Rv3457c - p.Gly31Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
2 HR-TB
73 MDR-TB
43 Pre-XDR-TB
3 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 111 |
| lineage2.2.1;lineage4 | 2 |
| lineage2.2.1;lineage4.2.1 | 3 |
| lineage4.3.3 | 1 |
| lineage2.2.1;lineage3 | 2 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 121 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29539205 | MDR-TB | lineage2.2.1 | None | SRR29539004 | MDR-TB | lineage2.2.1 | None | SRR24827314 | MDR-TB | lineage2.2.1 | None | ERR5865557 | MDR-TB | lineage2.2.1 | None | SRR29356834 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801330 | MDR-TB | lineage2.2.1;lineage4 | None | SRR29539439 | MDR-TB | lineage2.2.1 | None | ERR5865170 | MDR-TB | lineage2.2.1 | None | ERR11068412 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681219 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866180 | MDR-TB | lineage2.2.1 | None | SRR8374277 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356952 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774585 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068626 | MDR-TB | lineage2.2.1 | None | ERR13285763 | MDR-TB | lineage2.2.1 | None | SRR5153612 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516391 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714924 | MDR-TB | lineage2.2.1 | None | ERR13276006 | MDR-TB | lineage2.2.1 | None | SRR29539812 | XDR-TB | lineage2.2.1 | None | ERR2307520 | MDR-TB | lineage2.2.1 | None | ERR5865301 | Pre-XDR-TB | lineage2.2.1 | None | ERR11067750 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287493 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4828829 | MDR-TB | lineage2.2.1 | None | SRR8439237 | MDR-TB | lineage2.2.1 | None | ERR11067955 | MDR-TB | lineage2.2.1 | None | SRR5152953 | MDR-TB | lineage2.2.1 | None | ERR137271 | MDR-TB | lineage2.2.1;lineage4.2.1 | ru | ERR117454 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2516804 | MDR-TB | lineage2.2.1 | gb | ERR2041744 | MDR-TB | lineage2.2.1 | rs | ERR2041742 | MDR-TB | lineage2.2.1 | rs | SRR6831785 | MDR-TB | lineage2.2.1 | None | ERR13285771 | MDR-TB | lineage2.2.1 | None | SRR29539856 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539424 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510862 | MDR-TB | lineage2.2.1 | it | SRR14801880 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865725 | MDR-TB | lineage2.2.1 | None | SRR24799275 | MDR-TB | lineage2.2.1 | None | ERR551605 | MDR-TB | lineage2.2.1 | None | SRR29081647 | MDR-TB | lineage4.3.3 | None | SRR10380111 | MDR-TB | lineage2.2.1 | None | ERR10762455 | MDR-TB | lineage2.2.1 | None | SRR29681490 | MDR-TB | lineage2.2.1 | None | SRR24256052 | MDR-TB | lineage2.2.1 | None | ERR108421 | MDR-TB | lineage2.2.1 | ru | SRR28239686 | MDR-TB | lineage2.2.1 | None | ERR5865902 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828972 | MDR-TB | lineage2.2.1 | None | SRR25827856 | MDR-TB | lineage2.2.1;lineage3 | None | SRR29539440 | MDR-TB | lineage2.2.1 | None | ERR13284301 | MDR-TB | lineage2.2.1 | None | ERR13276037 | MDR-TB | lineage2.2.1 | None | SRR29681437 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276872 | MDR-TB | lineage2.2.1 | None | SRR6832777 | MDR-TB | lineage2.2.1 | None | SRR28351189 | MDR-TB | lineage2.2.1 | None | SRR28393789 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911744 | Pre-XDR-TB | lineage2.2.1 | us | ERR4813173 | Pre-XDR-TB | lineage2.2.1 | pe | SRR6832856 | MDR-TB | lineage2.2.1 | None | ERR5866504 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307368 | MDR-TB | lineage2.2.1 | None | SRR6257046 | Pre-XDR-TB | lineage2.2.1 | None | SRR8363334 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865901 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866181 | MDR-TB | lineage2.2.1 | None | SRR28351613 | MDR-TB | lineage2.2.1;lineage4 | None | ERR13284488 | MDR-TB | lineage2.2.1 | None | ERR5865726 | MDR-TB | lineage2.2.1 | None | ERR5865900 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865904 | MDR-TB | lineage2.2.1 | None | SRR24222957 | Pre-XDR-TB | lineage2.2.1 | None | SRR21727886 | MDR-TB | lineage2.2.1 | None | SRR5153214 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798546 | MDR-TB | lineage2.2.1 | None | ERR5865967 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539056 | MDR-TB | lineage2.2.1 | None | SRR29539510 | MDR-TB | lineage2.2.1 | None | ERR13260655 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782630 | HR-TB | lineage2.2.1 | None | SRR29539014 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284263 | MDR-TB | lineage2.2.1 | None | SRR29356705 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153310 | MDR-TB | lineage2.2.1 | None | ERR10762468 | MDR-TB | lineage2.2.1 | None | SRR14801500 | MDR-TB | lineage2.2.1 | None | ERR11068071 | MDR-TB | lineage2.2.1 | None | SRR16088583 | Pre-XDR-TB | lineage2.2.1 | None | SRR6914122 | MDR-TB | lineage2.2.1 | None | ERR108477 | MDR-TB | lineage2.2.1 | ru | ERR10762311 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR25827504 | MDR-TB | lineage2.2.1;lineage3 | None | SRR6832551 | MDR-TB | lineage2.2.1 | None | SRR29539568 | HR-TB | lineage2.2.1 | None | SRR6257098 | Pre-XDR-TB | lineage2.2.1 | None | SRR7781512 | MDR-TB | lineage2.2.1 | None | ERR13285851 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR29539330 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380103 | MDR-TB | lineage2.2.1 | None | SRR23310906 | XDR-TB | lineage2.2.1 | None | SRR10397225 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762469 | MDR-TB | lineage2.2.1 | None | ERR5865851 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498658 | MDR-TB | lineage2.2.1 | None | SRR28706454 | MDR-TB | lineage2.2.1 | None | SRR25827489 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.2.1 | None | SRR28239747 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828917 | MDR-TB | lineage2.2.1 | None | ERR4829372 | Pre-XDR-TB | lineage2.2.1 | it | ERR7911421 | Pre-XDR-TB | lineage2.2.1 | us | ERR4829010 | MDR-TB | lineage2.2.1 | it | ERR5865558 | MDR-TB | lineage2.2.1 | None | SRR25827452 | MDR-TB | lineage1.1.2;lineage2.2.1;lineage4.2.2.2 | None | ERR4024807 | MDR-TB | lineage2.2.1 | None | SRR18714848 | MDR-TB | lineage2.2.1 | None | ERR5865852 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356990 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
