Rv3596c - c.2418C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
15018 Sensitive
482 RR-TB
1823 HR-TB
6326 MDR-TB
1964 Pre-XDR-TB
158 XDR-TB
931 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 2726 |
| lineage4.3.3 | 11333 |
| lineage4.3.4.2 | 3410 |
| lineage4.3.2 | 2553 |
| lineage4.3.1 | 336 |
| lineage4.3.2.1 | 2707 |
| lineage4.3.4.1 | 2326 |
| lineage4.3.3;lineage4.4.1.1 | 8 |
| lineage4.3.3;lineage4.8 | 24 |
| lineage4.3 | 455 |
| lineage2.2.1;lineage4.3.2.1 | 27 |
| lineage3.1.2.2 | 1 |
| lineage3;lineage4.3.4.1 | 2 |
| lineage4 | 23 |
| lineage4.1.2.1;lineage4.3.3 | 51 |
| lineage2.2.1;lineage4.3.3 | 117 |
| lineage4.1.1.1;lineage4.3.4.2 | 4 |
| lineage2.2.1;lineage4.3.2 | 13 |
| lineage4.3.4.2;lineage4.7 | 2 |
| lineage2.2.1;lineage4.3.4.2 | 9 |
| lineage2.2.1;lineage4.3.4.1 | 9 |
| lineage4.3.4 | 31 |
| lineage4.1.1;lineage4.3.3 | 7 |
| lineage2.2;lineage4.3.2 | 1 |
| lineage4.3.1.1 | 99 |
| lineage2.2.1.1;lineage4.3.2.1 | 13 |
| lineage4.1.2.1;lineage4.3.4.2 | 16 |
| lineage3.1.1;lineage4.3.4.2 | 2 |
| lineage4.1.2;lineage4.3.3 | 5 |
| lineage3.1.2;lineage4.3.3 | 3 |
| lineage4.3.4.2;lineage4.4.1.1 | 2 |
| lineage4.3.4.2.1;lineage4.6.1.1 | 1 |
| lineage4.3.3;lineage4.3.4.1 | 7 |
| lineage4.1.2.1;lineage4.3.4.2.1 | 4 |
| lineage2.2.1;lineage4 | 3 |
| lineage3.1.1;lineage4.3.4.2.1 | 7 |
| lineage2.2.1;lineage4.3.3;lineage4.4.1.1 | 1 |
| lineage4.3.3;lineage4.3.4.2 | 11 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage4.3.2;lineage4.3.3 | 17 |
| lineage2.2.1;lineage4.3.3;lineage4.8 | 4 |
| lineage4.3.4.2;lineage4.6.2.2 | 1 |
| lineage4.3.4.2.1;lineage4.9 | 4 |
| lineage4.1.2;lineage4.3.4.1;lineage4.8 | 1 |
| lineage1.1.2;lineage4.3.4.2.1 | 2 |
| lineage4.1.1;lineage4.3.4.2 | 1 |
| lineage3;lineage4.3.3 | 9 |
| lineage4.3.3;lineage4.3.4.2;lineage4.6.1.1 | 2 |
| lineage3.1;lineage4.3.4.2.1 | 2 |
| lineage4.3.2.1;lineage4.9 | 4 |
| lineage4.3.4.2;lineage4.8 | 5 |
| lineage4.3.4.1;lineage4.7 | 2 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage2.2.1.1;lineage4.3.3 | 6 |
| lineage4.3.4.2;lineage4.6.1.1 | 2 |
| lineage4.1.4;lineage4.3.3 | 5 |
| lineage2.2.1;lineage4.3 | 4 |
| lineage4.2.1;lineage4.3.3 | 8 |
| lineage1.2.2.1;lineage4.3.4.2.1 | 3 |
| lineage4.1.1.3;lineage4.3.2 | 1 |
| lineage4.1.1.2;lineage4.3.4.2.1 | 1 |
| lineage4.1.2;lineage4.3.4.2.1 | 2 |
| lineage4.1.2;lineage4.3.4.2 | 1 |
| lineage4.3.3;lineage4.5 | 3 |
| lineage4.1.2.1;lineage4.3.3;lineage4.6.2.2 | 1 |
| lineage4.1.2.1;lineage4.3 | 5 |
| lineage1.2.2.2;lineage4.1;lineage4.3.3 | 1 |
