Rv3457c - c.-84delC
Drug resistance types
44 Sensitive
0 RR-TB
3 HR-TB
15 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1 | 28 |
| lineage4.2.1.1 | 3 |
| La1.7.1 | 4 |
| lineage4.5 | 1 |
| lineage5.3 | 4 |
| lineage4.8 | 1 |
| lineage3 | 5 |
| lineage3.1.2 | 3 |
| lineage2.2.1 | 15 |
| La1.2 | 2 |
| lineage4.4.1.1 | 3 |
| lineage3.1.1 | 1 |
| lineage2.2.2 | 3 |
| lineage1.1.1.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.4.2 | 2 |
| lineage1.2.1.1 | 2 |
| lineage1.1.2 | 1 |
| lineage1.1.1 | 6 |
| lineage1.2.2.1 | 1 |
| lineage4.9 | 1 |
| La1.2;La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 90 |
Geographic prevalence
Country level data for this variant is available for 25 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1166817 | MDR-TB | lineage3.1 | None | ERR386954 | Sensitive | lineage4.2.1.1 | None | SRR23961444 | Other | La1.7.1 | None | SRR9613544 | Sensitive | lineage4.5 | None | ERR028345 | Sensitive | lineage5.3 | None | ERR4799203 | Pre-XDR-TB | lineage4.8 | in | SRR26111897 | Other | lineage3 | None | ERR123912 | Sensitive | lineage3 | None | ERR439983 | HR-TB | lineage5.3 | None | ERR1034685 | HR-TB | lineage3.1 | in | SRR2100154 | Sensitive | lineage3 | None | ERR2514835 | Sensitive | lineage3.1.2 | gb | ERR1215462 | Sensitive | lineage5.3 | gh | SRR2100966 | Sensitive | lineage4.2.1.1 | None | SRR22175196 | Pre-XDR-TB | lineage3.1 | None | SRR28351329 | Pre-XDR-TB | lineage2.2.1 | None | ERR12976133 | Other | La1.2 | None | SRR28351333 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799969 | Sensitive | lineage3.1 | in | SRR26112681 | Sensitive | lineage4.4.1.1 | None | ERR5979410 | Sensitive | lineage3.1.1 | None | SRR12142320 | Sensitive | lineage2.2.2 | None | SRR26399660 | Other | lineage1.1.1.1 | None | ERR386777 | Sensitive | lineage3.1 | None | SRR25340843 | Other | lineage4.1.2 | None | SRR15364430 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824634 | MDR-TB | lineage4.4.2 | cn | ERR234158 | Sensitive | lineage3.1 | None | ERR4799058 | MDR-TB | lineage3.1.2 | in | SAMN02414990 | MDR-TB | lineage3.1 | se | SRR23961433 | Other | La1.7.1 | None | ERR229961 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4830658 | Pre-XDR-TB | lineage2.2.1 | np | SRR1165585 | MDR-TB | lineage1.2.1.1 | None | ERR10225521 | Sensitive | lineage4.4.1.1 | None | SRR1165373 | MDR-TB | lineage3.1 | None | ERR4822609 | Pre-XDR-TB | lineage3.1 | de | SRR2100620 | Sensitive | lineage3.1 | None | ERR2514392 | Sensitive | lineage1.1.2 | gb | ERR11081912 | MDR-TB | lineage3.1 | None | ERR11082973 | Sensitive | lineage4.4.1.1 | None | SRR17729367 | Sensitive | lineage1.1.1 | None | ERR5979450 | Sensitive | lineage3.1 | None | SRR28044401 | Sensitive | lineage3.1.2 | None | SRR28045970 | MDR-TB | lineage2.2.1 | None | SRR28045914 | Other | lineage1.2.2.1 | None | ERR5897107 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800201 | Pre-XDR-TB | lineage3.1 | in | ERR11082631 | Sensitive | lineage4.9 | None | SRR17729377 | Sensitive | lineage1.1.1 | None | SRR10305683 | Sensitive | lineage2.2.1 | None | ERR5979456 | Sensitive | lineage3.1 | None | ERR2512833 | Sensitive | lineage3.1 | gb | SRR13199721 | Other | La1.7.1 | None | SRR17729368 | Sensitive | lineage1.1.1 | None | SRR21277658 | Sensitive | lineage4.4.2 | None | ERR4830324 | Other | lineage1.1.1.1 | vn | ERR351845 | Sensitive | lineage3.1 | None | ERR5979435 | Pre-XDR-TB | lineage3.1 | None | SRR23961460 | Other | La1.7.1 | None | SRR17729381 | Sensitive | lineage1.1.1 | None | SRR17729385 | Sensitive | lineage1.1.1 | None | SRR1167069 | MDR-TB | lineage3.1 | None | DRR474030 | Sensitive | lineage2.2.1 | None | SRR17729384 | Sensitive | lineage1.1.1 | None | SAMN02414955 | MDR-TB | lineage1.2.1.1 | se | SRR21887758 | MDR-TB | lineage2.2.2 | None | SRR1162758 | MDR-TB | lineage3.1 | None | SRR23961556 | Other | La1.2;La1.7.1 | None | ERR12976173 | Other | La1.2 | None | SRR28045275 | Sensitive | lineage3.1 | None | ERR4799965 | Pre-XDR-TB | lineage3.1 | in | ERR234204 | Sensitive | lineage5.3 | gh | ERR5979428 | MDR-TB | lineage3.1 | None | ERR11043545 | MDR-TB | lineage3.1 | None | SRR1723445 | Sensitive | lineage2.2.1 | cn | ERR2513053 | Sensitive | lineage3 | gb | ERR228266 | Sensitive | lineage3.1 | None | ERR4797272 | Pre-XDR-TB | lineage2.2.1 | in | ERR2514026 | Sensitive | lineage3.1 | gb | SRR2101184 | Sensitive | lineage3.1 | None | ERR278595 | Sensitive | lineage4.2.1.1 | None | ERR2512995 | Sensitive | lineage3 | gb | DRR474118 | Other | lineage2.2.1 | None | SRR25515722 | Sensitive | lineage2.2.1 | None | SRR10040401 | MDR-TB | lineage2.2.2 | None | ERR4799551 | Pre-XDR-TB | lineage3.1 | None | DRR474117 | Other | lineage2.2.1 | None | ERR4799061 | Sensitive | lineage3.1 | in | SRR5341292 | HR-TB | lineage2.2.1 | in |
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