lineage | Count |
---|---|
lineage6.3.1 | 1 |
lineage4.7 | 1 |
lineage4.3.4.1 | 1 |
lineage2.2.1 | 22 |
lineage3 | 2 |
lineage4.2.1 | 8 |
lineage4.4.1.1 | 4 |
lineage4.1.2.1 | 16 |
lineage4.8 | 25 |
lineage4.2.1.1 | 6 |
lineage4.1.2 | 2 |
La1.2.BCG | 1 |
lineage4.6.2.2 | 2 |
lineage4.3.3 | 12 |
lineage4.2.1;lineage2.2.1 | 1 |
lineage2.2 | 1 |
4 | |
lineage4.9 | 1 |
lineage4.5 | 1 |
lineage3.1.1 | 1 |
lineage1.1.2 | 1 |
lineage4.3.4.2 | 1 |
spoligotype | Count |
---|---|
None | 114 |
ID | Drug resistance | Lineage | Country iso2 | ERR11050481 | Sensitive | lineage6.3.1 | None | ERR11050524 | Sensitive | lineage4.7 | None | ERR11050516 | Sensitive | lineage4.3.4.1 | None | SRR13232628 | MDR-TB | lineage2.2.1 | None | ERR11050528 | Sensitive | lineage3 | None | SRR14781855 | MDR-TB | lineage4.2.1 | None | ERR11050564 | Sensitive | lineage4.4.1.1 | None | SRR14781931 | Sensitive | lineage4.2.1 | None | SRR14781945 | Sensitive | lineage4.1.2.1 | None | SRR14781932 | Sensitive | lineage4.8 | None | SRR14781968 | Sensitive | lineage2.2.1 | None | SRR14782182 | Other | lineage4.2.1.1 | None | SRR14782468 | Sensitive | lineage4.1.2 | None | SRR14782203 | Sensitive | lineage4.1.2.1 | None | SRR14782268 | Other | La1.2.BCG | None | SRR14782293 | Other | lineage4.8 | None | SRR14782326 | Sensitive | lineage4.8 | None | SRR14782348 | Other | lineage4.2.1.1 | None | SRR14782455 | HR-TB | lineage2.2.1 | None | SRR14782497 | Sensitive | lineage4.1.2.1 | None | SRR14782533 | Sensitive | lineage4.2.1.1 | None | SRR14782502 | Sensitive | lineage4.1.2.1 | None | SRR14782498 | Sensitive | lineage2.2.1 | None | ERR11050574 | Sensitive | lineage4.6.2.2 | None | SRR14782579 | HR-TB | lineage4.2.1.1 | None | SRR14782573 | Sensitive | lineage4.2.1.1 | None | SRR14782543 | Sensitive | lineage4.8 | None | SRR14782553 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782585 | Sensitive | lineage4.8 | None | SRR14782587 | Sensitive | lineage4.8 | None | SRR14782610 | Sensitive | lineage4.8 | None | SRR14782603 | Sensitive | lineage4.2.1 | None | SRR14782662 | Sensitive | lineage4.1.2.1 | None | SRR14782605 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782786 | Sensitive | lineage4.3.3 | None | SRR14782663 | Sensitive | lineage2.2.1 | None | SRR14801662 | Sensitive | lineage2.2.1 | None | SRR14782809 | Sensitive | lineage4.8 | None | SRR14801352 | Sensitive | lineage4.8 | None | SRR14801465 | Sensitive | lineage4.3.3 | None | SRR14801532 | Sensitive | lineage4.8 | None | SRR14801589 | Sensitive | lineage4.1.2.1 | None | SRR14801710 | Other | lineage2.2.1 | None | SRR14801687 | MDR-TB | lineage2.2.1 | None | SRR14801748 | MDR-TB | lineage4.2.1 | None | SRR14801709 | MDR-TB | lineage4.2.1 | None | SRR14801981 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR14801855 | HR-TB | lineage4.3.3 | None | SRR14801786 | Sensitive | lineage4.8 | None | SRR14801853 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801895 | Sensitive | lineage4.3.3 | None | SRR14802007 | HR-TB | lineage4.1.2.1 | None | ERR11050654 | Sensitive | lineage4.1.2.1 | None | SRR14802150 | MDR-TB | lineage4.2.1 | None | ERR11050621 | Sensitive | lineage4.1.2 | None | ERR11050599 | Sensitive | lineage4.3.3 | None | SRR16088136 | Sensitive | lineage4.2.1 | None | ERR11050669 | Sensitive | lineage4.8 | None | SRR16088101 | Sensitive | lineage4.1.2.1 | None | SRR16088245 | Sensitive | lineage4.8 | None | SRR16088129 | HR-TB | lineage4.3.3 | None | SRR16088228 | Other | lineage4.8 | None | SRR16088253 | Sensitive | lineage4.8 | None | ERR11050676 | Sensitive | lineage4.8 | None | SRR16088437 | Other | lineage2.2.1 | None | SRR16088450 | Sensitive | lineage4.8 | None | SRR16088452 | Other | lineage2.2.1 | None | SRR18714808 | Sensitive | lineage4.3.3 | None | SRR18715408 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714924 | MDR-TB | lineage2.2.1 | None | SRR18714979 | Other | lineage4.8 | None | SRR18715202 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714908 | Sensitive | lineage2.2.1 | None | SRR18714913 | MDR-TB | lineage2.2.1 | None | SRR18715006 | Sensitive | lineage4.8 | None | SRR18715269 | Other | lineage4.8 | None | ERR11068493 | Sensitive | lineage4.8 | None | SRR23861885 | Sensitive | lineage2.2.1 | None | ERR11083078 | Sensitive | lineage2.2 | None | SRR23861728 | Sensitive | lineage4.4.1.1 | None | SRR23861781 | Sensitive | lineage4.1.2.1 | None | SRR23938684 | Sensitive | lineage4.3.3 | None | SRR23862090 | Sensitive | lineage4.3.3 | None | SRR23862142 | Sensitive | lineage4.1.2.1 | None | SRR23862173 | Sensitive | lineage4.2.1.1 | None | SRR23861987 | Sensitive | lineage4.3.3 | None | SRR23861990 | Sensitive | lineage4.8 | None | SRR23862189 | Sensitive | lineage4.3.3 | None | ERR3597005 | Sensitive | None | ERR11049747 | Sensitive | lineage4.9 | None | ERR11044489 | HR-TB | lineage2.2.1 | None | ERR11044761 | Sensitive | lineage4.4.1.1 | None | ERR11049398 | Other | lineage4.2.1 | None | ERR11049639 | Sensitive | lineage4.1.2.1 | None | ERR11049712 | Sensitive | lineage4.6.2.2 | None | ERR11044884 | Sensitive | lineage4.8 | None | ERR3597001 | Sensitive | None | ERR3597002 | Sensitive | None | ERR11049463 | Sensitive | lineage4.1.2.1 | None | ERR3597007 | Sensitive | None | ERR11049445 | Sensitive | lineage4.1.2.1 | None | ERR11050026 | Sensitive | lineage4.1.2.1 | None | ERR11049936 | Sensitive | lineage2.2.1 | None | ERR11049469 | Sensitive | lineage4.4.1.1 | None | ERR11049883 | Sensitive | lineage4.1.2.1 | None | ERR11049998 | Sensitive | lineage3 | None | ERR11050044 | Other | lineage2.2.1 | None | ERR11050035 | Sensitive | lineage4.8 | None | ERR11050048 | Sensitive | lineage4.8 | None | ERR11050107 | Sensitive | lineage4.5 | None | SRR10808551 | Other | lineage4.3.3 | None | ERR11050049 | Sensitive | lineage3.1.1 | None | ERR11050163 | Other | lineage1.1.2 | None | ERR11050210 | MDR-TB | lineage4.3.4.2 | None |
---|