Rv3696c - c.570_572dupGGG


Drug resistance types
313 Sensitive 21 RR-TB 24 HR-TB 62 MDR-TB 56 Pre-XDR-TB 2 XDR-TB 409 Other
lineage Counts
lineage Count
La1.2.BCG 360
lineage4.8 188
lineage2.2.1 103
lineage3 30
lineage4.1.2.1 16
lineage4.4.1.1 3
lineage1.1.1 8
lineage4.3.3 16
lineage1.1.3.1 13
lineage3;lineage4 1
La1.2.BCG;lineage1.1.1 1
lineage5.1 1
lineage4.3.4.2 6
lineage1.2.2.2 9
lineage4.2.2 2
lineage4.5 6
lineage4.1.1.1 5
La1.8.1 4
lineage1.2.1.2.1 8
lineage3.1.2.1 1
lineage2.2.1.1 14
lineage1.2.1.2 4
lineage6.3.1 1
lineage6.1.3 3
La1.2 4
lineage3;lineage4.8 1
lineage4.1.1.3 1
lineage4.4.2 4
M.canetti 1
lineage1.2.1 1
lineage2.2.1.2 5
La1.7.1 9
lineage6.1.1 2
lineage2.2.2 7
lineage4.1.1 4
La2 2
lineage1.1.1.1 2
La1.4 1
La1.3 1
lineage2.2.1;lineage3 1
lineage1.2.2.2;lineage2.2.1 1
lineage4.6.2.2 2
La1.2.BCG;La1.8.2 1
lineage1.1.2 7
La1.2.BCG;lineage4 1
lineage1.1.3.3 3
lineage4.3.4.2.1 3
lineage2.2.2;lineage4.9 1
lineage2.1 1
lineage3.1.2 1
La3 3
lineage4.6.1.1 2
lineage4.6.1 2
lineage3;lineage4.1.2.1 1
La1.7 1
lineage2.2.1;lineage4.5 1
lineage4.2.1 1
lineage1.1.3.2 1
lineage4.2.2.2 1
lineage4.9 2
lineage4.1 1
La1.2.BCG;La1.8.1;lineage4 1
spoligotype Counts
spoligotype Count
None 887
Geographic prevalence
Country level data for this variant is available for 277 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR387001 Other La1.2.BCG None
ERR2229520 Sensitive lineage4.8 dk
ERR2229457 Sensitive lineage4.8 dk
SRR15676437 Other La1.2.BCG None
SRR25515569 Pre-XDR-TB lineage2.2.1 None
ERR4811431 Sensitive lineage3 None
ERR3470564 Sensitive lineage4.1.2.1 None
ERR2653052 Sensitive lineage4.4.1.1 None
ERR4822429 Sensitive lineage4.8 None
ERR2503485 Sensitive lineage4.8 fi
SRR11662217 MDR-TB lineage1.1.1 None
SRR27450048 Other La1.2.BCG None
ERR5864486 Pre-XDR-TB lineage2.2.1 None
SRR16278275 Other La1.2.BCG None
ERR1949951 Sensitive lineage4.8 dk
SRR21733209 Sensitive lineage4.3.3 None
SRR10997361 MDR-TB La1.2.BCG None
ERR2229775 Sensitive lineage4.8 dk
DRR029468 Other La1.2.BCG None
SRR12199446 Other lineage1.1.3.1 None
ERR2815610 Other La1.2.BCG None
ERR4815226 Other La1.2.BCG gb
SRR7086716 Other La1.2.BCG None
SRR6045990 Other La1.2.BCG None
ERR2229464 Sensitive lineage4.8 dk
ERR4830701 Other lineage3;lineage4 dz
SRR16058167 Other La1.2.BCG None
SRR24799201 Other La1.2.BCG None
SRR11662636 MDR-TB lineage2.2.1 None
SRR17592376 Other La1.2.BCG None
SRR7069868 Other La1.2.BCG None
ERR2229139 Sensitive lineage4.8 None
ERR2724042 Sensitive lineage4.8 dk
ERR3273138 MDR-TB lineage4.3.3 None
ERR2228937 Sensitive lineage4.8 dk
SRR6046156 Other La1.2.BCG None
SRR13180287 Other La1.2.BCG None
SRR15676433 Other La1.2.BCG None
SRR1735681 Other La1.2.BCG gb
ERR2229680 Sensitive lineage4.8 dk
SRR7068937 Other La1.2.BCG None
ERR2229809 Sensitive lineage4.8 dk
SRR27450273 Other La1.2.BCG None
SRR21689653 Other La1.2.BCG;lineage1.1.1 None
SRR7070247 Other La1.2.BCG None
SRR10040457 MDR-TB lineage2.2.1 None
ERR1950073 Sensitive lineage4.8 dk
SRR21689921 Other La1.2.BCG None
SRR27450301 Sensitive lineage5.1 None
SRR18665451 Sensitive lineage4.3.4.2 None
SRR16100722 Other La1.2.BCG None
SRR21691049 Other La1.2.BCG None
SAMN02598956 Sensitive lineage1.2.2.2 in
SRR7069803 Other La1.2.BCG None
ERR2179692 Sensitive lineage4.2.2 cn
ERR11067503 Other La1.2.BCG None
ERR2228880 Sensitive lineage4.8 dk
ERR4819139 RR-TB La1.2.BCG None
ERR2229582 Sensitive lineage4.8 dk
SRR5485728 Other La1.2.BCG None
ERR1950015 Sensitive lineage4.8 dk
SRR12882495 Sensitive lineage3 None
SRR13423594 Pre-XDR-TB lineage2.2.1 None
SRR12142371 MDR-TB lineage4.5 None
SRR6046018 Other La1.2.BCG None
ERR2229817 Sensitive lineage4.8 dk
SRR27450628 Other La1.2.BCG None
SRR6650264 Sensitive lineage1.1.3.1 None
ERR2228907 Sensitive lineage4.8 None
ERR5866312 Pre-XDR-TB lineage2.2.1 None
ERR2229783 Sensitive lineage4.8 dk
ERR1950043 Sensitive lineage4.8 dk
SRR21690200 Other La1.2.BCG None
SRR15676438 Other La1.2.BCG None
ERR2228986 Sensitive lineage4.8 dk
SRR6832154 MDR-TB lineage2.2.1 None
SRR13180244 Other La1.2.BCG None
