Rv3457c - c.-84delC
Drug resistance types
103 Sensitive
0 RR-TB
9 HR-TB
30 MDR-TB
26 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2.2 | 2 |
| lineage3.1 | 48 |
| lineage1.2.1.1 | 6 |
| La1.7.1 | 4 |
| lineage2.2.2 | 2 |
| lineage4.8 | 15 |
| lineage2.2.1 | 20 |
| lineage4.2.1 | 1 |
| lineage4.1.2.1 | 19 |
| lineage3 | 7 |
| lineage1.1.1 | 9 |
| lineage4.1.2 | 3 |
| lineage4.1.2;lineage2.2.1 | 1 |
| lineage4.2.1.1 | 4 |
| lineage4.4.1.1 | 11 |
| lineage4.4.2 | 2 |
| lineage4.9 | 1 |
| lineage1.1.2 | 4 |
| lineage5.3 | 4 |
| lineage3.1.2 | 5 |
| lineage4.3.3 | 1 |
| lineage2.2.1;lineage1.1.1.1 | 1 |
| lineage1.1.1.1 | 2 |
| La1.8.2 | 1 |
| lineage4.5 | 1 |
| lineage4.1 | 1 |
| lineage4.8;lineage3.1 | 1 |
| La1.8.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.2.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 182 |
Geographic prevalence
Country level data for this variant is available for 49 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11050333 | Sensitive | lineage4.2.2.2 | None | SRR1162758 | MDR-TB | lineage3.1 | None | SRR1163288 | MDR-TB | lineage1.2.1.1 | None | SRR13199741 | Other | La1.7.1 | None | SRR1165373 | MDR-TB | lineage3.1 | None | SRR1165585 | MDR-TB | lineage1.2.1.1 | None | SRR1167069 | MDR-TB | lineage3.1 | None | SRR12142320 | Sensitive | lineage2.2.2 | None | SRR1163345 | MDR-TB | lineage1.2.1.1 | None | SRR1165515 | MDR-TB | lineage1.2.1.1 | None | SRR1166817 | MDR-TB | lineage3.1 | None | SRR14801621 | Sensitive | lineage4.8 | None | SRR13199721 | Other | La1.7.1 | None | SRR14782716 | Other | lineage2.2.1 | None | SRR16088259 | Sensitive | lineage4.8 | None | SRR14801745 | HR-TB | lineage4.2.1 | None | SRR14807551 | Sensitive | lineage4.1.2.1 | None | SRR15364430 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050651 | Sensitive | lineage3 | None | SRR16370450 | HR-TB | lineage1.1.1 | None | SRR16088317 | Sensitive | lineage4.1.2 | None | SRR16088522 | Sensitive | lineage4.1.2 | None | SRR16088382 | Other | lineage4.8 | None | SRR17729368 | Sensitive | lineage1.1.1 | None | SRR17729381 | Sensitive | lineage1.1.1 | None | SRR17729367 | Sensitive | lineage1.1.1 | None | SRR17729384 | Sensitive | lineage1.1.1 | None | SRR2100718 | Sensitive | lineage4.8 | None | SRR17729385 | Sensitive | lineage1.1.1 | None | SRR17729377 | Sensitive | lineage1.1.1 | None | SRR18213898 | Sensitive | lineage4.8 | None | SRR18715129 | MDR-TB | lineage4.1.2;lineage2.2.1 | None | ERR11050806 | Sensitive | lineage4.1.2.1 | None | SRR2100154 | Sensitive | lineage3 | None | SRR2100620 | Sensitive | lineage3.1 | None | SRR18213957 | Sensitive | lineage4.2.1.1 | None | ERR11050756 | Other | lineage3 | None | SRR18715391 | Sensitive | lineage4.8 | None | SRR19303912 | Sensitive | lineage4.8 | None | SRR2100966 | Sensitive | lineage4.2.1.1 | None | SRR21277178 | Sensitive | lineage2.2.1 | None | SRR21239909 | HR-TB | lineage4.4.1.1 | None | SRR21240128 | HR-TB | lineage4.4.1.1 | None | SRR2101184 | Sensitive | lineage3.1 | None | ERR11068092 | Other | lineage3.1 | None | SRR21277658 | Sensitive | lineage4.4.2 | None | ERR11067823 | Sensitive | lineage4.1.2.1 | None | SRR22175196 | Pre-XDR-TB | lineage3.1 | None | ERR11080981 | Sensitive | lineage4.4.1.1 | None | ERR11068317 | Sensitive | lineage4.1.2.1 | None | ERR11081225 | Pre-XDR-TB | lineage3.1 | None | ERR11081046 | Sensitive | lineage4.1.2.1 | None | ERR11081490 | Sensitive | lineage4.8 | None | ERR11081912 | MDR-TB | lineage3.1 | None | ERR11081787 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11081975 | Sensitive | lineage4.1.2.1 | None | SRR21887758 | MDR-TB | lineage2.2.2 | None | ERR11082631 | Sensitive | lineage4.9 | None | ERR11082973 | Sensitive | lineage4.4.1.1 | None | ERR11083088 | Sensitive | lineage4.1.2.1 | None | ERR11083117 | Sensitive | lineage3.1 | None | ERR11082759 | Sensitive | lineage4.4.1.1 | None | SRR1723445 | Sensitive | lineage2.2.1 | cn | ERR11050986 | Sensitive | lineage4.8 | None | ERR4814935 | Sensitive | lineage4.1.2.1 | gb | ERR2677437 | MDR-TB | lineage3.1 | de | ERR228266 | Sensitive | lineage3.1 | None | ERR11049661 | Sensitive | lineage4.1.2.1 | None | ERR2512995 | Sensitive | lineage3 | gb | ERR229961 | Pre-XDR-TB | lineage2.2.1 | ru | ERR11049282 | Sensitive | lineage1.1.2 | None | ERR2513053 | Sensitive | lineage3 | gb | ERR234155 | Sensitive | lineage1.1.1 | None | ERR230094 | Sensitive | lineage4.8 | None | ERR234158 | Sensitive | lineage3.1 | None | ERR234204 | Sensitive | lineage5.3 | gh | ERR2514013 | Sensitive | lineage3.1 | gb | ERR11049254 | Sensitive | lineage4.1.2.1 | None | ERR2512833 | Sensitive | lineage3.1 | gb | ERR2514392 | Sensitive | lineage1.1.2 | gb | ERR2514026 | Sensitive | lineage3.1 | gb | ERR11049705 | Sensitive | lineage4.8 | None | ERR11049327 | Sensitive | lineage4.8 | None | SAMN02414955 | MDR-TB | lineage1.2.1.1 | se | ERR2514835 | Sensitive | lineage3.1.2 | gb | SRR5341292 | Pre-XDR-TB | lineage2.2.1 | in | ERR4822392 | Pre-XDR-TB | lineage2.2.1 | kg | SRR6046083 | Sensitive | lineage3.1.2 | gb | ERR4822609 | Pre-XDR-TB | lineage3.1 | de | ERR4822610 | Pre-XDR-TB | lineage3.1 | de | ERR4822606 | Pre-XDR-TB | lineage3.1 | de | ERR2815562 | Other | La1.7.1 | None | ERR278595 | Sensitive | lineage4.2.1.1 | None | ERR2677434 | MDR-TB | lineage3.1 | de | ERR2677447 | MDR-TB | lineage4.2.2.2 | de | ERR4830049 | HR-TB | lineage4.3.3 | None | ERR4830186 | Sensitive | lineage2.2.1 | vn | ERR4830360 | Sensitive | lineage2.2.1;lineage1.1.1.1 | vn | ERR11049760 | Sensitive | lineage4.1.2.1 | None | SAMN02414990 | MDR-TB | lineage3.1 | se | SRR6257006 | MDR-TB | lineage2.2.1 | None | ERR4830944 | Pre-XDR-TB | lineage2.2.1 | np | SRR6824634 | MDR-TB | lineage4.4.2 | cn | ERR2815571 | Other | La1.7.1 | None | ERR4830658 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830324 | Other | lineage1.1.1.1 | vn | SRR6480550 | Sensitive | lineage2.2.1 | None | ERR11067514 | Other | La1.8.2 | None | ERR10225521 | Sensitive | lineage4.4.1.1 | None | SRR9613544 | Sensitive | lineage4.5 | None | ERR028338 | Sensitive | lineage1.1.1 | None | ERR11067544 | Other | lineage3.1 | None | ERR028345 | Sensitive | lineage5.3 | None | ERR1034690 | MDR-TB | lineage3.1.2 | in | ERR11043514 | Sensitive | lineage4.1.2 | None | ERR1034685 | HR-TB | lineage3.1 | in | ERR10680176 | MDR-TB | lineage4.1.2.1 | None | ERR10748398 | MDR-TB | lineage2.2.1 | None | ERR11043097 | Sensitive | lineage4.1.2.1 | None | ERR11043165 | Sensitive | lineage4.1.2.1 | None | ERR10465939 | Sensitive | lineage3 | None | ERR11043229 | Sensitive | lineage3.1 | None | ERR11043462 | Sensitive | lineage4.1.2.1 | None | ERR11043545 | MDR-TB | lineage3.1 | None | ERR11044242 | Sensitive | lineage4.4.1.1 | None | ERR11043756 | MDR-TB | lineage3.1 | None | ERR11044049 | Other | lineage3.1 | None | ERR11044001 | MDR-TB | lineage1.1.2 | None | ERR11044461 | Sensitive | lineage3.1 | None | ERR11044558 | Sensitive | lineage4.1 | None | ERR1215462 | Sensitive | lineage5.3 | gh | ERR11044653 | HR-TB | lineage4.8 | None | ERR11044798 | Sensitive | lineage4.8 | None | ERR123912 | Sensitive | lineage3 | None | ERR351845 | Sensitive | lineage3.1 | None | ERR3323728 | Sensitive | lineage4.1.2.1 | None | ERR386777 | Sensitive | lineage3.1 | None | ERR4796669 | HR-TB | lineage4.8;lineage3.1 | in | ERR386954 | Sensitive | lineage4.2.1.1 | None | ERR4188214 | Other | La1.8.1 | None | ERR4276907 | Pre-XDR-TB | lineage3.1 | None | ERR11049490 | Sensitive | lineage4.6.2.2 | None | ERR4553976 | Pre-XDR-TB | lineage3.1 | None | ERR4797079 | Sensitive | lineage3.1.2 | in | ERR4797272 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797148 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797518 | MDR-TB | lineage3.1 | in | ERR4797514 | MDR-TB | lineage3.1 | in | ERR4797687 | MDR-TB | lineage3.1 | in | ERR4797649 | Sensitive | lineage1.2.2.2 | in | ERR4799969 | Sensitive | lineage3.1 | in | ERR4798542 | Pre-XDR-TB | lineage3.1 | in | ERR4798885 | Sensitive | lineage1.1.2 | in | ERR4799058 | MDR-TB | lineage3.1.2 | in | ERR4799203 | Pre-XDR-TB | lineage4.8 | in | ERR4799551 | Pre-XDR-TB | lineage3.1 | None | ERR4799965 | Pre-XDR-TB | lineage3.1 | in | ERR4797871 | Pre-XDR-TB | lineage3.1 | in | ERR4799061 | Sensitive | lineage3.1 | in | ERR11049855 | Sensitive | lineage4.2.2.1 | None | ERR4800201 | Pre-XDR-TB | lineage3.1 | in | ERR11049565 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049829 | Pre-XDR-TB | lineage2.2.1 | None | ERR5897107 | Pre-XDR-TB | lineage2.2.1 | None | ERR5979441 | MDR-TB | lineage3.1 | None | ERR5979428 | MDR-TB | lineage3.1 | None | ERR5979410 | Sensitive | lineage3.1.1 | None | ERR5979435 | Pre-XDR-TB | lineage3.1 | None | ERR5979456 | Sensitive | lineage3.1 | None | ERR5979450 | Sensitive | lineage3.1 | None | ERR7902684 | Sensitive | lineage1.2.1.1 | None | ERR702419 | Sensitive | lineage5.3 | gh | ERR11050034 | Sensitive | lineage4.1.2.1 | None | ERR9030399 | Sensitive | lineage4.4.1.1 | None | ERR9030502 | Sensitive | lineage4.4.1.1 | None | ERR9119198 | Other | lineage1.1.1.1 | None | ERR9119329 | Sensitive | lineage2.2.1 | None | SRR10869151 | HR-TB | lineage4.1.1.3 | None | ERR9030487 | Sensitive | lineage4.4.1.1 | None | ERR9030494 | Sensitive | lineage4.4.1.1 | None | ERR11050108 | Sensitive | lineage4.1.2.1 | None | SRR10305683 | Sensitive | lineage2.2.1 | None |
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