lineage | Count |
---|---|
La1.8.1 | 2 |
La2 | 1 |
lineage3.1.1 | 5 |
lineage4.1.1.3 | 3 |
lineage4.4.1.1 | 2 |
lineage3 | 9 |
lineage4.3.3 | 2 |
lineage4.8 | 10 |
lineage4 | 2 |
lineage1.2.2.1 | 1 |
La1.2.BCG | 1 |
lineage4.6.2.2 | 2 |
lineage4.1.2.1 | 4 |
lineage2.2.1 | 10 |
2 | |
lineage4.3.1.1 | 1 |
lineage4.2.2.2 | 2 |
lineage4.9 | 1 |
lineage4.1.2.1.1 | 2 |
lineage1.1.3.3 | 1 |
lineage4.6.1.2 | 1 |
lineage4.1.1 | 1 |
La1.7.1 | 1 |
lineage1.2.1.2.1 | 3 |
lineage2.2 | 1 |
lineage4.3.2.1 | 2 |
spoligotype | Count |
---|---|
None | 72 |
ID | Drug resistance | Lineage | Country iso2 | SRR1791721 | Other | La1.8.1 | None | SRR17156538 | Sensitive | La2 | None | SRR19428567 | Sensitive | lineage3.1.1 | None | SRR18913745 | Sensitive | lineage4.1.1.3 | None | SRR6207290 | Sensitive | lineage4.4.1.1 | None | ERR4815676 | Other | lineage3 | gb | SRR6207283 | Sensitive | lineage4.3.3 | None | ERR4815367 | Other | lineage3.1.1 | None | ERR2229140 | Other | lineage4.8 | None | ERR1950058 | HR-TB | lineage4.8 | dk | ERR2229579 | Sensitive | lineage4 | None | ERR552562 | Other | lineage1.2.2.1 | None | ERR4815781 | Other | La1.2.BCG | gb | ERR1750929 | Sensitive | lineage4.1.1.3 | za | ERR2229759 | Sensitive | lineage4.8 | None | ERR2229407 | Sensitive | lineage4 | None | ERR2229805 | Sensitive | lineage4.8 | dk | ERR2229277 | Sensitive | lineage4.8 | None | ERR2510480 | MDR-TB | lineage3 | pk | ERR2229532 | Other | lineage4.8 | None | ERR2245346 | HR-TB | lineage3.1.1 | no | ERR2510737 | Other | lineage4.4.1.1 | it | ERR2512737 | Sensitive | lineage3 | gb | ERR2245356 | Other | lineage3.1.1 | no | ERR2510821 | Sensitive | lineage4.6.2.2 | it | ERR4818265 | Other | lineage4.1.2.1 | None | ERR2515300 | Sensitive | lineage2.2.1 | za | SRR6045466 | Sensitive | None | ERR4819713 | Sensitive | lineage3 | None | ERR2515013 | Sensitive | lineage2.2.1 | None | ERR4820122 | Other | lineage4.3.1.1 | None | ERR4820147 | Sensitive | lineage4.2.2.2 | gb | ERR4820174 | Other | None | ERR2513897 | Sensitive | lineage2.2.1 | gb | ERR2516071 | Other | lineage4.8 | None | ERR4827463 | RR-TB | lineage4.1.2.1 | None | ERR4827429 | MDR-TB | lineage4.8 | None | ERR4827439 | MDR-TB | lineage2.2.1 | None | SRR6046115 | Sensitive | lineage3 | None | ERR4821729 | Sensitive | lineage4.1.2.1 | None | SRR6045855 | Sensitive | lineage3 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6484900 | Sensitive | lineage4.8 | None | SRR6045362 | Sensitive | lineage4.9 | None | SRR6484903 | Sensitive | lineage2.2.1 | None | ERR4972522 | MDR-TB | lineage4.1.2.1.1 | None | ERR4831427 | MDR-TB | lineage3 | None | ERR3077931 | MDR-TB | lineage4.2.2.2 | None | SRR6831808 | Sensitive | lineage2.2.1 | None | SRR6855730 | Sensitive | lineage2.2.1 | None | ERR4972579 | MDR-TB | lineage4.1.2.1.1 | None | SRR6896605 | Other | lineage4.8 | None | ERR10877874 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131222 | Sensitive | lineage4.6.2.2 | None | SRR9028481 | MDR-TB | lineage3 | None | SRR7517784 | Other | lineage1.1.3.3 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | ERR1194810 | Other | lineage2.2.1 | None | ERR1194800 | Other | lineage2.2.1 | None | ERR3324355 | HR-TB | lineage4.1.1.3 | None | ERR1274707 | HR-TB | lineage4.1.1 | None | ERR4627378 | Other | La1.8.1 | None | ERR4450946 | Other | La1.7.1 | None | ERR6336755 | HR-TB | lineage1.2.1.2.1 | None | ERR5866121 | MDR-TB | lineage4.3.3 | None | ERR5908243 | Sensitive | lineage1.2.1.2.1 | None | ERR5866538 | MDR-TB | lineage2.2 | None | ERR9786845 | Sensitive | lineage4.1.2.1 | None | ERR7821162 | Sensitive | lineage4.3.2.1 | None | ERR7821167 | Sensitive | lineage4.3.2.1 | None | ERR9117814 | Sensitive | lineage3 | None | ERR6336772 | Sensitive | lineage1.2.1.2.1 | None |
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