ERR766213 Other La1.2.BCG None
ERR4812730 MDR-TB lineage4.3.3 pe
ERR766226 Other La1.2.BCG None
ERR4820361 Other La1.2.BCG None
SRR7070062 RR-TB La1.2.BCG None
ERR1949971 Sensitive lineage4.8 None
ERR1950026 Sensitive lineage4.8 dk
SRR13180228 Other La1.2.BCG None
SRR27450475 Other La1.2.BCG None
SRR27450627 Other La1.2.BCG None
SRR5535927 Sensitive lineage1.2.2.2 None
ERR4821440 Other La1.2.BCG None
ERR2228958 Sensitive lineage4.8 dk
ERR2229706 Sensitive lineage4.8 dk
SRR7086715 Other La1.2.BCG None
ERR9899661 Other La1.2.BCG None
ERR4829543 Other La1.2.BCG it
ERR2851372 Sensitive lineage4.1.1.1 lb
SRR1792241 Other La1.8.1 None
ERR4817646 Other La1.2.BCG None
ERR12115304 MDR-TB lineage1.1.3.1 None
SRR6397986 Sensitive lineage4.1.2.1 ca
ERR4195591 Other La1.2.BCG None
ERR2229004 Sensitive lineage4.8 dk
ERR1950018 Sensitive lineage4.8 dk
SRR21690702 Other La1.2.BCG None
SRR11662412 Pre-XDR-TB lineage2.2.1 None
ERR2229053 Sensitive lineage4.8 dk
ERR2228895 Sensitive lineage4.8 dk
SRR16370265 HR-TB lineage4.1.2.1 None
ERR1949961 Sensitive lineage4.8 dk
ERR766220 Other La1.2.BCG None
ERR766220 Other La1.2.BCG None
SRR9596060 Other La1.2.BCG None
ERR4819826 Other La1.2.BCG None
ERR5864485 Pre-XDR-TB lineage2.2.1 None
SRR6930897 XDR-TB La1.2.BCG None
SRR19303794 HR-TB lineage1.2.1.2.1 None
SRR18911229 Other La1.2.BCG None
ERR4798335 Sensitive lineage3.1.2.1 in
SRR28170738 Other La1.2.BCG None
ERR4799743 Pre-XDR-TB lineage2.2.1.1 in
ERR3287453 MDR-TB lineage2.2.1 pe
SRR18911137 Sensitive lineage1.1.3.1 None
SRR21576731 RR-TB lineage2.2.1 None
SRR27450474 Other La1.2.BCG None
SRR12882483 Sensitive lineage1.2.1.2 None
SRR27450473 Other La1.2.BCG None
SRR26400044 HR-TB lineage2.2.1 None
SRR7069083 Other La1.2.BCG None
ERR4192348 Sensitive lineage6.3.1 None
ERR2229749 Sensitive lineage4.8 None
ERR11068638 Other La1.2.BCG None
ERR11044416 Sensitive lineage4.8 None
ERR2228845 Sensitive lineage4.8 dk
ERR1023231 Other lineage6.1.3 None
ERR2228865 Sensitive lineage4.8 dk
SRR8648478 Other La1.2.BCG None
SRR13046682 Other La1.2 None
ERR9786407 Sensitive lineage3;lineage4.8 None
ERR2229571 Sensitive lineage4.8 dk
SRR17592380 Other La1.2.BCG None
SRR11662446 MDR-TB lineage4.5 None
ERR1949995 Sensitive lineage4.8 dk
ERR2513774 Sensitive lineage3 gb
ERR1950057 Sensitive lineage4.8 dk
SRR7496578 Other La1.2.BCG None
ERR4817185 Other La1.2.BCG gb
SRR10040149 MDR-TB lineage2.2.1 None
ERR2228861 RR-TB lineage4.8 dk
DRR130056 MDR-TB lineage4.1.1.3 None
SRR5875882 Other La1.2.BCG None
SRR10305757 Sensitive lineage4.4.2 None
SRR27450228 Other La1.2.BCG None
ERR11044175 Other La1.2.BCG None
SRR21277383 Sensitive lineage2.2.1 None
ERR4814591 Other La1.2.BCG None
ERR2229196 Sensitive lineage4.8 dk
ERR9125787 Other La1.2.BCG None
SRR15316288 HR-TB lineage2.2.1 None
SRR7453052 Sensitive lineage4.8 None
SRR16058482 Other La1.2.BCG None
SRR21277265 Sensitive lineage2.2.1 None
SRR15368826 Sensitive lineage2.2.1 None
ERR2229808 Sensitive lineage4.8 dk
SRR7086712 Other La1.2.BCG None
ERR4830456 Sensitive lineage2.2.1 vn
ERR4819927 Other M.canetti None
ERR2229713 Sensitive lineage4.8 dk
ERR2229286 Sensitive lineage4.8 dk
ERR2229286 Sensitive lineage4.8 dk
SRR27450626 Other La1.2.BCG None
SRR17592387 Other La1.2.BCG None
ERR4811766 Sensitive lineage4.3.3 pe
SRR28170801 Other La1.2.BCG None
SRR26399220 Sensitive lineage2.2.1 None
SRR10232124 Other La1.2.BCG None
ERR9811808 Other La1.2.BCG None
SRR27450170 Other La1.2.BCG None
ERR117679 Sensitive lineage1.1.3.1 None
ERR1949979 Sensitive lineage4.8 dk
ERR2517495 Other La1.2.BCG nl
SRR24083716 Sensitive lineage1.1.1 None
SRR28170708 Other La1.2.BCG None
SRR13399343 Other La1.2.BCG None
ERR4810909 Sensitive lineage4.5 cn
ERR2228863 Sensitive lineage4.8 dk
ERR11067938 Other La1.2.BCG None
ERR3256226 MDR-TB lineage1.2.1.2 ph
SRR10321131 Other La1.2.BCG None
ERR4811390 Sensitive lineage3 None
ERR4813412 Pre-XDR-TB lineage2.2.1 pe
SRR10040160 MDR-TB lineage2.2.1 None
ERR3275257 Sensitive lineage4.1.1.1 nl
SRR27450275 Other La1.2.BCG None
SRR24222963 Other La1.2.BCG None
