lineage | Count |
---|---|
lineage3 | 4 |
lineage2.2.1 | 27 |
lineage3.1 | 1 |
lineage2.2.1.1 | 4 |
lineage4.3.4.2.1 | 8 |
lineage1.1.2 | 2 |
lineage1.1.1 | 1 |
lineage3.1.2 | 1 |
lineage4.6.1.1 | 1 |
lineage4.1.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4.5 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 53 |
ID | Drug resistance | Lineage | Country iso2 | ERR12796623 | MDR-TB | lineage3 | None | SRR25534213 | MDR-TB | lineage2.2.1 | None | ERR4796304 | MDR-TB | lineage3.1 | None | ERR6362659 | MDR-TB | lineage2.2.1.1 | None | SRR7652975 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748536 | MDR-TB | lineage2.2.1 | None | SRR1140750 | MDR-TB | lineage4.3.4.2.1 | None | ERR5866494 | MDR-TB | lineage2.2.1 | None | SRR29017110 | MDR-TB | lineage1.1.2 | None | ERR5865764 | MDR-TB | lineage2.2.1 | None | SRR11662473 | MDR-TB | lineage1.1.1 | None | SRR15661602 | MDR-TB | lineage2.2.1.1 | None | SRR29385482 | MDR-TB | lineage2.2.1.1 | None | ERR10112835 | MDR-TB | lineage2.2.1 | None | ERR10112874 | MDR-TB | lineage2.2.1 | None | ERR4553822 | MDR-TB | lineage1.1.2 | None | ERR2515874 | MDR-TB | lineage2.2.1 | za | DRR130197 | Pre-XDR-TB | lineage2.2.1 | None | ERR038744 | MDR-TB | lineage4.3.4.2.1 | ug | ERR4831656 | MDR-TB | lineage2.2.1 | vn | ERR4553966 | MDR-TB | lineage2.2.1 | None | ERR987706 | MDR-TB | lineage4.3.4.2.1 | None | SRR25207004 | MDR-TB | lineage2.2.1 | None | SRR12142361 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142408 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153718 | Pre-XDR-TB | lineage2.2.1 | None | SRR18054772 | MDR-TB | lineage2.2.1 | None | SRR16370516 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305655 | MDR-TB | lineage2.2.1 | None | ERR552225 | MDR-TB | lineage2.2.1 | None | ERR5865098 | MDR-TB | lineage2.2.1 | None | SAMEA2534496 | MDR-TB | lineage2.2.1 | uz | ERR5865765 | MDR-TB | lineage2.2.1 | None | SRR12142333 | Pre-XDR-TB | lineage2.2.1 | None | ERR552226 | MDR-TB | lineage2.2.1 | None | ERR7737625 | MDR-TB | lineage3 | None | SRR7535045 | MDR-TB | lineage4.3.4.2.1 | None | ERR4798942 | XDR-TB | lineage3.1.2 | in | ERR4796817 | Pre-XDR-TB | lineage3 | in | ERR9119709 | MDR-TB | lineage2.2.1.1 | None | ERR6358918 | RR-TB | lineage4.6.1.1 | None | ERR552226_ERR552225 | MDR-TB | lineage2.2.1 | None | SRR28393322 | MDR-TB | lineage4.1.1 | None | SRR1049624 | MDR-TB | lineage4.3.4.2.1 | None | SRR12142318 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662605 | MDR-TB | lineage1.1.1.1 | None | ERR13290924 | Pre-XDR-TB | lineage4.5 | None | ERR5864228 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062898 | MDR-TB | lineage4.3.4.2.1 | None | SAMN02381010 | MDR-TB | lineage4.3.4.2.1 | None | ERR038755 | MDR-TB | lineage4.1.1.3 | ug | SRR6339642 | MDR-TB | lineage3 | au | SRR1049625 | MDR-TB | lineage4.3.4.2.1 | None |
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