Rv3696c - c.569_572dupGGGG
Drug resistance types
15 Sensitive
0 RR-TB
3 HR-TB
5 MDR-TB
9 Pre-XDR-TB
2 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2.BCG | 18 |
| lineage2.2.1 | 13 |
| lineage4.8 | 5 |
| lineage4.4.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage3 | 1 |
| lineage6.1.2 | 2 |
| La1.7.1 | 3 |
| lineage2.2.1.1 | 2 |
| lineage2.1 | 1 |
| lineage2.2.1.1;lineage3 | 1 |
| lineage4.7 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.5 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1915476 | Other | La1.2.BCG | None | SRR1915488 | Other | La1.2.BCG | None | SRR11662636 | MDR-TB | lineage2.2.1 | None | SRR7983756 | Other | La1.2.BCG | None | ERR4810938 | Pre-XDR-TB | lineage2.2.1 | cn | SRR12062484 | Pre-XDR-TB | lineage2.2.1 | None | SRR7453039 | Sensitive | lineage4.8 | None | SRR10321135 | Other | La1.2.BCG | None | SRR20969627 | HR-TB | lineage4.4.2 | None | ERR4816626 | HR-TB | lineage4.3.4.2 | gb | SRR6397481 | Sensitive | lineage4.1.2.1 | ca | SRR6930897 | XDR-TB | La1.2.BCG | None | SRR11662132 | MDR-TB | lineage2.2.1 | None | ERR4815533 | Other | La1.2.BCG | gb | ERR4819514 | HR-TB | lineage3 | gb | SRR7221303 | Other | La1.2.BCG | None | SRR13180348 | Other | La1.2.BCG | None | ERR9786357 | Sensitive | lineage4.8 | None | SRR7221299 | Other | La1.2.BCG | None | SRR25207380 | Pre-XDR-TB | lineage2.2.1 | None | SRR21747040 | MDR-TB | lineage2.2.1 | None | ERR9787219 | Sensitive | lineage6.1.2 | None | SRR1915489 | Other | La1.2.BCG | None | SRR13199725 | Other | La1.7.1 | None | SRR7221302 | Other | La1.2.BCG | None | SRR23961476 | Other | La1.7.1 | None | SRR28119736 | Other | lineage2.2.1 | None | ERR4799743 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR3804129 | Sensitive | lineage6.1.2 | None | DRR473960 | Sensitive | lineage2.1 | None | ERR4799862 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR21689894 | Other | La1.2.BCG | None | SRR7221304 | Other | La1.2.BCG | None | SRR25827674 | XDR-TB | lineage2.2.1.1;lineage3 | None | SRR28170786 | Other | La1.2.BCG | None | ERR12745253 | Sensitive | lineage4.7 | None | SRR7221301 | Other | La1.2.BCG | None | ERR2513736 | Sensitive | lineage1.1.3.1 | gb | ERR4817808 | Sensitive | lineage1.1.3.1 | None | SRR21277265 | Sensitive | lineage2.2.1 | None | SRR11662485 | Pre-XDR-TB | lineage2.2.1 | None | ERR4363287 | Other | La1.2.BCG | None | SRR13180373 | Other | La1.2.BCG | None | ERR2707156 | MDR-TB | lineage4.3.3 | cd | SRR12062480 | Pre-XDR-TB | lineage2.2.1 | None | SRR7221300 | Other | La1.2.BCG | None | SRR15316015 | Sensitive | lineage4.5 | None | ERR2229727 | Sensitive | lineage4.8 | dk | SRR10040210 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423565 | Pre-XDR-TB | lineage2.2.1 | None | SRR21711113 | Sensitive | lineage4.8 | None | SRR28119731 | Other | lineage2.2.1 | None | SRR11662496 | MDR-TB | lineage1.1.1 | None | SRR6398108 | Sensitive | lineage4.1.2.1 | ca | ERR9786254 | Sensitive | lineage4.8 | None | SRR13199724 | Other | La1.7.1 | None |
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