SRR14636667 Sensitive lineage1.2.1 None
SRR22424778 RR-TB lineage2.2.1.1 None
ERR2229280 Sensitive lineage4.8 dk
SRR17657961 Other lineage2.2.1.2 None
SRR27450619 Other La1.2.BCG None
ERR1334033 Other lineage6.1.3 None
ERR9786779 Sensitive lineage4.8 None
ERR2228927 Sensitive lineage4.8 dk
ERR9119419 Sensitive lineage2.2.1 None
ERR2229419 Sensitive lineage4.8 dk
SRR18391641 Other La1.7.1 es
ERR2229734 Sensitive lineage4.8 dk
SRR13180304 Other La1.2.BCG None
ERR766246 Other La1.2.BCG None
ERR4821698 Other La1.2.BCG None
ERR4816167 Other La1.2.BCG gb
ERR2229735 Sensitive lineage4.8 dk
SRR23961476 Other La1.7.1 None
ERR2229759 Sensitive lineage4.8 None
ERR11068110 Other La1.2.BCG None
SRR12062484 Pre-XDR-TB lineage2.2.1 None
ERR2228862 Sensitive lineage4.8 dk
SRR18909919 Other lineage3 None
ERR11067543 Other La1.2.BCG None
ERR9787338 Sensitive lineage6.1.1 None
SRR3135072 Other La1.8.1 None
ERR4819662 Other lineage3 gb
ERR2228848 Sensitive lineage4.8 dk
ERR4820855 Other La1.2.BCG gb
ERR7801268 Sensitive lineage2.2.1 None
ERR551685 Sensitive lineage4.3.3 cg
ERR4810525 Other lineage2.2.1 cn
ERR2229567 Sensitive lineage4.8 dk
SRR10321135 Other La1.2.BCG None
ERR766218 Other La1.2.BCG None
SRR21576545 RR-TB lineage4.4.2 None
SRR7070106 RR-TB La1.2.BCG None
ERR4830386 Sensitive lineage2.2.2 vn
SRR17592375 Other La1.2.BCG None
ERR9121179 Other La1.7.1 None
ERR4799231 HR-TB lineage2.2.1.1 in
SRR22048335 Sensitive lineage1.1.3.1 None
SRR15723184 HR-TB lineage2.2.1 None
SRR10997355 Other La1.2.BCG None
SRR13870373 Pre-XDR-TB lineage4.1.1 None
ERR11044420 Sensitive lineage4.8 None
ERR1950030 Sensitive lineage4.8 dk
ERR2179783 Other lineage4.5 cn
ERR2228940 Sensitive lineage4.8 dk
ERR2228857 Sensitive lineage4.8 dk
ERR1462611 Sensitive La2 None
ERR4820965 Other La1.2.BCG gb
SAMEA2534536 Sensitive lineage1.1.1.1 None
ERR2843502 Sensitive lineage2.2.1 None
SAMN02231121 HR-TB lineage4.1.2.1 None
ERR9121663 Other La1.2.BCG None
ERR9786136 Sensitive lineage4.8 None
ERR2228864 Sensitive lineage4.8 dk
SRR10040386 Pre-XDR-TB lineage2.2.1 None
ERR9119286 HR-TB lineage2.2.1 None
ERR1949967 Sensitive lineage4.8 dk
SRR7070364 Other La1.2.BCG None
ERR2228961 Sensitive lineage4.8 dk
SAMN02414848 Other La1.2.BCG se
ERR2179827 Sensitive lineage4.5 cn
ERR1949998 Sensitive lineage4.8 dk
SRR11662345 MDR-TB lineage1.1.1 None
ERR2228962 Sensitive lineage4.8 dk
ERR11044379 Other La1.2.BCG None
SRR18911455 Other La1.2.BCG None
ERR2229800 Sensitive lineage4.8 dk
SRR17657972 Other lineage2.2.1.2 None
ERR2229740 Sensitive lineage4.8 dk
ERR9786458 Sensitive lineage4.8 None
ERR2229755 Sensitive lineage4.8 dk
SRR27450620 Other La1.2.BCG None
ERR11049946 Other La1.4 None
ERR2229564 Sensitive lineage4.8 dk
SRR20969584 HR-TB lineage2.2.1 None
SRR8065085 Other La1.3 None
SRR14782778 Sensitive lineage4.8 None
SRR10854751 MDR-TB lineage4.3.4.2 None
SRR20969455 Pre-XDR-TB lineage2.2.1 None
ERR4829650 Other La1.2.BCG None
ERR11050977 Sensitive lineage3 None
SRR5341434 Pre-XDR-TB lineage3 in
ERR4799862 Pre-XDR-TB lineage2.2.1.1 in
ERR2229460 Sensitive lineage4.8 dk
SRR21675693 Sensitive lineage4.1.2.1 None
ERR2229665 Sensitive lineage4.8 dk
DRR029469 Other La1.2.BCG None
ERR9896175 Other lineage4.8 None
SRR12420551 Other lineage2.2.1 None
ERR4820706 Other La1.2.BCG None
SRR18914232 Sensitive lineage4.1.1.1 None
SRR18909921 Sensitive lineage1.1.3.1 None
SRR7069934 Sensitive lineage1.1.1 None
SRR21277533 Sensitive lineage2.2.1 None
SRR21747038 MDR-TB lineage1.1.3.1 None
SRR7086717 Other La1.2.BCG None
SRR5341224 Sensitive lineage2.2.1;lineage3 in
ERR2229061 Sensitive lineage4.8 dk
SRR9593166 Other La1.2.BCG None
SRR6831794 MDR-TB lineage2.2.1 None
ERR4816682 Other La1.2.BCG gb
SRR15316044 Sensitive lineage2.2.1 None
SRR21277852 Pre-XDR-TB lineage2.2.1.1 None
SRR5341243 Other lineage1.2.2.2;lineage2.2.1 in
SRR21277683 Pre-XDR-TB lineage2.2.1 None
SRR26399842 MDR-TB lineage2.2.1 None
ERR2229458 RR-TB lineage4.8 dk
SRR7453040 Sensitive lineage4.8 None
ERR9896146 Other lineage4.6.2.2 None
SRR10997362 MDR-TB La1.2.BCG None
