Rv3696c - c.571_572dupGG
Drug resistance types
96 Sensitive
2 RR-TB
22 HR-TB
24 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 8 |
| lineage4.8 | 33 |
| lineage2.2.1 | 20 |
| La1.2.BCG | 26 |
| lineage4.3.4.2.1 | 2 |
| La1.8.2 | 1 |
| La1.7.1 | 10 |
| lineage1.2.1.2 | 3 |
| lineage4.3.3 | 11 |
| lineage3 | 14 |
| lineage2.2.2 | 2 |
| lineage4.1.1.1 | 1 |
| lineage2.1 | 2 |
| lineage1.2.1.2.1 | 3 |
| La1.8.1 | 6 |
| lineage1.1.1 | 3 |
| lineage1.1.3.1 | 4 |
| lineage1.1.2 | 1 |
| La1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage6.1.1 | 5 |
| lineage2.2.1.1 | 8 |
| lineage2.2.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage1.1.3.3 | 3 |
| lineage4.5 | 1 |
| lineage1.2.2.2 | 3 |
| lineage4.3.4.1 | 1 |
| lineage4.2.2 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.7 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 188 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR22424885 | HR-TB | lineage4.1.2.1 | None | ERR2228981 | Sensitive | lineage4.8 | None | ERR2229222 | Sensitive | lineage4.8 | dk | SRR22424818 | MDR-TB | lineage2.2.1 | None | ERR13291693 | Sensitive | lineage4.1.2.1 | None | SRR13399339 | Other | La1.2.BCG | None | ERR212083 | Sensitive | lineage4.3.4.2.1 | mw | ERR4769569 | Other | La1.8.2 | None | SRR11662340 | MDR-TB | lineage2.2.1 | None | SRR1915489 | HR-TB | La1.2.BCG | None | ERR2851361 | Other | La1.7.1 | lb | SRR21689633 | Sensitive | lineage4.1.2.1 | None | ERR3256178 | MDR-TB | lineage1.2.1.2 | ph | ERR550776 | Sensitive | lineage4.1.2.1 | de | ERR2707232 | RR-TB | lineage4.3.3 | cd | SRR28393633 | MDR-TB | lineage2.2.1 | None | SRR21690761 | Sensitive | lineage3 | None | ERR2516311 | Other | La1.2.BCG | be | ERR2229267 | Sensitive | lineage4.8 | dk | SRR12142356 | Pre-XDR-TB | lineage2.2.1 | None | SRR22250088 | Sensitive | lineage3 | None | ERR1949960 | Sensitive | lineage4.8 | dk | SRR11662410 | HR-TB | lineage2.2.2 | None | ERR2513516 | Sensitive | lineage2.2.1 | gb | SRR21733086 | HR-TB | lineage2.2.1 | None | SRR2024910 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024910 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1915488 | Other | La1.2.BCG | None | ERR11049414 | Sensitive | lineage4.1.1.1 | None | DRR474158 | Sensitive | lineage2.1 | None | SRR6152911 | HR-TB | lineage1.2.1.2.1 | ca | ERR6358748 | Sensitive | lineage4.3.3 | None | ERR11081868 | Sensitive | lineage4.8 | None | SRR18911455 | HR-TB | La1.2.BCG | None | SRR29231790 | MDR-TB | lineage4.3.3 | None | SRR7236401 | Other | La1.8.1 | None | ERR2228853 | Sensitive | lineage4.8 | dk | SRR11662532 | MDR-TB | lineage1.1.1 | None | SRR21711109 | Sensitive | lineage1.1.3.1 | None | ERR3273138 | MDR-TB | lineage4.3.3 | None | SRR29342488 | Sensitive | lineage4.3.3 | None | SRR5216726 | Other | La1.8.1 | None | ERR2512462 | Sensitive | lineage3 | gb | SRR21732896 | Sensitive | lineage1.1.2 | None | ERR12115304 | MDR-TB | lineage1.1.3.1 | None | ERR10680101 | MDR-TB | lineage3 | None | ERR1949961 | Sensitive | lineage4.8 | dk | ERR2229797 | Sensitive | lineage4.8 | dk | SRR29273898 | Other | lineage4.8 | None | ERR2517443 | Other | La1.7.1 | nl | SRR18911229 | Other | La1.2.BCG | None | ERR2229740 | Sensitive | lineage4.8 | dk | ERR6338299 | Other | La1.2 | None | SRR29230961 | Sensitive | lineage3.1.2 | None | SRR1165263 | MDR-TB | lineage2.2.2 | None | ERR552276 | Sensitive | lineage1.1.1.1 | None | ERR2229218 | Sensitive | lineage4.8 | dk | SRR25515029 | Sensitive | lineage2.2.1 | None | SRR23862096 | Sensitive | lineage2.2.1 | None | ERR4822249 | Sensitive | lineage4.8 | gb | ERR2229348 | Sensitive | lineage4.8 | dk | ERR2514118 | Sensitive | lineage4.6.2.2 | gb | SRR12142344 | MDR-TB | lineage2.2.1 | None | ERR031479 | Sensitive | lineage6.1.1 | None | SRR28409319 | Sensitive | lineage4.1.2.1 | None | ERR2510870 | Pre-XDR-TB | lineage2.2.1.1 | pk | ERR4831644 | MDR-TB | lineage2.2.1 | vn | ERR1949958 | Sensitive | lineage4.8 | dk | ERR2229770 | Sensitive | lineage4.8 | dk | ERR4800245 | MDR-TB | lineage2.2.1.1 | None | ERR3470564 | Sensitive | lineage4.1.2.1 | None | SRR21576588 | MDR-TB | lineage2.2.1.2 | None | ERR3275346 | Other | La1.7.1 | nl | ERR11049331 | HR-TB | La1.2.BCG | None | SRR12634574 | Sensitive | lineage4.6.1.1 | None | SRR28045563 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10482953 | Other | La1.8.1 | None | SRR21676411 | Sensitive | lineage2.2.1 | None | SRR22424757 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4822569 | Sensitive | lineage4.8 | tm | ERR2516501 | MDR-TB | lineage2.2.1 | pe | ERR4798485 | Sensitive | lineage3 | in | ERR4799231 | HR-TB | lineage2.2.1.1 | in | ERR2704681 | Sensitive | lineage6.1.1 | gm | ERR2229285 | Sensitive | lineage4.8 | dk | ERR2228963 | Sensitive | lineage4.8 | dk | ERR4820965 | HR-TB | La1.2.BCG | gb | SRR21689592 | Sensitive | lineage3.1.2.1 | None | ERR766223 | HR-TB | La1.2.BCG | None | ERR2815536 | Other | La1.7.X-unk4 | None | ERR2229783 | Sensitive | lineage4.8 | dk | ERR11044416 | Sensitive | lineage4.8 | None | ERR3276056 | Sensitive | lineage3 | nl | ERR11044420 | Sensitive | lineage4.8 | None | SRR22250102 | Sensitive | lineage3 | None | ERR2229270 | Sensitive | lineage4.8 | dk | SRR28558432 | Sensitive | lineage4.1.2.1 | None | SRR21691022 | Sensitive | lineage1.1.3.3 | None | SRR28858660 | Sensitive | lineage4.5 | None | ERR11068196 | Sensitive | lineage3 | None | ERR2229790 | Sensitive | lineage4.8 | dk | ERR1140767 | Sensitive | lineage6.1.1 | None | ERR1950082 | Sensitive | lineage4.8 | dk | SRR28044564 | Sensitive | lineage1.1.3.3 | None | ERR766264 | Other | La1.2.BCG | None | ERR1815540 | Other | La1.7.1 | None | SAMEA2534536 | Sensitive | lineage1.1.1.1 | None | ERR2229013 | Sensitive | lineage4.8 | dk | ERR11044379 | HR-TB | La1.2.BCG | None | ERR4797650 | Sensitive | lineage2.2.1.1 | in | ERR3439288 | Other | La1.8.1 | None | ERR2229058 | Sensitive | lineage4.8 | dk | SRR27450623 | Other | La1.2.BCG | None | ERR4819213 | Sensitive | lineage1.2.2.2 | gb | SRR29053416 | Sensitive | lineage1.1.1 | None | ERR12311986 | Sensitive | lineage4.3.4.1 | None | SRR25827869 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR9286004 | Other | La1.2.BCG | None | ERR4829548 | HR-TB | La1.2.BCG | it | SRR28858568 | Other | lineage1.2.1.2 | None | ERR4810910 | Sensitive | lineage4.2.2 | cn | SRR19325560 | Sensitive | lineage1.1.1 | None | ERR2199946 | Sensitive | lineage1.2.2.1 | sz | ERR4811454 | Sensitive | lineage3 | None | ERR7361975 | Pre-XDR-TB | lineage4.3.3 | None | ERR6397210 | Sensitive | lineage3 | None | ERR4816052 | Other | La1.2.BCG | None | SRR28026762 | Sensitive | lineage3 | None | ERR11049787 | HR-TB | La1.2.BCG | None | ERR502921 | MDR-TB | lineage2.2.1 | None | SRR29093992 | Other | La1.7.1 | None | ERR766247 | HR-TB | La1.2.BCG | None | SRR10321144 | Other | La1.2.BCG | None | ERR1140786 | Sensitive | lineage6.1.1 | None | SRR21689506 | Other | La1.7.1 | None | SRR24083654 | Other | lineage1.2.1.2.1 | None | SRR29053045 | Sensitive | lineage1.1.3.1 | None | ERR4800352 | MDR-TB | lineage2.2.1.1 | in | ERR2228836 | Sensitive | lineage4.8 | None | ERR2228856 | Sensitive | lineage4.8 | dk | ERR11067460 | Other | La1.7.1 | None | SRR7974377 | MDR-TB | lineage1.2.2.2 | None | ERR387001 | Other | La1.2.BCG | None | ERR4829455 | HR-TB | La1.2.BCG | it | ERR11049026 | HR-TB | La1.2.BCG | None | ERR13258518 | MDR-TB | lineage2.1 | None | SRR13180287 | Other | La1.2.BCG | None | SRR20969599 | Sensitive | lineage4.4.2 | None | ERR473288 | Sensitive | lineage4.3.4.2.1 | None | SRR13180234 | HR-TB | La1.2.BCG | None | ERR3468715 | Other | La1.8.1 | None | ERR4831861 | MDR-TB | lineage2.2.1 | vn | SRR29231654 | RR-TB | lineage4.3.3 | None | ERR11044218 | Sensitive | lineage4.3.3 | None | SRR29053035 | Sensitive | lineage2.2.1 | None | ERR2179836 | Sensitive | lineage3 | None | ERR3256177 | MDR-TB | lineage1.2.1.2 | ph | SRR6832676 | HR-TB | lineage4.7 | None | ERR13292272 | HR-TB | La1.2.BCG | None | ERR2229513 | Sensitive | lineage4.8 | None | SRR29055696 | MDR-TB | lineage4.8.1 | None | SRR28389857 | Sensitive | lineage4.3.4.2 | None | ERR3132244 | Sensitive | lineage4.3.3 | None | SRR18391646 | Other | La1.7.1 | None | SRR7070190 | Sensitive | lineage4.6.2.2 | None | ERR2707156 | MDR-TB | lineage4.3.3 | cd | ERR4822429 | Sensitive | lineage4.8 | None | ERR234254 | Sensitive | lineage6.1.1 | gm | ERR9786977 | Sensitive | lineage4.8 | None | SRR19303904 | Sensitive | lineage4.1.2.1 | None | ERR11049910 | Sensitive | lineage3 | None | ERR11081620 | Sensitive | lineage3 | None | SRR28858729 | HR-TB | La1.2.BCG | None | ERR1023245 | Other | lineage6.1.3 | None | SRR22424820 | MDR-TB | lineage2.2.1 | None | SRR14001966 | Other | La1.7.1 | None | ERR11465396 | Sensitive | lineage1.2.2.2 | None | SRR21732119 | Sensitive | lineage4.3.3 | None | SRR14782268 | Other | La1.2.BCG | None | SRR20969716 | HR-TB | lineage2.2.1 | None | ERR3276009 | Sensitive | lineage1.1.3.3 | nl | ERR2446363 | Other | La1.7.1 | nl | ERR2228940 | Sensitive | lineage4.8 | dk | ERR2228851 | Sensitive | lineage4.8 | dk | SRR7617564 | Other | La1.8.1 | None | SRR19303794 | HR-TB | lineage1.2.1.2.1 | None | SRR21676421 | Sensitive | lineage1.1.3.1 | None | ERR3275196 | Other | lineage2.2.1 | nl |
|---|
