lineage4.2.2 | 18 |
| lineage4.2.2.2 | 36 |
| lineage4 | 61 |
| lineage4.1.1 | 10 |
| lineage4.3.3 | 8 |
| lineage4.3.4.2 | 2 |
| lineage1.2.2.2 | 13 |
| lineage4.4 | 3 |
| lineage1.1.2 | 1 |
| lineage4.5 | 4 |
| lineage4.2 | 2 |
| lineage2.2.1 | 6 |
| lineage4.6.2.2 | 2 |
| lineage1.2.1.1 | 5 |
| lineage2.2.2 | 2 |
| lineage1.1.1 | 6 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 325 |
Geographic prevalence
Country level data for this variant is available for 73 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4830360 | Sensitive | lineage2.2.1;lineage1.1.1.1 | vn | SRR6458408 | Sensitive | lineage4.2.1 | None | SRR6152910 | Sensitive | lineage1.2.1.2.1 | None | SAMN02584616 | Pre-XDR-TB | lineage4.2.1 | md | SRR6397664 | Sensitive | lineage1.2.1.2.1 | ca | SRR6511618 | MDR-TB | lineage4.2.1 | None | SRR6511640 | MDR-TB | lineage4.3.2 | None | SRR6930925 | MDR-TB | lineage1.2.1.2.1 | None | SRR6807690 | MDR-TB | lineage4.2.1 | None | SRR6807684 | MDR-TB | lineage4.2.1 | None | SRR6807713 | Pre-XDR-TB | lineage4.2.1 | None | ERR11067512 | Sensitive | lineage4.2.1 | None | SRR6807759 | Pre-XDR-TB | lineage4.2.1 | None | SRR6807746 | Pre-XDR-TB | lineage4.2.1 | None | ERR11067514 | Other | La1.8.2 | None | SRR7755678 | MDR-TB | lineage4.2.1 | None | SRR7496539 | Sensitive | lineage1.2.1.2.1 | us | ERR11067580 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11067421 | Sensitive | lineage4.8 | None | SRR9738546 | MDR-TB | lineage4.2.1 | None | ERR11067613 | Other | lineage4.1.2.1 | None | SRR7645885 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755676 | MDR-TB | lineage4.2.1 | None | DRR130233 | Sensitive | lineage4.2.2 | None | SRR9971167 | Sensitive | lineage4.8 | None | SRR7755735 | MDR-TB | lineage4.2.1 | None | DRR130239 | Sensitive | lineage4.2.2 | None | DRR188499 | Sensitive | lineage4.2.2 | None | DRR130236 | Sensitive | lineage4.2.2 | None | DRR130240 | HR-TB | lineage4.2.2 | None | DRR188768 | Sensitive | lineage4.2.2 | None | DRR188767 | Sensitive | lineage4.2.2 | None | DRR188561 | Sensitive | lineage4.2.2 | None | DRR188879 | Sensitive | lineage4.2.2 | None | DRR188786 | Sensitive | lineage4.2.2 | None | DRR188822 | Sensitive | lineage4.2.2 | None | ERR11044809 | Sensitive | lineage4.8 | None | DRR188872 | Sensitive | lineage4.2.2 | None | DRR189093 | Sensitive | lineage4.2.2 | None | ERR10762399 | MDR-TB | lineage4.2.1 | None | ERR11043162 | MDR-TB | lineage4.2.1 | None | ERR11043467 | MDR-TB | lineage4.2.1 | None | ERR11043867 | Sensitive | lineage4.2.2.2 | None | DRR189115 | Sensitive | lineage4.2.2 | None | ERR11043528 | MDR-TB | lineage4.8 | None | ERR3256227 | Sensitive | lineage1.2.1.2.1 | ph | ERR114495 | HR-TB | lineage4.2.2.2 | None | ERR133934 | Sensitive | lineage4.8 | ru | ERR137250 | MDR-TB | lineage4.2.1 | ru | ERR3256212 | HR-TB | lineage1.2.1.2.1 | ph | ERR3287536 | MDR-TB | lineage4 | None | ERR3287519 | MDR-TB | lineage4 | None | ERR3287696 | MDR-TB | lineage4 | pe | ERR3287558 | MDR-TB | lineage4 | None | ERR3287735 | MDR-TB | lineage4 | pe | ERR3287709 | MDR-TB | lineage4.1.1 | pe | ERR3287731 | MDR-TB | lineage4.1.1 | pe | ERR4011967 | MDR-TB | lineage4.2.2.2 | None | ERR351896 | Sensitive | lineage4.8 | None | ERR386828 | Sensitive | lineage4.8 | None | ERR4011952 | MDR-TB | lineage4.2.2.2 | None | ERR4011950 | Sensitive | lineage4.2.2.2 | None | ERR3287846 | XDR-TB | lineage4 | pe | ERR386897 | MDR-TB | lineage4.2.2.2 | None | ERR400319 | Other | lineage4.8 | gb | ERR4011954 | MDR-TB | lineage4.2.2.2 | None | ERR4011973 | MDR-TB | lineage4.2.2.2 | None | ERR4024703 | Sensitive | lineage4.3.3 | None | ERR4024537 | Sensitive | lineage4 | None | ERR4024626 | Sensitive | lineage4 | None | ERR4024759 | MDR-TB | lineage4.3.4.2 | None | ERR4024916 | MDR-TB | lineage4.1.1 | None | ERR4024922 | Sensitive | lineage4 | None | ERR4457778 | HR-TB | lineage4 | None | ERR4024983 | HR-TB | lineage4 | None | ERR4178124 | HR-TB | lineage4 | None | ERR4178144 | Sensitive | lineage4 | None | ERR4024944 | MDR-TB | lineage4 | None | ERR4024961 | Sensitive | lineage4.1.2.1 | None | ERR4457810 | Sensitive | lineage4 | None | ERR4457776 | MDR-TB | lineage4 | None | ERR4457791 | HR-TB | lineage4 | None | ERR4457840 | Sensitive | lineage4 | None | ERR4457818 | Sensitive | lineage4 | None | ERR4457828 | Sensitive | lineage4 | None | ERR4457858 | HR-TB | lineage4 | None | ERR4457845 | Sensitive | lineage4 | None | ERR4457836 | HR-TB | lineage4 | None | ERR4457843 | MDR-TB | lineage4 | None | ERR4457867 | HR-TB | lineage4 | None | ERR4457861 | MDR-TB | lineage4 | None | ERR4457893 | Sensitive | lineage4 | None | ERR4457869 | Sensitive | lineage4 | None | ERR4457883 | Sensitive | lineage4 | None | ERR4457904 | Other | lineage4 | None | ERR4457901 | Sensitive | lineage4 | None | ERR4457906 | Sensitive | lineage4 | None | ERR4457900 | HR-TB | lineage4 | None | ERR4457910 | HR-TB | lineage4 | None | ERR4596896 | MDR-TB | lineage4.2.2 | None | ERR4457912 | Sensitive | lineage4 | None | ERR4457916 | HR-TB | lineage4 | None | ERR4797134 | Sensitive | lineage4.2.2 | in | ERR4796484 | Pre-XDR-TB | lineage1.2.2.2 | in | ERR4797372 | Sensitive | lineage1.2.2.2 | in | ERR4797743 | Sensitive | lineage4.2.2 | in | ERR4797637 | MDR-TB | lineage4.4 | in | ERR4797677 | MDR-TB | lineage1.1.2 | in | ERR4797585 | Sensitive | lineage1.2.2.2 | in | ERR4797882 | Sensitive | lineage4.8 | in | ERR4797771 | Sensitive | lineage1.2.2.2 | in | ERR4797815 | MDR-TB | lineage1.2.2.2 | in | ERR4798310 | Sensitive | lineage1.2.2.2 | in | ERR4798054 | MDR-TB | lineage1.2.2.2 | in | ERR4798085 | HR-TB | lineage1.2.2.2 | in | ERR4798211 | Sensitive | lineage1.2.2.2 | in | ERR4800088 | Sensitive | lineage4.8 | in | ERR4798369 | Sensitive | lineage1.2.2.2 | in | ERR4798543 | Sensitive | lineage1.2.2.2 | in | ERR4799589 | MDR-TB | lineage1.2.2.2 | in | ERR4798560 | Sensitive | lineage4.3.3 | in | ERR4799107 | XDR-TB | lineage4.8 | in | ERR4799151 | Sensitive | lineage1.2.2.2 | in | ERR4812635 | Sensitive | lineage4 | None | ERR4800464 | Sensitive | lineage4.8 | in | ERR4810733 | Other | lineage4.5 | cn | ERR4809028 | MDR-TB | lineage4.2.1 | za | ERR4811667 | Sensitive | lineage4.1.2.1 | pe | ERR4811808 | Sensitive | lineage4 | None | ERR4812372 | MDR-TB | lineage4 | pe | ERR5908226 | Sensitive | lineage4.2.1 | None | ERR5908206 | Sensitive | lineage4.2.1 | None | ERR5908184 | Sensitive | lineage4.2.1 | None | ERR6866060 | Sensitive | lineage4.3.3 | None | ERR6865978 | MDR-TB | lineage4.3.4.2 | None | ERR6866031 | MDR-TB | lineage4.1.1 | None | ERR6336701 | HR-TB | lineage1.2.1.2.1 | None | ERR6865380 | Sensitive | lineage4 | None | ERR6865570 | Sensitive | lineage4.1.2.1 | None | ERR6866360 | Sensitive | lineage4.3.3 | None | ERR6866237 | Sensitive | lineage4 | None | ERR6866779 | Sensitive | lineage4.1.2.1 | None | ERR6866702 | Sensitive | lineage4.1.2.1 | None | ERR6866816 | Sensitive | lineage4.3.2 | None | ERR6866822 | Sensitive | lineage4 | None | ERR6866978 | Sensitive | lineage4 | None | ERR6866820 | Sensitive | lineage4.1.1 | None | ERR718298 | Sensitive | lineage4.5 | th | ERR7737645 | MDR-TB | lineage4.2.2.2 | None | ERR751465 | MDR-TB | lineage4 | pe | ERR7737707 | MDR-TB | lineage4.2.2.2 | None | ERR7737685 | MDR-TB | lineage4.2.2.2 | None | ERR7737855 | MDR-TB | lineage4.2.2.2 | None | ERR7737836 | MDR-TB | lineage4.2.2.2 | None | ERR7737906 | MDR-TB | lineage4.2.2.2 | None | ERR7737871 | MDR-TB | lineage4.2.2.2 | None | ERR7737882 | MDR-TB | lineage4.2.2.2 | None | ERR8975137 | HR-TB | lineage4.2 | None | ERR775313 | MDR-TB | lineage4 | pe | ERR7911240 | MDR-TB | lineage4.2.1 | md | ERR7912724 | MDR-TB | lineage4.2.1 | None | ERR8975473 | HR-TB | lineage4.8 | None | SRR10305811 | Sensitive | lineage2.2.1 | None | ERR9993049 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9029870 | MDR-TB | lineage4 | None | SRR1144818 | Sensitive | lineage4.2 | None | SRR10379883 | MDR-TB | lineage4.2.1 | None | SRR10808910 | HR-TB | lineage4 | None | SRR10379966 | MDR-TB | lineage4.2.1 | None | SRR10380083 | HR-TB | lineage4.2.1 | None | SRR10380085 | MDR-TB | lineage4.2.1 | None | SRR10397254 | Sensitive | lineage4.2.1 | None | SRR10808508 | Sensitive | lineage4.1.2.1 | None | SRR11444022 | Sensitive | lineage4.6.2.2 | None | SRR11444204 | Sensitive | lineage4.6.2.2 | None | SRR1163179 | MDR-TB | lineage4.2.2.2 | None | SRR1163014 | MDR-TB | lineage4.2.2.2 | None | SRR1146301 | MDR-TB | lineage4.2.2.2 | None | SRR1162986 | MDR-TB | lineage4.2.2.2 | None | SRR1163128 | MDR-TB | lineage4.2.2.2 | None | SRR1163208 | MDR-TB | lineage4.2.2.2 | None | SRR1163288 | MDR-TB | lineage1.2.1.1 | None | SRR1163345 | MDR-TB | lineage1.2.1.1 | None | SRR1165585 | MDR-TB | lineage1.2.1.1 | None | SRR1165515 | MDR-TB | lineage1.2.1.1 | None | SRR1165372 | MDR-TB | lineage4.2.2.2 | None | SRR1166146 | Pre-XDR-TB | lineage4.2.1 | None | SRR1166126 | HR-TB | lineage4.2.1 | None | SRR1166330 | MDR-TB | lineage4.2.1 | None | SRR1166177 | MDR-TB | lineage4.2.1 | None | SRR1166142 | MDR-TB | lineage4.2.1 | None | SRR1166166 | MDR-TB | lineage4.2.1 | None | SRR1168977 | MDR-TB | lineage4.2.1 | None | SRR1167061 | MDR-TB | lineage4.2.2.2 | None | SRR1168978 | MDR-TB | lineage4.2.1 | None | SRR14782016 | MDR-TB | lineage4.2.1 | None | SRR1168984 | MDR-TB | lineage4.2.1 | None | SRR1169076 | MDR-TB | lineage4.2.1 | None | SRR1169152 | MDR-TB | lineage4.2.1 | None | SRR1169179 | MDR-TB | lineage4.2.1 | None | SRR1181046 | Sensitive | lineage4.8 | None | SRR12142427 | MDR-TB | lineage2.2.2 | None | SRR14164790 | Other | lineage4.1.2.1 | None | SRR1169013 | MDR-TB | lineage4.2.1 | None | SRR1169099 | MDR-TB | lineage4.2.1 | None | SRR1169165 | MDR-TB | lineage4.2.1 | None | SRR12142420 | MDR-TB | lineage2.2.2 | None | SRR14164416 | Other | lineage4.1.2.1 | None | SRR14164581 | Sensitive | lineage4.2.1 | None | SRR14782386 | Sensitive | lineage4.8 | None | SRR14782071 | Sensitive | lineage4.8 | None | SRR14782306 | MDR-TB | lineage4.2.1 | None | SRR14782324 | MDR-TB | lineage4.2.1 | None | SRR14801809 | MDR-TB | lineage4.2.1 | None | SRR14782651 | Pre-XDR-TB | lineage4.2.1 | None | SRR14782774 | Sensitive | lineage4.3.3 | None | SRR14801605 | MDR-TB | lineage4.2.1 | None | SRR14782429 | Pre-XDR-TB | lineage4.2.1 | None | SRR14801453 | Sensitive | lineage4.8 | None | SRR14801859 | Sensitive | lineage4.8 | None | SRR14802144 | MDR-TB | lineage4.2.1 | None | SRR14807562 | Sensitive | lineage4.8 | None | SRR17729368 | Sensitive | lineage1.1.1 | None | SRR14807536 | Sensitive | lineage4.8 | None | SRR17406742 | Sensitive | lineage4.8 | None | SRR17729384 | Sensitive | lineage1.1.1 | None | SRR17729381 | Sensitive | lineage1.1.1 | None | SRR17729385 | Sensitive | lineage1.1.1 | None | SRR17729377 | Sensitive | lineage1.1.1 | None | SRR17729367 | Sensitive | lineage1.1.1 | None | SRR18213772 | Sensitive | lineage4.2.2.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18213722 | HR-TB | lineage4.2.2.2 | None | SRR2100925 | MDR-TB | lineage4.2.2.2 | None | SRR2100342 | HR-TB | lineage4.2.2.2 | None | SRR18213898 | Sensitive | lineage4.8 | None | SRR2100823 | HR-TB | lineage4.2.2.2 | None | SRR2101234 | Sensitive | lineage4.8 | None | ERR11050924 | Sensitive | lineage4.5 | None | SRR21276980 | Sensitive | lineage2.2.1 | None | SRR21291160 | Sensitive | lineage4.5 | None | SRR22175183 | MDR-TB | lineage4.8 | None | SRR22528534 | MDR-TB | lineage4.3.3 | None | SRR22536485 | Pre-XDR-TB | lineage4.3.3 | None | SRR22528546 | MDR-TB | lineage4.1.2.1 | None | ERR11068045 | Sensitive | lineage4.2.1 | None | SRR22536481 | Pre-XDR-TB | lineage4.3.3 | None | SRR22536483 | MDR-TB | lineage4.1.2.1 | None | SRR23861808 | HR-TB | lineage4.2.1 | None | ERR11068234 | Sensitive | lineage4.8 | None | ERR11080872 | Sensitive | lineage4.1.2.1 | None | ERR11082728 | Pre-XDR-TB | lineage4.2.1 | None | SRR23861732 | Sensitive | lineage4.2.1 | None | ERR11068188 | HR-TB | lineage4.8 | None | ERR11081118 | HR-TB | lineage4.2.2.2 | None | ERR11082798 | Sensitive | lineage4.2.1 | None | SRR23861798 | Sensitive | lineage4.2.1 | None | SRR23861963 | HR-TB | lineage4.2.1 | None | SRR23861818 | HR-TB | lineage4.8 | None | SRR23861857 | RR-TB | lineage4.2.1 | None | SRR23862034 | Sensitive | lineage4.2.1.1 | None | SRR23861977 | Sensitive | lineage4.8 | None | SRR23862077 | Sensitive | lineage4.8 | None | SRR23862054 | HR-TB | lineage4.2.1 | None | SRR23862062 | Sensitive | lineage4.2.1 | None | ERR4813733 | RR-TB | lineage4 | None | SRR21887687 | Pre-XDR-TB | lineage2.2.1 | None | SRR23862144 | HR-TB | lineage4.2.1 | None | SRR2469380 | HR-TB | lineage4.2.2.2 | None | SRR23691400 | MDR-TB | lineage2.2.1 | None | SRR23691425 | MDR-TB | lineage2.2.1 | None | ERR4812833 | MDR-TB | lineage4.1.1 | pe | ERR4812803 | MDR-TB | lineage4.1.1 | None | ERR4812816 | MDR-TB | lineage4.1.1 | None | ERR1577252 | HR-TB | lineage2.2.1 | None | SAMN02584678 | MDR-TB | lineage4.2.1 | md | ERR4813107 | Pre-XDR-TB | lineage4 | None | ERR4813003 | MDR-TB | lineage4.1.1 | None | ERR4813306 | MDR-TB | lineage4 | pe | SAMN02584622 | MDR-TB | lineage4.2.1 | md | ERR4813531 | Sensitive | lineage4 | pe | ERR4813660 | MDR-TB | lineage4 | None | ERR4813325 | MDR-TB | lineage4.1.1 | None | ERR4813333 | MDR-TB | lineage4 | None | ERR2184499 | Sensitive | lineage4.1.2.1 | pe | ERR4817325 | Sensitive | lineage4.1.2.1 | gb | SAMN02584599 | MDR-TB | lineage4.2.1 | md | SAMN02584635 | MDR-TB | lineage4.2.1 | md | SAMN02584675 | MDR-TB | lineage4.2.1 | md | ERR2184596 | HR-TB | lineage4 | pe | SAMN02584671 | MDR-TB | lineage4.2.1 | md | ERR234561 | Sensitive | lineage4.2.1 | ru | ERR2510168 | MDR-TB | lineage4 | pe | ERR11067175 | Sensitive | lineage4.2.1 | None | ERR2516509 | MDR-TB | lineage4 | pe | ERR2516944 | MDR-TB | lineage4.2.2.2 | gb | ERR2516503 | XDR-TB | lineage4 | pe | ERR2516892 | HR-TB | lineage1.2.1.2.1 | gb | ERR2516472 | MDR-TB | lineage4 | pe | ERR2516667 | MDR-TB | lineage4 | pe | ERR2516548 | MDR-TB | lineage4 | pe | SAMN02414874 | MDR-TB | lineage4.2.2.2 | se | SAMN02414955 | MDR-TB | lineage1.2.1.1 | se | ERR2516645 | Pre-XDR-TB | lineage4 | pe | ERR2653000 | Other | lineage4.1.2.1 | None | ERR2516789 | HR-TB | lineage1.2.1.2.1 | gb | SRR23339985 | MDR-TB | lineage4.2.1 | None | SRR23310833 | MDR-TB | lineage4.2.1 | None | SRR23310865 | MDR-TB | lineage4.2.1 | None | SRR23339941 | Sensitive | lineage4.8 | None | ERR278538 | MDR-TB | lineage4.2.2.2 | None | SRR23340034 | MDR-TB | lineage4.2.1 | None | SRR23340103 | MDR-TB | lineage4.2.1 | None | SRR23340137 | MDR-TB | lineage4.2.1 | None | SRR23340155 | MDR-TB | lineage4.2.1 | None | SRR23340010 | Sensitive | lineage4.1.2 | None | SRR23340054 | MDR-TB | lineage4.2.1 | None | ERR2815571 | Other | La1.7.1 | None | ERR266608 | HR-TB | lineage4.2.2.2 | None | ERR270713 | HR-TB | lineage4.2.2.2 | None | SAMN02628509 | MDR-TB | lineage4.2.1 | ir | ERR2864224 | MDR-TB | lineage4.3.2 | pt | ERR2843474 | HR-TB | lineage4.4 | None | ERR2864248 | MDR-TB | lineage4.2.1 | pt | ERR4828465 | HR-TB | lineage4.4 | vn |
|---|