ERR2228968 Sensitive lineage4.8 dk
SAMN02360596 Pre-XDR-TB lineage2.2.2 kr
ERR2229052 Other lineage4.8 None
ERR2229390 Sensitive lineage4.8 dk
ERR4821117 Other La1.2.BCG None
SRR13986557 Other La1.2.BCG;La1.8.2 None
ERR2229087 Sensitive lineage4.8 dk
ERR5864482 Pre-XDR-TB lineage2.2.1 None
ERR2512396 Other lineage1.1.2 gb
ERR2229483 Sensitive lineage4.8 None
ERR4810938 Pre-XDR-TB lineage2.2.1 cn
SRR23961496 Other La1.7.1 None
ERR2229721 Sensitive lineage4.8 dk
ERR2228901 Sensitive lineage4.8 dk
SRR10040378 MDR-TB lineage2.2.1 None
DRR130112 MDR-TB lineage2.2.1 None
ERR4811441 Sensitive lineage3 None
SRR10321147 Other La1.2.BCG None
SRR24222985 Other La1.2.BCG None
SRR21732254 HR-TB lineage1.2.1.2.1 None
ERR2517304 Other La1.2.BCG;lineage4 nl
SRR17592368 Other La1.2.BCG None
ERR2229619 Sensitive lineage4.8 dk
SRR7069595 Other La1.2.BCG None
ERR2229025 Sensitive lineage4.8 None
SRR11662485 Pre-XDR-TB lineage2.2.1 None
SRR27450609 Other La1.2.BCG None
SRR6824383 MDR-TB lineage2.2.1 cn
SRR16058264 Other La1.2.BCG None
SRR15676434 Other La1.2.BCG None
ERR2229790 Sensitive lineage4.8 dk
ERR4363287 Other La1.2.BCG None
SRR17657951 Sensitive lineage1.2.1.2.1 None
SRR10232123 Other La1.2.BCG None
ERR12115320 Other lineage1.2.2.2 None
ERR4820780 RR-TB La1.2.BCG gb
DRR130131 MDR-TB lineage1.2.1.2.1 None
SRR25206907 Pre-XDR-TB lineage2.2.1 None
ERR2229469 Sensitive lineage4.8 None
SRR24827274 Other La1.2.BCG None
ERR4820328 Other lineage3 gb
ERR2228908 Sensitive lineage4.8 dk
ERR2229776 Sensitive lineage4.8 dk
SRR13180234 Other La1.2.BCG None
ERR1950002 Sensitive lineage4.8 None
ERR1950090 Sensitive lineage4.8 dk
SRR7221302 Other La1.2.BCG None
SRR10997358 RR-TB La1.2.BCG None
SRR7070400 Other La1.2.BCG None
SRR13180285 Other La1.2.BCG None
SRR14807675 Other La1.2.BCG None
SRR17111226 Other La2 None
SRR17592386 Other La1.2.BCG None
ERR4822052 Other La1.2.BCG None
SRR28170778 Other La1.2.BCG None
SRR13180373 Other La1.2.BCG None
SRR7086711 Other La1.2.BCG None
ERR3148170 Pre-XDR-TB lineage4.3.4.2 mx
SRR13199758 Other La1.2 None
ERR4821182 HR-TB lineage1.1.3.3 gb
SRR7069801 Other La1.2.BCG None
ERR4811411 Sensitive lineage3 None
SRR27450471 Other La1.2.BCG None
ERR5102810 Other La1.2.BCG None
ERR9125888 Other La1.2.BCG None
SRR13180255 Other La1.2.BCG None
ERR11043503 Other La1.2.BCG None
SRR10430327 Other La1.2.BCG None
ERR1035034 Pre-XDR-TB lineage4.3.4.2.1 za
ERR2228997 Sensitive lineage4.8 dk
ERR5866311 Pre-XDR-TB lineage2.2.1 None
SRR6832028 MDR-TB lineage2.2.1 None
SRR1165461 Other La1.2.BCG None
SRR1735567 Other La1.2.BCG None
ERR4820186 Other La1.2.BCG None
SRR27450274 Other La1.2.BCG None
ERR3256266 HR-TB lineage1.2.1.2.1 ph
SRR16295814 Other lineage2.2.1 None
ERR9125703 Other La1.2.BCG None
SRR25340857 Sensitive lineage1.1.2 None
SRR17657987 MDR-TB lineage2.2.1 None
SRR18897163 Other La1.2.BCG None
ERR4816666 Other La1.2.BCG gb
SRR7236189 Other La1.8.1 None
ERR766247 Other La1.2.BCG None
ERR4830714 Other lineage3 dz
SRR15316613 Sensitive lineage2.2.1 None
ERR2228989 Sensitive lineage4.8 dk
ERR4816626 HR-TB lineage4.3.4.2 gb
DRR130065 Pre-XDR-TB lineage2.2.2;lineage4.9 None
ERR766223 Other La1.2.BCG None
SRR1735706 Other La1.2.BCG gb
ERR11068388 Other La1.2.BCG None
ERR2228873 Other lineage4.8 None
ERR3039932 Sensitive lineage1.1.2 None
SRR28119736 Other lineage2.2.1 None
ERR2229075 Sensitive lineage4.8 dk
SRR16089542 Other La1.2.BCG None
SRR28170784 Other La1.2.BCG None
SRR8648485 Other La1.2.BCG None
ERR2228856 Sensitive lineage4.8 dk
SRR9596063 Other La1.2.BCG None
SRR7070034 Other La1.2.BCG None
SRR11662456 MDR-TB lineage2.2.1 None
SRR24083661 Sensitive lineage2.2.1 None
ERR4821455 Other La1.2.BCG gb
ERR4818633 Other lineage3 gb
SRR25207184 Pre-XDR-TB lineage2.2.1 None
SRR6397481 Sensitive lineage4.1.2.1 ca
ERR2229681 Sensitive lineage4.8 dk
SRR6832844 MDR-TB lineage2.2.1 None
ERR1023246 Other lineage6.1.3 None
SRR11662132 MDR-TB lineage2.2.1 None
ERR2229150 Sensitive lineage4.8 dk
ERR5758406 Pre-XDR-TB lineage4.3.4.2.1 None
SRR10997354 Other La1.2.BCG None
