lineage | Count |
---|---|
lineage2.2.1 | 28 |
lineage3.1.2 | 1 |
lineage3 | 4 |
lineage4.6.1.1 | 1 |
lineage4.5 | 1 |
lineage2.2.1.1 | 4 |
lineage4.3.4.2.1 | 8 |
lineage4.1.1.3 | 1 |
lineage1.1.1 | 1 |
lineage4.1.1 | 1 |
lineage1.1.1.1 | 1 |
lineage1.1.2 | 2 |
lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 54 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR7652975 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4798942 | XDR-TB | lineage3.1.2 | in |
ERR4796817 | Pre-XDR-TB | lineage3 | in |
ERR2515874 | MDR-TB | lineage2.2.1 | za |
ERR6358918 | RR-TB | lineage4.6.1.1 | None |
ERR13290924 | Pre-XDR-TB | lineage4.5 | None |
ERR5865764 | MDR-TB | lineage2.2.1 | None |
SRR5153718 | Pre-XDR-TB | lineage2.2.1 | None |
SRR16370516 | Pre-XDR-TB | lineage2.2.1 | None |
SRR15661602 | MDR-TB | lineage2.2.1.1 | None |
SRR29017233 | MDR-TB | lineage2.2.1 | None |
SRR1049624 | MDR-TB | lineage4.3.4.2.1 | None |
ERR10112835 | MDR-TB | lineage2.2.1 | None |
ERR5864228 | Pre-XDR-TB | lineage2.2.1 | None |
SAMN02381010 | MDR-TB | lineage4.3.4.2.1 | None |
ERR038755 | MDR-TB | lineage4.1.1.3 | ug |
SRR1049625 | MDR-TB | lineage4.3.4.2.1 | None |
ERR12796623 | MDR-TB | lineage3 | None |
SRR25534213 | MDR-TB | lineage2.2.1 | None |
ERR7737625 | MDR-TB | lineage3 | None |
ERR4553966 | MDR-TB | lineage2.2.1 | None |
SAMEA2534496 | MDR-TB | lineage2.2.1 | uz |
ERR038744 | MDR-TB | lineage4.3.4.2.1 | ug |
ERR4831656 | MDR-TB | lineage2.2.1 | vn |
ERR987706 | MDR-TB | lineage4.3.4.2.1 | None |
ERR6362659 | MDR-TB | lineage2.2.1.1 | None |
SRR7535045 | MDR-TB | lineage4.3.4.2.1 | None |
ERR10748536 | MDR-TB | lineage2.2.1 | None |
SRR1140750 | MDR-TB | lineage4.3.4.2.1 | None |
ERR5866494 | MDR-TB | lineage2.2.1 | None |
ERR9119709 | MDR-TB | lineage2.2.1.1 | None |
SRR12142361 | Pre-XDR-TB | lineage2.2.1 | None |
SRR12142318 | Pre-XDR-TB | lineage2.2.1 | None |
SRR12142408 | Pre-XDR-TB | lineage2.2.1 | None |
ERR552226_ERR552225 | MDR-TB | lineage2.2.1 | None |
SRR18054772 | MDR-TB | lineage2.2.1 | None |
SRR11662473 | MDR-TB | lineage1.1.1 | None |
SRR28393322 | MDR-TB | lineage4.1.1 | None |
SRR10305655 | MDR-TB | lineage2.2.1 | None |
SRR29385482 | MDR-TB | lineage2.2.1.1 | None |
ERR552225 | MDR-TB | lineage2.2.1 | None |
SRR11662605 | MDR-TB | lineage1.1.1.1 | None |
SRR29017110 | MDR-TB | lineage1.1.2 | None |
ERR5865098 | MDR-TB | lineage2.2.1 | None |
ERR10112874 | MDR-TB | lineage2.2.1 | None |
ERR5865765 | MDR-TB | lineage2.2.1 | None |
SRR12142333 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1062898 | MDR-TB | lineage4.3.4.2.1 | None |
ERR4553822 | MDR-TB | lineage1.1.2 | None |
ERR552226 | MDR-TB | lineage2.2.1 | None |
DRR130197 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6339642 | MDR-TB | lineage3 | au |
ERR4796304 | MDR-TB | lineage3.1 | None |
SRR25207004 | MDR-TB | lineage2.2.1 | None |