lineage | Count |
---|---|
La1.8.1 | 6 |
La1.7.1 | 5 |
lineage4.8.2 | 2 |
lineage3.1.1 | 2 |
lineage3 | 5 |
lineage4.3.3 | 2 |
lineage4.4.2 | 1 |
lineage2.2.1 | 3 |
lineage1.1.2 | 3 |
lineage4.8.1 | 1 |
lineage4.1.2 | 1 |
lineage4.9 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 | 1 |
lineage4.2.2;lineage4.1.2;lineage2.2.2;lineage1.2.1.2.1 | 1 |
lineage6;lineage5.1;lineage4.2.2;lineage1.1.3.1;lineage1.1.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.3.4.2.1;lineage1.1.3 | 1 |
lineage4.1.1 | 3 |
lineage4.8 | 2 |
lineage3.1.2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 48 |
ID | Drug resistance | Lineage | Country iso2 | SRR1791828 | Other | La1.8.1 | None | SRR1792073 | Other | La1.7.1 | None | SRR1791940 | Other | La1.8.1 | None | SRR1791907 | Other | La1.8.1 | None | SRR1791947 | Other | La1.8.1 | None | SRR1792486 | Other | La1.7.1 | None | SRR1792506 | Other | La1.8.1 | None | SRR1792499 | Other | La1.7.1 | None | SRR1792495 | Other | La1.7.1 | None | SRR18213841 | Sensitive | lineage4.8.2 | None | SRR18213753 | Sensitive | lineage3.1.1 | None | SRR18213836 | Sensitive | lineage3 | None | SRR18213914 | Sensitive | lineage4.8.2 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR2467264 | Sensitive | lineage4.4.2 | None | SRR6650404 | Sensitive | lineage2.2.1 | None | SRR3675252 | RR-TB | lineage1.1.2 | None | SRR4019491 | Other | La1.7.1 | None | SRR4033387 | RR-TB | lineage2.2.1 | None | SRR4033234 | HR-TB | lineage4.8.1 | None | ERR245816 | Sensitive | lineage4.1.2 | None | SRR8073606 | Other | La1.8.1 | None | SRR314729 | Sensitive | lineage4.9 | None | ERR245815 | Sensitive | lineage4.3.4.2.1 | None | ERR036185 | MDR-TB | lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 | None | ERR025437 | HR-TB | lineage4.2.2;lineage4.1.2;lineage2.2.2;lineage1.2.1.2.1 | None | ERR028317 | Sensitive | lineage6;lineage5.1;lineage4.2.2;lineage1.1.3.1;lineage1.1.1 | None | ERR036237 | Sensitive | lineage4.3.4.2.1 | None | ERR036198 | Other | lineage4.3.4.2 | None | ERR036224 | HR-TB | lineage4.3.4.2.1;lineage1.1.3 | None | ERR046742 | Sensitive | lineage4.1.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR040092 | Sensitive | lineage3.1.1 | None | ERR046899 | Sensitive | lineage4.8 | None | ERR046810 | Sensitive | lineage3.1.2 | None | ERR046826 | Sensitive | lineage3 | None | ERR046806 | Sensitive | lineage3 | None | ERR046896 | Sensitive | lineage1.1.2 | None | ERR046931 | Sensitive | lineage4.1.1 | None | ERR046955 | Sensitive | lineage4.1.2.1 | None | ERR046944 | Pre-XDR-TB | lineage4.8 | None | ERR1367680 | Sensitive | lineage4.4.1.1 | None | ERR046978 | Sensitive | lineage1.1.2 | None | ERR046985 | MDR-TB | lineage4.1.1.3.1 | None | ERR046976 | Sensitive | lineage4.1.1 | None | ERR046979 | Sensitive | lineage3 | None | ERR046987 | Sensitive | lineage3 | None | ERR1161620 | MDR-TB | lineage2.2.1 | None |
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