SRR21690106 Other La1.2.BCG None
ERR11050992 Other La1.2.BCG None
ERR2228913 Sensitive lineage4.8 dk
SRR10997356 Other La1.2.BCG None
SRR9596067 Other La1.2.BCG None
SRR26112194 Sensitive lineage4.1.2.1 None
SRR21277338 Sensitive lineage2.2.1 None
SRR21689783 Other La1.2.BCG None
SRR12062480 Pre-XDR-TB lineage2.2.1 None
ERR9125853 Other La1.2.BCG None
SRR28170803 Other La1.2.BCG None
DRR473960 Sensitive lineage2.1 None
SRR1735703 Other La1.2.BCG gb
SRR14334194 Pre-XDR-TB lineage2.2.1 None
ERR2228855 Sensitive lineage4.8 dk
ERR4195680 Other La1.7.1 None
SRR16089408 Other La1.2.BCG None
SRR9596066 Other La1.2.BCG None
SRR27450616 Other La1.2.BCG None
SRR21689504 Other La1.2.BCG None
ERR2228876 Sensitive lineage4.8 dk
ERR1950006 Sensitive lineage4.8 dk
ERR4811423 Sensitive lineage3 None
ERR2228992 Sensitive lineage4.8 dk
ERR4800498 Sensitive lineage1.2.2.2 in
SRR21690370 Other La1.2.BCG None
SRR5341286 Pre-XDR-TB lineage2.2.1.1 in
ERR11049331 Other La1.2.BCG None
SRR25207220 Pre-XDR-TB lineage2.2.1 None
SRR13180318 Other La1.2.BCG None
SRR8102332 Other La1.2.BCG None
ERR11049910 Sensitive lineage3 None
ERR2228964 Sensitive lineage4.8 dk
ERR2653063 Pre-XDR-TB lineage4.4.1.1 None
SRR11972200 Sensitive lineage2.2.1 None
ERR4812671 Sensitive lineage4.1.2.1 None
ERR4829633 Other La1.2.BCG it
ERR4817805 Sensitive lineage2.2.1 gb
SRR15676436 Other La1.2.BCG None
ERR2228949 Sensitive lineage4.8 dk
SRR7221300 Other La1.2.BCG None
SRR21689777 Other La1.2.BCG None
ERR2229753 Sensitive lineage4.8 dk
SRR13399337 Other La1.2.BCG None
ERR1193849 Sensitive lineage4.3.3 cg
SRR27450603 Other La1.2.BCG None
SRR17592374 Other La1.2.BCG None
SRR21689937 Other La1.2.BCG None
ERR11067904 Other La1.2.BCG None
SRR7221303 Other La1.2.BCG None
SRR6398091 MDR-TB lineage2.2.1 ca
SRR14520084 Sensitive lineage1.2.1.2.1 None
SRR7086718 Other La1.2.BCG None
SRR8648483 Other La1.2.BCG None
SRR26399821 Sensitive lineage2.2.2 None
ERR2229806 Sensitive lineage4.8 dk
SRR13399330 Other La1.2.BCG None
ERR11049026 Other La1.2.BCG None
SRR27450618 Other La1.2.BCG None
SRR5341232 HR-TB lineage3.1.2 in
SRR23862096 Sensitive lineage2.2.1 None
SRR27450272 Other La1.2.BCG None
ERR2229212 Sensitive lineage4.8 dk
ERR2228946 Sensitive lineage4.8 dk
SRR5535856 Sensitive lineage4.3.3 None
SRR21277180 MDR-TB lineage4.4.2 None
ERR2228914 Sensitive lineage4.8 dk
ERR2229778 Sensitive lineage4.8 dk
SRR10303300 Other La1.2.BCG None
SRR18910210 Other lineage3 None
SRR18910210 Other lineage3 None
SRR14802224 Other La1.2.BCG None
ERR4819762 Other La1.2.BCG None
SRR6389908 Sensitive lineage4.3.3 gt
SRR7069368 Other La1.2.BCG None
SRR21689494 Sensitive lineage4.8 None
SRR27450608 Other La1.2.BCG None
ERR2228850 Sensitive lineage4.8 dk
ERR2229725 Sensitive lineage4.8 dk
ERR2229767 Sensitive lineage4.8 dk
SRR6831719 Pre-XDR-TB lineage2.2.1 None
ERR2229488 Sensitive lineage4.8 dk
ERR4811454 Sensitive lineage3 None
ERR5102811 Other La1.2.BCG None
SRR14782268 Other La1.2.BCG None
SRR17592379 Other La1.2.BCG None
ERR4818704 Other La1.2.BCG gb
SAMN02360608 Pre-XDR-TB lineage2.2.2 kr
SRR17592382 Other La1.2.BCG None
ERR2228824 Sensitive lineage4.8 None
SRR7069581 Other La1.2.BCG None
ERR2229350 Sensitive lineage4.8 dk
SRR7086714 Other La1.2.BCG None
SRR6045962 Other La3 gb
ERR1950005 Sensitive lineage4.8 dk
SRR13199732 Other La1.7.1 None
SRR11662551 MDR-TB lineage2.2.1 None
SRR13399333 Other La1.2.BCG None
SRR6046614 Other La1.2.BCG None
ERR4820690 Sensitive lineage4.1.1 gb
ERR1950044 Sensitive lineage4.8 dk
ERR4816052 Other La1.2.BCG None
ERR7975676 MDR-TB lineage2.2.1 None
SRR28045099 MDR-TB lineage1.1.2 None
SRR28044340 Other La1.2.BCG None
SRR28045784 Sensitive lineage1.2.2.2 None
SRR28409495 Other La1.2.BCG None
SRR28351329 Pre-XDR-TB lineage2.2.1 None
SRR28045809 XDR-TB lineage2.2.1.1 None
SRR28044924 Sensitive lineage3 None
SRR28409560 Other La1.2.BCG None
SRR23961471 Other La1.7.1 None
ERR2510870 Pre-XDR-TB lineage2.2.1.1 pk
ERR4816011 Other La1.2.BCG gb
ERR4819733 Other La1.2.BCG gb
ERR4820009 Other La1.2.BCG gb
ERR4829038 Other La1.2.BCG it
