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SRA data
Rv3596c
- c.309C>T
Drug resistance types
1 Sensitive
0 RR-TB
1 HR-TB
2 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
5
lineage4.8
2
lineage3.1;lineage4.8
1
lineage1.2.1.2.1
1
Showing 1 to 4 of 4 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
9
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR13267035
Pre-XDR-TB
lineage4.8
None
ERR144579
MDR-TB
lineage2.2.1
ru
ERR4796669
HR-TB
lineage3.1;lineage4.8
in
ERR4800319
MDR-TB
lineage4.8
in
ERR4828014
Pre-XDR-TB
lineage2.2.1
None
ERR5866558
Pre-XDR-TB
lineage2.2.1
None
ERR5866559
Pre-XDR-TB
lineage2.2.1
None
SRR13232490
Pre-XDR-TB
lineage2.2.1
None
SRR27450267
Sensitive
lineage1.2.1.2.1
None
Showing 1 to 9 of 9 entries
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