Rv3696c - c.572delG
Drug resistance types
96 Sensitive
5 RR-TB
5 HR-TB
52 MDR-TB
23 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 73 |
| lineage4.1.1.3 | 8 |
| La1.8.1 | 4 |
| lineage2.1 | 7 |
| lineage4.1.2.1;lineage4.3.3 | 1 |
| lineage6.1.3 | 12 |
| lineage2.2.1.1 | 6 |
| lineage4.3.4.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.2.2.1 | 1 |
| lineage6.1.2 | 7 |
| lineage6.3.2 | 2 |
| lineage2.2.2 | 3 |
| lineage1.1.1.1 | 4 |
| lineage1.2.1.2.1 | 5 |
| lineage4.1.2.1 | 5 |
| lineage4.3.2.1 | 2 |
| lineage3 | 7 |
| lineage4.8 | 9 |
| lineage4.3.3 | 7 |
| lineage4.9 | 5 |
| lineage4.3.2 | 4 |
| lineage3.1 | 1 |
| lineage4.4.1 | 2 |
| lineage4.1.1 | 3 |
| lineage3.1.1 | 1 |
| lineage6.3.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.6.5 | 2 |
| lineage6.2.3 | 2 |
| lineage1.2.2.2 | 2 |
| lineage6.3.1 | 5 |
| lineage6.2.2 | 1 |
| lineage1.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.7 | 1 |
| lineage6.1.1 | 1 |
| lineage1.1.2;lineage3 | 1 |
| lineage4.5 | 1 |
| lineage4.4.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage5.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 206 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11662589 | MDR-TB | lineage2.2.1 | None | ERR4812711 | Sensitive | lineage4.1.1.3 | pe | SRR21279372 | Sensitive | lineage2.2.1 | None | SRR3091250 | Other | La1.8.1 | None | SRR11662572 | MDR-TB | lineage2.1 | None | ERR4810998 | Pre-XDR-TB | lineage2.2.1 | cn | SRR28393367 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | None | ERR234261 | Other | lineage6.1.3 | gm | ERR13289016 | RR-TB | lineage2.2.1.1 | None | SRR29126202 | Sensitive | lineage4.3.4.2 | None | SRR25515376 | Sensitive | lineage2.2.1 | None | SRR14088388 | MDR-TB | lineage3.1.3 | None | SRR8600012 | Other | La1.8.1 | None | ERR11050503 | Sensitive | lineage4.2.2.1 | None | SRR18715179 | Pre-XDR-TB | lineage2.2.1 | None | ERR9787124 | Sensitive | lineage6.1.2 | None | SRR6824452 | MDR-TB | lineage2.2.1 | cn | SRR26399749 | MDR-TB | lineage2.2.1 | None | ERR9119744 | MDR-TB | lineage4.1.1.3 | None | ERR9787091 | Sensitive | lineage6.3.2 | None | SRR10305775 | Sensitive | lineage2.2.2 | None | SRR26399827 | Sensitive | lineage2.2.1 | None | SRR22251399 | Sensitive | lineage1.1.1.1 | None | ERR2516846 | Pre-XDR-TB | lineage2.2.1.1 | gb | SRR5067301 | Other | lineage2.2.1 | vn | SRR28860046 | Sensitive | lineage1.2.1.2.1 | None | SRR29094472 | Sensitive | lineage4.1.2.1 | None | SRR12142345 | MDR-TB | lineage2.2.1 | None | ERR7737764 | MDR-TB | lineage4.3.2.1 | None | SRR10147691 | MDR-TB | lineage3 | None | ERR9119718 | Pre-XDR-TB | lineage2.2.1 | None | SRR5065471 | Sensitive | lineage2.2.1 | vn | ERR4830389 | Sensitive | lineage2.2.1 | vn | SRR21733029 | Sensitive | lineage1.1.1.1 | None | ERR3801612 | Other | lineage6.1.3 | None | ERR4457879 | Sensitive | lineage4.1.1.3 | None | SRR11662710 | MDR-TB | lineage2.2.1 | None | ERR3256162 | Other | lineage1.2.1.2.1 | ph | ERR4830383 | Sensitive | lineage2.2.1 | vn | ERR4829653 | Sensitive | lineage4.1.2.1 | it | SRR25206942 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206904 | MDR-TB | lineage2.2.1.1 | None | ERR4828624 | Sensitive | lineage2.2.1 | vn | ERR2515177 | Sensitive | lineage4.8 | None | SRR10851667 | Sensitive | lineage4.3.3 | None | ERR3806849 | Other | lineage6.1.3 | None | SRR29231869 | HR-TB | lineage4.9 | None | ERR4831947 | MDR-TB | lineage2.2.1 | vn | ERR1193703 | Sensitive | lineage4.3.2 | pe | ERR1140762 | Sensitive | lineage3.1 | None | ERR9119393 | Sensitive | lineage2.2.1 | None | SRR6480335 | Sensitive | lineage4.4.1 | None | SRR10809073 | Sensitive | lineage2.1 | None | SRR26399186 | Sensitive | lineage2.2.1 | None | SRR20969756 | MDR-TB | lineage2.2.1 | None | SRR11662188 | MDR-TB | lineage2.2.1 | None | ERR3256200 | Sensitive | lineage1.2.1.2.1 | ph | DRR473830 | Sensitive | lineage2.2.1 | None | ERR2516960 | MDR-TB | lineage2.2.1 | gb | SRR29230778 | Sensitive | lineage4.9 | None | ERR9119315 | Sensitive | lineage2.2.1 | None | SRR6856096 | Sensitive | lineage4.8 | None | ERR1465836 | Sensitive | lineage4.8 | None | ERR7361934 | Sensitive | lineage2.2.1 | None | SRR21662747 | Sensitive | lineage1.2.1.2.1 | None | ERR7911520 | MDR-TB | lineage2.2.1.1 | vn | ERR4011938 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9787136 | Sensitive | lineage6.1.2 | None | ERR4799254 | Sensitive | lineage3 | in | ERR4829077 | RR-TB | lineage4.1.1 | it | SRR12882415 | Sensitive | lineage3.1.1 | None | ERR1023285 | Sensitive | lineage6.3.3 | None | ERR4814354 | Sensitive | lineage4.8 | gb | ERR4809296 | MDR-TB | lineage4.8 | za | ERR4818505 | Sensitive | lineage3.1.2.1 | gb | SRR13583352 | MDR-TB | lineage4.3.2 | None | SRR6832379 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR11774863 | Sensitive | lineage2.2.1 | None | SRR26399522 | Other | lineage2.2.1 | None | ERR9787224 | Sensitive | lineage6.1.2 | None | SRR6458406 | Pre-XDR-TB | lineage2.2.1 | None | SRR8600075 | Other | La1.8.1 | None | SRR29772800 | Pre-XDR-TB | lineage3 | None | ERR13285163 | MDR-TB | lineage4.6.5 | None | SRR28741117 | MDR-TB | lineage2.1 | None | ERR234252 | Sensitive | lineage2.1 | us | ERR3803788 | Sensitive | lineage6.3.2 | None | ERR551085 | Sensitive | lineage4.8 | de | ERR9787344 | Other | lineage6.1.3 | None | SRR11828980 | MDR-TB | lineage2.1 | None | SRR28860003 | Sensitive | lineage4.8 | None | SRR25534321 | Sensitive | lineage2.2.1 | None | ERR1023262 | Sensitive | lineage6.2.3 | None | SRR26399389 | Sensitive | lineage2.2.1 | None | SRR12199413 | Sensitive | lineage1.2.2.2 | None | SRR28394037 | Pre-XDR-TB | lineage4.1.1 | None | ERR031475 | Sensitive | lineage2.1 | None | ERR11044576 | MDR-TB | lineage2.2.1 | None | SRR29050700 | MDR-TB | lineage4.3.2 | None | ERR5917734 | MDR-TB | lineage4.3.3 | by | SRR20969593 | Sensitive | lineage2.2.1.1 | None | ERR9787296 | Other | lineage6.1.3 | None | SRR26399251 | Sensitive | lineage2.2.1 | None | SRR25534346 | HR-TB | lineage2.2.1 | None | SRR25515238 | Sensitive | lineage2.2.1 | None | SRR23691439 | Other | lineage2.2.1 | None | ERR9787036 | Other | lineage6.3.1 | None | ERR2707146 | MDR-TB | lineage4.3.3 | cd | SRR25515285 | Other | lineage2.2.1 | None | SRR25207160 | MDR-TB | lineage2.2.1 | None | ERR9787258 | Other | lineage6.1.3 | None | ERR6879043 | Pre-XDR-TB | lineage2.2.1 | None | ERR553105 | MDR-TB | lineage4.1.1.3 | sz | SRR16088198 | MDR-TB | lineage2.2.1 | None | ERR3803772 | Other | lineage6.3.1 | None | ERR4810641 | MDR-TB | lineage2.2.1 | cn | DRR261195 | Sensitive | lineage1.1.1.1 | None | ERR6397176 | MDR-TB | lineage4.1.2.1 | None | ERR4457876 | Sensitive | lineage4.1.1.3 | None | ERR4192357 | Sensitive | lineage6.2.3 | None | ERR4192382 | Sensitive | lineage6.2.2 | None | ERR2707027 | Sensitive | lineage4.9 | cd | ERR7737733 | MDR-TB | lineage4.3.2.1 | None | SRR7068965 | MDR-TB | lineage2.2.1 | None | SRR25207217 | Pre-XDR-TB | lineage2.2.1 | None | SRR29051031 | MDR-TB | lineage4.3.2 | None | SRR5338521 | MDR-TB | lineage1.2.1.2.1 | None | ERR553362 | Sensitive | lineage2.2.1 | de | ERR7911512 | Pre-XDR-TB | lineage2.2.1 | vn | SRR26399807 | Sensitive | lineage2.2.1 | None | ERR4831441 | Pre-XDR-TB | lineage3 | None | ERR6361993 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662578 | MDR-TB | lineage2.2.1 | None | ERR9787102 | Other | lineage6.1.3 | None | SRR1144790 | Pre-XDR-TB | lineage2.2.2 | None | SRR25534478 | Sensitive | lineage2.2.1.1 | None | SRR12420540 | RR-TB | lineage2.2.1 | None | SRR8237404 | Sensitive | lineage2.2.1 | None | SRR5065647 | Sensitive | lineage2.2.1 | vn | SRR25534327 | Sensitive | lineage2.2.1 | None | ERR9787259 | Other | lineage6.1.3 | None | ERR4827735 | MDR-TB | lineage2.2.1 | None | ERR4830278 | Sensitive | lineage2.2.1 | vn | SRR29126322 | Sensitive | lineage4.1.2.1 | None | ERR9787375 | Other | lineage6.1.3 | None | SRR28393256 | RR-TB | lineage4.1.1.3 | None | ERR552023 | HR-TB | lineage6.3.1 | None | ERR2510414 | Pre-XDR-TB | lineage4.9 | pk | SRR7070453 | Sensitive | lineage4.8 | None | SRR29772428 | MDR-TB | lineage1.2.2 | None | SRR21733119 | Sensitive | lineage1.2.1.2 | None | SRR29017102 | MDR-TB | lineage1.2.2.2 | None | SRR6832476 | Sensitive | lineage4.7 | None | SRR25534514 | Sensitive | lineage2.2.1 | None | ERR11081255 | MDR-TB | lineage4.6.5 | None | SRR28119797 | Other | lineage2.2.1 | None | ERR3801365 | Sensitive | lineage6.1.2 | None | ERR1034787 | Pre-XDR-TB | lineage2.2.1 | pe | SRR25534146 | Sensitive | lineage2.2.1 | None | ERR13260643 | Pre-XDR-TB | lineage4.1.1 | None | SRR26399996 | Sensitive | lineage2.2.1 | None | ERR9787300 | Sensitive | lineage6.1.1 | None | SRR10808964 | Sensitive | lineage4.4.1 | None | SRR6964556 | RR-TB | lineage1.1.2;lineage3 | None | SRR29231317 | MDR-TB | lineage4.3.3 | None | ERR2512781 | Sensitive | lineage3 | gb | SRR11662247 | MDR-TB | lineage2.2.1 | None | ERR4817216 | Sensitive | lineage4.3.3 | gb | ERR4830773 | MDR-TB | lineage3 | ir | ERR9787139 | Other | lineage6.3.1 | None | SRR5073862 | Sensitive | lineage2.2.1 | vn | SRR6982033 | Sensitive | lineage2.2.1 | None | ERR1023286 | Sensitive | lineage6.3.1 | None | SRR29056159 | MDR-TB | lineage4.3.3 | None | ERR4811116 | Sensitive | lineage4.5 | cn | SRR25515091 | Sensitive | lineage2.2.1 | None | ERR2512429 | Sensitive | lineage4.8 | gb | SRR21277345 | HR-TB | lineage4.4.2 | None | ERR4810954 | MDR-TB | lineage2.2.1 | cn | ERR3806633 | Other | lineage6.1.3 | None | SRR19428512 | Sensitive | lineage3 | None | SRR5065524 | MDR-TB | lineage2.2.1 | vn | ERR4830932 | Pre-XDR-TB | lineage2.2.1 | np | ERR3799576 | Sensitive | lineage6.1.2 | None | SRR1723555 | MDR-TB | lineage2.2.1 | cn | ERR2707054 | HR-TB | lineage4.9 | cd | ERR4827592 | MDR-TB | lineage2.2.1 | None | ERR3287856 | Pre-XDR-TB | lineage2.2.1 | pe | ERR9787114 | Sensitive | lineage6.1.2 | None | ERR9119400 | Sensitive | lineage2.2.1 | None | ERR6397198 | Sensitive | lineage4.3.3 | None | ERR2179710 | Sensitive | lineage4.4.2 | cn | ERR4812951 | MDR-TB | lineage4.3.4.1 | pe | SAMN02398711 | Pre-XDR-TB | lineage2.2.2 | kr | SRR5709822 | MDR-TB | lineage2.1 | th | ERR4192370 | Sensitive | lineage5.1.1 | None | SRR21711107 | Sensitive | lineage4.1.2.1 | None | ERR4811304 | Pre-XDR-TB | lineage2.2.1 | cn | ERR031484 | Other | lineage6.1.3 | None | SRR26399516 | Sensitive | lineage1.1.1.1 | None | ERR3799547 | Other | lineage6.1.3 | None | ERR3468494 | Other | La1.8.1 | None | SRR9971269 | MDR-TB | lineage2.2.1 | None | ERR6362393 | MDR-TB | lineage4.1.1.3 | None | ERR3804035 | Sensitive | lineage6.1.2 | None | SRR25534283 | Sensitive | lineage2.2.1 | None |
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