ERR2517166 Other La1.2.BCG nl
ERR2228854 Sensitive lineage4.8 dk
SRR27450370 Other La1.2.BCG None
SRR11662496 MDR-TB lineage1.1.1 None
ERR1950001 Sensitive lineage4.8 dk
SRR6797667 Sensitive lineage1.1.3.1 None
SRR27450621 Other La1.2.BCG None
ERR2514659 Sensitive lineage1.1.1 gb
SRR21689633 Sensitive lineage4.1.2.1 None
ERR5864484 Pre-XDR-TB lineage2.2.1 None
ERR766221 Other La1.2.BCG None
SRR7221301 Other La1.2.BCG None
ERR4832019 MDR-TB lineage2.2.1 vn
SRR9593176 Other La1.2.BCG None
SRR9596070 Other La1.2.BCG None
ERR2512505 Sensitive lineage4.1.1 gb
ERR4797938 HR-TB lineage3 in
ERR2707232 RR-TB lineage4.3.3 cd
ERR2229703 Sensitive lineage4.8 dk
SRR13399336 Other La1.2.BCG None
ERR2517179 Other La1.2.BCG nl
SRR15316592 Sensitive lineage2.2.1 None
ERR11067380 Other La1.2.BCG None
ERR2229045 Sensitive lineage4.8 dk
SRR7086713 Other La1.2.BCG None
ERR11081868 Sensitive lineage4.8 None
ERR11049134 Sensitive lineage4.8 None
ERR4799334 Sensitive lineage2.2.1.1 None
ERR2229583 Sensitive lineage4.8 dk
ERR4816465 Other La1.2.BCG gb
SRR17592384 Other La1.2.BCG None
SRR5341244 Pre-XDR-TB lineage1.2.2.2 in
ERR2228945 Sensitive lineage4.8 dk
ERR766225 Other La1.2.BCG None
SRR22048300 RR-TB lineage4.1.2.1 None
SRR13399332 Other La1.2.BCG None
SRR3675315 Other La1.2.BCG None
ERR4829066 MDR-TB lineage2.2.1 ng
ERR4818819 Other La1.2.BCG gb
SRR13767788 Other La1.2.BCG None
ERR4819796 Sensitive lineage1.2.2.2 gb
ERR2513516 Sensitive lineage2.2.1 gb
SRR12199449 Sensitive lineage1.2.2.2 None
ERR9125558 Other La1.2.BCG None
SRR21689894 Other La1.2.BCG None
SRR13046675 Other La1.2 None
ERR1950041 Sensitive lineage4.8 dk
ERR2229812 Sensitive lineage4.8 None
SRR27450472 Other La1.2.BCG None
ERR2229023 Sensitive lineage4.8 dk
ERR9786977 Sensitive lineage4.8 None
SRR20969846 MDR-TB lineage2.2.1 None
SRR13399341 Other La1.2.BCG None
ERR4800150 HR-TB lineage3 None
ERR766219 Other La1.2.BCG None
SRR10251198 Other La3 None
SRR16058128 Other La1.2.BCG None
SRR9596069 RR-TB La1.2.BCG None
ERR2228969 Sensitive lineage4.8 dk
SRR13399338 Other La1.2.BCG None
SRR7070076 Other La1.2.BCG None
SRR13399331 Other La1.2.BCG None
ERR11049655 Other La1.2.BCG None
SAMN02381035 Sensitive lineage4.6.1.1 None
SAMN02381035 Sensitive lineage4.6.1.1 None
SRR21576730 RR-TB lineage2.2.1 None
ERR4828354 Sensitive lineage2.2.1 vn
SRR6046112 Sensitive lineage4.1.1 gb
ERR4819463 Other La1.2.BCG None
SRR10040210 Pre-XDR-TB lineage2.2.1 None
ERR2228944 Sensitive lineage4.8 dk
ERR4831182 Other La1.2.BCG de
SRR21689499 Other La1.2.BCG None
SRR17592385 Other La1.2.BCG None
SRR7069678 RR-TB La1.2.BCG None
ERR212052 Other La1.2.BCG mw
ERR1950031 Sensitive lineage4.8 dk
ERR4797984 Other La1.2.BCG in
ERR4816595 Other La1.2.BCG gb
ERR2815602 Other La1.2.BCG None
ERR2229426 Sensitive lineage4.8 dk
SRR1735643 Other La1.2.BCG gb
ERR2228792 Sensitive lineage4.8 dk
ERR4815826 Sensitive lineage3 gb
SRR21689974 Other La1.2.BCG None
SRR14802226 Other La1.2.BCG None
SRR21576692 MDR-TB lineage1.2.1.2.1 None
SRR26112105 HR-TB lineage4.1.2.1 None
ERR4828010 MDR-TB lineage2.2.1 None
ERR8025683 Pre-XDR-TB lineage4.3.3 None
SRR9593169 Other La1.2.BCG None
SRR21747041 MDR-TB lineage2.2.1 None
SRR28170786 Other La1.2.BCG None
ERR2229660 Sensitive lineage4.8 None
SRR7069799 Other La1.2.BCG None
SRR21690238 Other La1.2.BCG None
SRR19303899 Other lineage3 None
SRR6397385 Sensitive lineage4.1.2.1 ca
SRR15316567 Sensitive lineage4.4.2 None
ERR766258 Other La1.2.BCG None
SRR26111991 Sensitive lineage3 None
SRR11662612 Pre-XDR-TB lineage1.1.3.3 None
SRR7221299 Other La1.2.BCG None
SRR28045652 MDR-TB lineage1.1.3.3 None
SRR28026766 Other La1.2.BCG None
SRR28045982 Sensitive lineage4.1.2.1 None
SRR28409452 Other La1.2.BCG None
SRR28389826 RR-TB lineage4.8 None
SRR28170826 Other La1.2.BCG None
SRR28046224 Other La1.2.BCG None
SRR28170851 Other La1.2.BCG None
SRR27069413 RR-TB lineage2.2.1 None
SRR28375406 Other La1.2.BCG None
SRR28044796 Other La1.2.BCG None
SRR28409473 Sensitive lineage4.1.2.1 None
SRR28409394 Other La1.2.BCG None
SRR28409343 Other La1.2.BCG None