| lineage4.1.2.1;lineage4.3.2 | 21 |
| lineage1.1.3;lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1;lineage4.3.3 | 5 |
| lineage4.8 | 1 |
| lineage4.3.4.1;lineage4.8 | 2 |
| lineage4.3.2.1;lineage4.4.1.1.1 | 1 |
| lineage4.3.3;lineage4.9 | 10 |
| lineage3.1.2.1;lineage4.3.4.2 | 3 |
| lineage1.1.3.2;lineage4.3.4.2.1 | 3 |
| lineage2;lineage4.3.4.2.1 | 1 |
| lineage1.1.3.1;lineage4.3.4.2 | 1 |
| lineage2.2.1;lineage4.3.4.2.1 | 5 |
| lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 | 1 |
| lineage1.2.2.2;lineage4.3.2.1 | 3 |
| lineage4.3.3;lineage4.3.4 | 1 |
| lineage2.2.1;lineage3.1.1;lineage4.2.2.2;lineage4.3.3 | 1 |
| lineage4.1.2.1;lineage4.3.2.1 | 2 |
| lineage4.3.2.1;lineage4.3.4.2.1 | 3 |
| lineage2.2.2;lineage4.3.3 | 2 |
| lineage4.1;lineage4.3.3 | 1 |
| lineage1.1.2;lineage4.3.2.1 | 2 |
| lineage2.2.1;lineage4.2.1;lineage4.3.3 | 1 |
| lineage2.2.1.1;lineage4.3.2.1;lineage4.3.3;lineage4.4.1.1 | 1 |
| lineage4.3.2.1;lineage4.8.1 | 2 |
| lineage3.1.2;lineage4.3.4.1 | 1 |
| lineage4.3.4.1;lineage4.3.4.2.1 | 4 |
| lineage4.1.1.1;lineage4.1.2;lineage4.3.3 | 2 |
| lineage4.1.2;lineage4.3.2 | 4 |
| lineage4.1.2.1;lineage4.3.1 | 1 |
| lineage4.3.3;lineage4.3.4.2;lineage4.9.1 | 1 |
| lineage4.3.4.1;lineage4.4.1.1 | 3 |
| lineage3;lineage4.3.4.2.1 | 3 |
| lineage3.1;lineage4.3.3 | 1 |
| lineage1.1.3.2;lineage4.3.4.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.3;lineage4.8.1 | 2 |
| lineage3.1.2;lineage4.3.4.2.1 | 4 |
| lineage4.3.2;lineage4.4.1 | 1 |
| lineage4.3.4.2.1;lineage4.4.1.1.1 | 4 |
| lineage4.3.2;lineage4.3.4.2.1 | 1 |
| lineage3.1.1;lineage4.3.3 | 5 |
| lineage4.2.1.1;lineage4.3.3 | 4 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.3.2.1 | 3 |
| lineage2.2.1.1;lineage4.3.4.1 | 1 |
| lineage4.1.2.1;lineage4.3.4.1 | 10 |
| lineage4.1.1.3;lineage4.3.3 | 1 |
| lineage3.1.2;lineage4.3.2.1 | 2 |
| lineage4.3.2.1;lineage4.4.1.1 | 2 |
| lineage1.2.1.2.1;lineage4.3.3 | 1 |
| lineage4.3.2;lineage4.3.4.2 | 2 |
| La1.3;lineage4.3.3 | 1 |
| lineage2.2.2;lineage4.3.2.1 | 3 |
| lineage4.1.1.3;lineage4.3.4.2 | 3 |
| lineage1.1.3;lineage4.3.3 | 1 |
| lineage4.3.4.1;lineage4.6.2.2;lineage6.1.2 | 1 |
| lineage4.1;lineage4.3.2.1 | 1 |
| lineage4.9 | 2 |
| lineage1.1.2;lineage4.3.3 | 2 |
| lineage4.3.4.2;lineage4.4.1.1.1 | 1 |
| lineage4.1;lineage4.3.4.1 | 1 |
| lineage4.1.2.1;lineage4.3.4 | 1 |
| lineage2.2.1;lineage4.1.1.3;lineage4.3.3 | 1 |
| lineage1.1;lineage2.2;lineage3.1.1;lineage4.2.2.2;lineage4.3.3 | 1 |
| lineage4.3.4.1;lineage6.1.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1;lineage3;lineage4.3.2 | 1 |
