Rv3696c - c.-104C>T

Drug resistance types
31 Sensitive 4 RR-TB 0 HR-TB 30 MDR-TB 21 Pre-XDR-TB 2 XDR-TB 2 Other
lineage Counts
lineage Count
lineage2.2.1 55
lineage4.6.1.1 33
lineage2.2.1.1 1
lineage4.3.3 1
spoligotype Counts
spoligotype Count
None 90
Geographic prevalence
Country level data for this variant is available for 24 isolates.
Statisctical support
Not enough data to calculate support.
ID Drug resistance Lineage Country iso2
SRR1723633 MDR-TB lineage2.2.1 cn
ERR6358949 Sensitive lineage4.6.1.1 None
ERR6358884 Sensitive lineage4.6.1.1 None
ERR6359114 Sensitive lineage4.6.1.1 None
SRR25207362 Pre-XDR-TB lineage2.2.1 None
ERR6358899 Sensitive lineage4.6.1.1 None
ERR6358941 Sensitive lineage4.6.1.1 None
SRR2024882 MDR-TB lineage2.2.1 cn
SRR25207191 MDR-TB lineage2.2.1 None
ERR6358869 MDR-TB lineage4.6.1.1 None
SRR10305975 MDR-TB lineage2.2.1 None
ERR4811209 Sensitive lineage2.2.1 cn
SRR21277744 Sensitive lineage2.2.1 None
SRR25207377 MDR-TB lineage2.2.1 None
SRR2024887 MDR-TB lineage2.2.1 cn
ERR11068097 Sensitive lineage4.6.1.1 None
ERR6358901 Sensitive lineage4.6.1.1 None
SRR25207194 Pre-XDR-TB lineage2.2.1 None
SRR25207189 MDR-TB lineage2.2.1 None
SRR25206968 Pre-XDR-TB lineage2.2.1 None
ERR4810553 Sensitive lineage2.2.1 cn
ERR4811294 XDR-TB lineage2.2.1 cn
SRR1723631 Other lineage2.2.1 None
SRR10305973 MDR-TB lineage2.2.1 None
SRR25207332 MDR-TB lineage2.2.1 None
SRR25206972 Pre-XDR-TB lineage2.2.1 None
ERR6359065 Sensitive lineage4.6.1.1 None
SRR25207100 MDR-TB lineage2.2.1 None
ERR6358880 RR-TB lineage4.6.1.1 None
ERR6358885 Sensitive lineage4.6.1.1 None
SRR25207225 Pre-XDR-TB lineage2.2.1 None
ERR038738 RR-TB lineage4.6.1.1 ug
SRR10305977 Pre-XDR-TB lineage2.2.1 None
ERR4814640 Sensitive lineage4.6.1.1 gb
ERR4810943 Pre-XDR-TB lineage2.2.1 cn
SRR15368876 Sensitive lineage2.2.1.1 None
SRR25207050 MDR-TB lineage2.2.1 None
SRR25207355 Pre-XDR-TB lineage2.2.1 None
ERR6358848 MDR-TB lineage4.6.1.1 None
SRR25207376 Pre-XDR-TB lineage2.2.1 None
SRR25207083 Pre-XDR-TB lineage2.2.1 None
ERR6358722 MDR-TB lineage4.6.1.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR6358948 Sensitive lineage4.6.1.1 None
ERR6359038 Sensitive lineage4.6.1.1 None
ERR4810467 Pre-XDR-TB lineage2.2.1 cn
SRR25207184 Pre-XDR-TB lineage2.2.1 None
SRR20969395 MDR-TB lineage2.2.1 None
ERR6359116 Sensitive lineage4.6.1.1 None
ERR6359015 Sensitive lineage4.6.1.1 None
SRR10040464 MDR-TB lineage2.2.1 None
SRR10040252 MDR-TB lineage2.2.1 None
SRR6824361 MDR-TB lineage2.2.1 cn
SRR1723632 MDR-TB lineage2.2.1 cn
ERR4811354 MDR-TB lineage2.2.1 cn
ERR4810993 Pre-XDR-TB lineage2.2.1 cn
SRR25207186 MDR-TB lineage2.2.1 None
ERR6358894 Sensitive lineage4.6.1.1 None
ERR502949 MDR-TB lineage2.2.1 None
ERR6358841 Sensitive lineage4.6.1.1 None
ERR4811326 Pre-XDR-TB lineage2.2.1 cn
SRR15316023 MDR-TB lineage2.2.1 None
ERR1199058 Sensitive lineage4.6.1.1 None
SRR6824601 Pre-XDR-TB lineage2.2.1 cn
ERR6359039 Sensitive lineage4.6.1.1 None
ERR6359062 Sensitive lineage4.6.1.1 None
SRR25207371 Pre-XDR-TB lineage2.2.1 None
ERR4810942 MDR-TB lineage2.2.1 cn
SRR2024965 Pre-XDR-TB lineage2.2.1 cn
ERR6359076 Sensitive lineage4.6.1.1 None
ERR6359104 Sensitive lineage4.6.1.1 None
ERR6358879 RR-TB lineage4.6.1.1 None
ERR6358868 MDR-TB lineage4.6.1.1 None
SRR20969901 MDR-TB lineage2.2.1 None
ERR4810949 Pre-XDR-TB lineage2.2.1 cn
ERR6358887 Sensitive lineage4.6.1.1 None
ERR6359055 Sensitive lineage4.6.1.1 None
ERR4810468 MDR-TB lineage2.2.1 cn
SRR12142342 Pre-XDR-TB lineage2.2.1 None
ERR4810970 Pre-XDR-TB lineage2.2.1 cn
ERR2512607 Sensitive lineage2.2.1 gb
SRR25207197 MDR-TB lineage2.2.1 None
SRR6824362 MDR-TB lineage2.2.1 cn
ERR6358918 RR-TB lineage4.6.1.1 None
SRR25206953 XDR-TB lineage2.2.1 None
ERR502947 Pre-XDR-TB lineage2.2.1 None
ERR2516247 Sensitive lineage4.3.3 be
SRR21277325 Sensitive lineage2.2.1 None
ERR502944 MDR-TB lineage2.2.1 None
ERR6359009 Sensitive lineage4.6.1.1 None