SRR28409494 Other La1.2.BCG None
SRR28409351 Other La1.2.BCG None
SRR28046304 RR-TB La1.2.BCG None
SRR27980498 Other lineage4.3.4.2 None
SRR28046223 Other La1.2.BCG None
SRR28045563 Pre-XDR-TB lineage2.2.1.1 None
ERR4829548 Other La1.2.BCG it
ERR4819270 Other La1.2.BCG gb
ERR4820343 Other La1.2.BCG gb
ERR4822011 Other La1.2.BCG gb
ERR4820908 HR-TB lineage1.2.2.2 gb
ERR4822100 Other La1.2.BCG None
SRR13180347 Other La1.2.BCG None
SRR9596065 Other La1.2.BCG None
ERR11081620 Sensitive lineage3 None
SRR11972307 MDR-TB lineage2.2.1 None
ERR2229029 Sensitive lineage4.8 dk
ERR1949991 Sensitive lineage4.8 None
ERR2179836 Sensitive lineage3 None
SRR11662476 MDR-TB lineage2.2.1 None
SRR17657986 MDR-TB lineage2.2.1 None
SRR1735707 Other La1.2.BCG None
SRR13199720 Other La1.7.1 None
SRR13180379 Other La1.2.BCG None
ERR1950076 Sensitive lineage4.8 dk
SRR12420340 Sensitive lineage2.2.1 None
ERR9786208 Sensitive lineage4.8 None
ERR5864487 Pre-XDR-TB lineage2.2.1 None
SRR24222960 Other La1.2.BCG None
ERR2229013 Sensitive lineage4.8 dk
ERR3256178 MDR-TB lineage1.2.1.2 ph
ERR5864483 Pre-XDR-TB lineage2.2.1 None
SRR21576588 MDR-TB lineage2.2.1.2 None
SRR9593174 Other La1.2.BCG None
SRR15368839 Pre-XDR-TB lineage2.2.1.1 None
ERR2228869 Sensitive lineage4.8 dk
SRR3647355 Other La1.2.BCG None
ERR11042969 Pre-XDR-TB lineage2.2.1 None
ERR2229015 Sensitive lineage4.8 dk
ERR4811415 Sensitive lineage4.6.2.2 None
ERR2516311 Other La1.2.BCG be
SRR13199751 Other La1.7.1 None
SRR21689447 Sensitive lineage4.1.2.1 None
ERR2200053 Sensitive lineage4.8 de
ERR2228973 Sensitive lineage4.8 dk
SRR5341421 Pre-XDR-TB lineage2.2.1.1 None
ERR2707226 Sensitive lineage4.6.1 cd
SRR6357004 Pre-XDR-TB lineage2.2.1 None
SRR19115679 Sensitive lineage1.1.3.1 None
SRR7070225 Other La1.2.BCG None
ERR1949960 Sensitive lineage4.8 dk
ERR11050679 Other La1.2.BCG None
ERR12115318 Sensitive lineage6.1.1 None
SRR24035883 HR-TB lineage4.8 None
ERR2229699 Sensitive lineage4.8 dk
ERR4811434 Sensitive lineage3 None
SRR10040411 MDR-TB lineage2.2.2 None
ERR2228988 Sensitive lineage4.8 dk
ERR2229467 Sensitive lineage4.8 dk
ERR2229472 Sensitive lineage4.8 dk
SRR24222962 Other La1.2.BCG None
ERR4821283 Other lineage3;lineage4.1.2.1 gb
ERR560451 Other La1.2.BCG None
SRR13986561 Other La1.7 None
ERR4814867 Other La1.2.BCG gb
SRR16089681 Other La1.2.BCG None
SRR27449962 Other La1.2.BCG None
SRR3675257 Other La1.2.BCG gb
ERR4798155 Pre-XDR-TB lineage2.2.1.1 in
ERR2513736 Sensitive lineage1.1.3.1 gb
SRR10997359 Other La1.2.BCG None
ERR4818639 Other La1.2.BCG None
ERR4819451 Other La1.2.BCG None
ERR2229736 Other lineage4.8 dk
ERR2228858 Sensitive lineage4.8 dk
ERR1193844 Sensitive lineage4.3.3 cg
ERR766243 Other La1.2.BCG None
SRR21747017 MDR-TB lineage2.2.1;lineage4.5 None
SRR13014435 Other La1.2.BCG None
SRR13180338 Other La1.2.BCG None
SRR6650413 Sensitive lineage1.1.3.1 None
SRR14801882 Other La1.2.BCG None
SRR21690269 Other La1.2.BCG None
SRR17592369 Other La1.2.BCG None
SRR17658034 Other lineage2.2.1.2 None
SRR21690901 Other La1.2.BCG None
ERR1949974 Sensitive lineage4.8 dk
SRR6832697 Sensitive lineage4.2.1 None
ERR2228892 Sensitive lineage4.8 dk
ERR2229733 Other lineage4.8 dk
ERR766245 Other La1.2.BCG None
ERR3256177 MDR-TB lineage1.2.1.2 ph
SRR22424885 HR-TB lineage4.1.2.1 None
SRR8648481 Other La1.2.BCG None
SRR1915476 Other La1.2.BCG None
SRR15676435 Other La1.2.BCG None
ERR2229651 Sensitive lineage4.8 dk
ERR1950007 Sensitive lineage4.8 dk
ERR4810670 Sensitive lineage2.2.1 cn
ERR6338299 Other La1.2 None
SRR28170722 Other La1.2.BCG None
ERR2229017 Sensitive lineage4.8 dk
ERR1199119 Sensitive lineage4.6.1 cd
SRR7221304 Other La1.2.BCG None
ERR2446354 Sensitive lineage4.1.1.1 nl
ERR228166 Other La1.2.BCG None
SRR6832196 Sensitive lineage4.8 None
SRR10321153 RR-TB La1.2.BCG None
SRR21690286 Other La1.2.BCG None
ERR552276 Sensitive lineage1.1.1.1 None
SRR7585397 Pre-XDR-TB lineage2.2.1 in
SRR2100242 Sensitive lineage1.1.3.1 None
SRR13180278 Other La1.2.BCG None
SRR10232122 Other La1.2.BCG None
SRR10997357 Other La1.2.BCG None