| lineage4.3.4.2.1;lineage4.4.1.1 | 4 |
| lineage4.3.4.2.1;lineage4.6.1.2 | 2 |
| lineage2.2;lineage4.3.3 | 1 |
| lineage4.3.2;lineage4.4.1.2 | 1 |
| lineage1.2.2.2;lineage4.3.4.2.1 | 3 |
| lineage2.2.1;lineage4.3.1 | 1 |
| lineage4.3.3;lineage4.7 | 1 |
| lineage4.1.1.1;lineage4.3.4.1 | 1 |
| 3 | |
| lineage4.3.3;lineage4.3.4.2.1 | 2 |
| lineage2.2;lineage4.3.4.2.1 | 1 |
| lineage4.1.1;lineage4.3.2 | 2 |
| lineage4.3.4.2;lineage6.1.3 | 1 |
| lineage1.1;lineage4.3.4.2.1 | 1 |
| lineage4.1.1.3;lineage4.3.4.2.1 | 3 |
| lineage4.1.2;lineage4.3.4 | 2 |
| lineage2.2.1;lineage3;lineage4.3.4.1;lineage4.3.4.2.1;lineage4.9 | 1 |
| lineage4.3.2.1;lineage4.8 | 1 |
| lineage3;lineage4.3.4.2 | 4 |
| lineage1.2.2.2;lineage4.3.3 | 3 |
| lineage3.1.1;lineage4.3.2.1 | 2 |
| lineage4.3.1;lineage4.9 | 1 |
| lineage4.2.2;lineage4.3.3 | 1 |
| lineage3.1 | 1 |
| lineage4.3.4.1;lineage4.3.4.2 | 2 |
| lineage1.2.1.2.1;lineage4.3.4.1 | 1 |
| lineage4.3.4.1;lineage4.4 | 1 |
| lineage4.3.3;lineage6.2.2 | 1 |
| lineage4.3.4;lineage4.8 | 1 |
| lineage4.3;lineage4.9.1 | 1 |
| lineage4.3.3;lineage4.6.4 | 1 |
| lineage4.1.1.3.1;lineage4.3.2 | 2 |
| lineage2.2.1;lineage4.1.2.1;lineage4.3.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage3.1.2;lineage4.2.2.2;lineage4.3.3 | 1 |
| lineage4.3.3;lineage4.4.1.2 | 2 |
| lineage1.2.1.2.1;lineage4.3 | 1 |
| lineage4.3.3;lineage4.6.1.2 | 3 |
| lineage4.1;lineage4.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.2.1;lineage4.3.4.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.3.2.1;lineage4.3.4.2;lineage4.4.1.1 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage4.1.2.1;lineage4.3.3;lineage4.9 | 1 |
| lineage2.2.1;lineage4.1.2;lineage4.3.3 | 1 |
| lineage2.2.1.1;lineage4.3.4.2.1 | 2 |
| lineage1.1.3.2;lineage4.3.4.1 | 1 |
| lineage1.1.2;lineage4.3.4.2.1;lineage4.4 | 1 |
| lineage2.2.1 | 1 |
| lineage4.2.1;lineage4.3 | 1 |
| lineage2.2.1.2;lineage4.3.4.2 | 1 |
| lineage1.1.3.2;lineage4.3.4.2.1;lineage4.9 | 1 |
| lineage4.3.4.1;lineage4.4.1.1.1 | 1 |
| lineage2;lineage4.3.3 | 1 |
| lineage1.2.1.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.1;lineage4.3.3 | 1 |
| lineage3;lineage4.3.2.1 | 1 |
| lineage1.1.3.1;lineage4.3.3 | 1 |
| lineage1.1;lineage4.3.4.2 | 1 |
| La1.8;lineage4.3.2 | 1 |
| lineage4.1;lineage4.3.4.2.1 | 1 |
| lineage2.2.1;lineage4.1.1.3;lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 26702 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
This table has 26702 rows and could cause your browser to crash if rendered.
