lineage | Count |
---|---|
lineage4.8 | 16 |
lineage4.3.2 | 2 |
lineage2.2.1 | 13 |
lineage4.4.1.1 | 3 |
lineage4.1.2.1 | 10 |
lineage4.2.1 | 4 |
lineage4.3.3 | 4 |
lineage3 | 2 |
lineage4.3.2.1 | 1 |
La1.8.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.2.1.1 | 1 |
lineage4.7 | 2 |
lineage2.2.2 | 2 |
lineage4.6.2.2 | 2 |
lineage6.3.1 | 1 |
lineage2.2 | 1 |
lineage1.1.1 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 68 |
ID | Drug resistance | Lineage | Country iso2 | ERR11050188 | Other | lineage4.8 | None | ERR11050006 | Sensitive | lineage4.3.2 | None | SRR14781947 | MDR-TB | lineage2.2.1 | None | ERR11050471 | MDR-TB | lineage4.4.1.1 | None | ERR11050550 | Sensitive | lineage4.1.2.1 | None | ERR11050367 | HR-TB | lineage4.1.2.1 | None | ERR11050500 | Sensitive | lineage4.1.2.1 | None | SRR14782136 | Pre-XDR-TB | lineage4.2.1 | None | SRR14782786 | Sensitive | lineage4.3.3 | None | SRR14782266 | Sensitive | lineage2.2.1 | None | SRR14782646 | Other | lineage4.3.3 | None | SRR14782581 | Sensitive | lineage2.2.1 | None | SRR14782616 | Sensitive | lineage2.2.1 | None | SRR14801411 | Sensitive | lineage2.2.1 | None | ERR11050593 | Sensitive | lineage4.8 | None | SRR14801709 | MDR-TB | lineage4.2.1 | None | ERR11050634 | Other | lineage3 | None | SRR16156773 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR16088447 | Sensitive | lineage4.8 | None | SRR16088439 | Sensitive | lineage4.8 | None | SRR16088453 | Sensitive | lineage4.1.2.1 | None | SRR18714795 | Sensitive | lineage4.8 | None | ERR11050725 | Sensitive | lineage4.8 | None | SRR1791889 | Other | La1.8.1 | None | ERR11050693 | Sensitive | lineage4.1.2.1 | None | SRR18715011 | Sensitive | lineage4.1.2.1 | None | SRR18714813 | Sensitive | lineage4.8 | None | SRR18714946 | MDR-TB | lineage4.3.4.2 | None | SRR18715140 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715118 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR11050833 | Sensitive | lineage4.8 | None | SRR18715290 | Sensitive | lineage2.2.1 | None | ERR11050835 | Sensitive | lineage2.2.1 | None | ERR11068917 | Sensitive | lineage4.1.2.1 | None | ERR11050914 | Sensitive | lineage2.2.1 | None | ERR11067925 | Sensitive | lineage4.7 | None | ERR11081086 | Sensitive | lineage4.1.2.1 | None | SRR23861825 | Sensitive | lineage2.2.1 | None | SRR23861905 | Sensitive | lineage4.8 | None | SRR23861888 | Sensitive | lineage4.8 | None | SRR23861983 | Other | lineage2.2.1 | None | SRR23861984 | Sensitive | lineage4.4.1.1 | None | SRR23861966 | RR-TB | lineage4.8 | None | SRR23861988 | RR-TB | lineage2.2.1 | None | SRR23861987 | Sensitive | lineage4.3.3 | None | SRR23862167 | Other | lineage4.8 | None | SRR23861990 | Sensitive | lineage4.8 | None | SRR23862142 | Sensitive | lineage4.1.2.1 | None | SRR23938700 | Sensitive | lineage2.2.1 | None | SRR23862189 | Sensitive | lineage4.3.3 | None | SRR23311015 | MDR-TB | lineage4.2.1 | None | SRR25515239 | Sensitive | lineage2.2.2 | None | ERR11067196 | Sensitive | lineage4.6.2.2 | None | SRR25534565 | Sensitive | lineage2.2.2 | None | SRR998740 | Sensitive | lineage6.3.1 | None | SRR23311021 | MDR-TB | lineage4.2.1 | None | SRR23311022 | MDR-TB | lineage2.2 | None | ERR11067589 | Sensitive | lineage4.6.2.2 | None | ERR11067573 | Sensitive | lineage4.8 | None | ERR11043273 | Sensitive | lineage4.7 | None | ERR10969255 | Sensitive | lineage4.3.2 | None | ERR11043173 | Sensitive | lineage4.1.2.1 | None | ERR11043725 | Sensitive | lineage1.1.1 | None | ERR11043308 | Sensitive | lineage4.5 | None | ERR11043782 | Sensitive | lineage4.8 | None | ERR4553599 | MDR-TB | lineage4.4.1.1 | None | ERR11044864 | Sensitive | lineage3 | None | ERR4553842 | MDR-TB | lineage4.8 | None |
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