SRR28170799 Other La1.2.BCG None
ERR560450 Other La1.2.BCG None
SRR27450197 Other La1.2.BCG None
ERR2228951 Sensitive lineage4.8 dk
ERR9119403 Sensitive lineage2.2.2 None
SRR16089543 Other La1.2.BCG None
SRR7069887 Other La1.2.BCG None
SRR13399334 Other La1.2.BCG None
SRR15316015 Sensitive lineage4.5 None
ERR2229048 Sensitive lineage4.8 dk
ERR1950010 Sensitive lineage4.8 None
ERR1949984 Sensitive lineage4.8 dk
ERR1949986 Sensitive lineage4.8 None
DRR130213 Pre-XDR-TB lineage2.2.1 None
ERR4830382 HR-TB lineage2.2.1 vn
SRR25207126 MDR-TB lineage2.2.1.2 None
SRR16097556 Other La1.2.BCG None
ERR7902671 Sensitive lineage1.1.3.2 None
ERR11044218 Sensitive lineage4.3.3 None
ERR1950079 Sensitive lineage4.8 dk
DRR261187 Sensitive lineage1.1.1 None
ERR2200003 Sensitive lineage4.8 de
SRR15676439 Other La1.2.BCG None
SRR18897169 Other La1.2.BCG None
SRR21690219 Sensitive lineage4.2.2.2 None
ERR8774546 Sensitive lineage2.2.1 None
ERR2228975 Sensitive lineage4.8 dk
ERR2228966 Sensitive lineage4.8 None
ERR9806993 Pre-XDR-TB lineage4.3.3 None
ERR4810910 Sensitive lineage4.2.2 cn
DRR474214 Sensitive lineage4.9 None
SRR13180348 Other La1.2.BCG None
ERR11044174 Sensitive lineage4.8 None
ERR4815180 Other La1.2.BCG gb
SRR22251395 HR-TB lineage1.1.1 None
ERR4822030 Other La1.2.BCG None
ERR2228881 Sensitive lineage4.8 dk
ERR9786357 Sensitive lineage4.8 None
ERR2229001 Sensitive lineage4.8 dk
ERR10680101 MDR-TB lineage3 None
ERR11050229 Sensitive lineage4.1.1.1 None
ERR766248 Other La1.2.BCG None
SRR5341289 Other lineage3 in
SRR9593172 Other La1.2.BCG None
ERR2228924 Sensitive lineage4.8 dk
ERR4821547 Other La1.2.BCG None
SRR5341226 Sensitive lineage2.2.1 in
SRR28860125 Sensitive lineage2.2.2 None
SRR28409549 Other La1.2.BCG None
SRR28393909 MDR-TB lineage4.3.3 None
SRR28393909 MDR-TB lineage4.3.3 None
SRR27069390 MDR-TB lineage2.2.1 None
SRR28046229 Other La1.2.BCG None
SRR28170804 Other La1.2.BCG None
SRR28409508 Other La1.2.BCG None
SRR28045606 Sensitive lineage4.9 None
SRR27069369 MDR-TB lineage2.2.1 None
SRR28389857 Sensitive lineage4.3.4.2 None
SRR28045103 Other La1.2.BCG None
SRR28409558 Other La1.2.BCG None
ERR2510305 MDR-TB lineage2.2.1.1 pk
ERR4820842 Other La1.2.BCG gb
ERR4817421 Other La1.2.BCG gb
ERR3256278 MDR-TB lineage1.2.1.2.1 ph
ERR8975835 Sensitive lineage4.4.1.1 None
SRR25207380 Pre-XDR-TB lineage2.2.1 None
SRR13399339 Other La1.2.BCG None
ERR766268 Other La1.2.BCG None
SRR21708938 Sensitive lineage2.2.1 None
ERR2229498 Sensitive lineage4.8 dk
SRR24222984 Other La1.2.BCG None
SRR7516405 Pre-XDR-TB lineage2.2.1 None
SRR10232121 Other La1.2.BCG None
ERR9807006 Pre-XDR-TB lineage4.3.4.2.1 None
DRR130149 RR-TB lineage2.2.1 None
SRR8668953 Other La1.2.BCG None
ERR11067742 Other La1.2.BCG None
SRR8648475 Other La1.2.BCG None
ERR4822040 Other La1.2.BCG None
SRR18912543 Other La1.2.BCG None
SRR21689776 Other La1.2.BCG None
SRR27449966 Other La1.2.BCG None
ERR766215 Other La1.2.BCG None
ERR4820278 Other La1.2.BCG None
SRR20969716 HR-TB lineage2.2.1 None
ERR4363286 Other La1.2.BCG None
SRR10379919 Other La1.2.BCG None
SRR12882672 HR-TB lineage1.1.2 None
SRR10251193 Other La3 None
SRR9596068 Other La1.2.BCG None
ERR2228963 Sensitive lineage4.8 dk
SRR15014773 MDR-TB lineage1.1.2 None
SRR27450250 Other La1.2.BCG None
SRR12142356 Pre-XDR-TB lineage2.2.1 None
ERR1950078 Sensitive lineage4.8 dk
SRR13938830 Other La1.8.1 None
SRR15316612 Sensitive lineage2.2.1 None
SRR27450271 Other La1.2.BCG None
ERR2228931 Sensitive lineage4.8 dk
SRR16058186 Other La1.2.BCG None
ERR4821992 MDR-TB lineage1.1.2 gb
ERR552592 Sensitive lineage4.3.3 cg
SRR9176616 Sensitive lineage3 None
ERR2229066 Sensitive lineage4.8 dk
SRR1049971 Sensitive lineage4.1 None
ERR2229008 Sensitive lineage4.8 dk
ERR4818297 Other La1.2.BCG gb
ERR4821464 Other La1.2.BCG None
SRR17657985 MDR-TB lineage2.2.1 None
ERR2229463 Sensitive lineage4.8 dk
SRR3647356 Other La1.2.BCG;La1.8.1;lineage4 None
ERR2229602 Sensitive lineage4.8 None
ERR766214 Other La1.2.BCG None
ERR1950034 Sensitive lineage4.8 dk
ERR4818509 RR-TB La1.2.BCG gb