lineage | Count |
---|---|
lineage4.3.3 | 2 |
lineage3 | 23 |
lineage4.5 | 3 |
lineage4.3.4.2 | 2 |
3 | |
lineage2.2.1.1 | 2 |
lineage1.2.2.2 | 5 |
lineage1.1.3.1 | 2 |
lineage1.1.3 | 1 |
lineage4.3.4.2.1 | 4 |
lineage4.1.2 | 2 |
lineage3.1.1 | 3 |
lineage1.1.3.2 | 1 |
La1.8.1 | 1 |
lineage2.2.1 | 7 |
lineage4.9.1 | 1 |
lineage4.1.2.1 | 3 |
lineage4.8 | 4 |
lineage4.2.2.2 | 2 |
lineage4.6.4 | 1 |
lineage1.1.2 | 8 |
lineage3.1.3 | 1 |
lineage4.3 | 1 |
lineage1.2.1.1 | 1 |
lineage4.9 | 2 |
lineage4.6.3 | 2 |
lineage4.4.1.2 | 1 |
lineage6.3.1 | 1 |
lineage1.2.1.2.1 | 2 |
lineage4.6.2.2 | 2 |
lineage4 | 1 |
lineage3.1.2.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.8.2 | 1 |
lineage4.1.1.3.1 | 2 |
lineage4.6.1.2 | 1 |
lineage4;lineage2.2.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4.6 | 1 |
lineage4;lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 104 |
ID | Drug resistance | Lineage | Country iso2 | SRR2100829 | HR-TB | lineage4.3.3 | None | SRR6650361 | Sensitive | lineage3 | None | SRR6650379 | Sensitive | lineage4.5 | None | SRR6650168 | Sensitive | lineage4.3.4.2 | None | SRR6650127 | Sensitive | None | SRR6650257 | Sensitive | lineage2.2.1.1 | None | SRR6650428 | Sensitive | lineage1.2.2.2 | None | SRR6650368 | Sensitive | lineage1.2.2.2 | None | SRR6650198 | Other | lineage3 | None | SRR6650210 | Sensitive | lineage1.1.3.1 | None | SRR6650161 | Other | lineage1.1.3 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR6650302 | Sensitive | lineage3 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR1750907 | RR-TB | None | SRR6650227 | Sensitive | lineage1.1.3.1 | None | SRR6650321 | Sensitive | lineage1.2.2.2 | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR176517 | Sensitive | lineage1.1.3.2 | None | ERR192076 | Other | La1.8.1 | None | ERR216956 | Sensitive | lineage2.2.1 | None | ERR216928 | Other | lineage4.9.1 | None | ERR228102 | Sensitive | lineage4.1.2.1 | None | ERR216957 | HR-TB | lineage4.3.4.2.1 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR228289 | Other | lineage3 | None | ERR228243 | Other | lineage4.8 | None | ERR230103 | Sensitive | lineage4.2.2.2 | None | ERR230064 | Sensitive | lineage4.6.4 | None | ERR230023 | Sensitive | lineage1.1.2 | None | ERR230049 | Sensitive | lineage3.1.3 | None | ERR230079 | Sensitive | lineage2.2.1 | None | ERR4819794 | Sensitive | lineage4.8 | None | ERR270621 | Other | lineage3 | None | ERR278580 | Sensitive | lineage4.3 | None | ERR270648 | Sensitive | lineage1.2.1.1 | None | ERR270727 | HR-TB | lineage3 | None | ERR270647 | Sensitive | lineage3 | None | ERR270738 | MDR-TB | lineage3 | None | ERR270644 | Sensitive | lineage1.1.2 | None | ERR270652 | Sensitive | lineage4.9 | None | ERR270658 | Sensitive | lineage1.1.2 | None | ERR270667 | HR-TB | lineage1.1.2 | None | ERR270674 | HR-TB | lineage1.2.2.2 | None | ERR270672 | HR-TB | lineage4.1.2.1 | None | ERR270689 | HR-TB | lineage4.5 | None | ERR270676 | Sensitive | lineage1.1.2 | None | ERR270776 | HR-TB | lineage1.1.2 | None | ERR270769 | MDR-TB | lineage2.2.1 | None | ERR266537 | Other | lineage3 | None | ERR270779 | HR-TB | lineage3 | None | ERR266522 | Sensitive | lineage4.6.3 | None | ERR270784 | MDR-TB | lineage3.1.1 | None | ERR270788 | HR-TB | lineage4.4.1.2 | None | ERR270793 | HR-TB | lineage3 | None | ERR270805 | HR-TB | lineage6.3.1 | None | ERR270715 | Other | lineage1.2.1.2.1 | None | ERR278533 | MDR-TB | lineage1.2.2.2 | None | ERR270702 | HR-TB | lineage4.6.2.2 | None | ERR279534 | Other | lineage4.1.2 | None | ERR270719 | HR-TB | lineage4.3.3 | None | ERR279513 | Sensitive | lineage3 | None | ERR323095 | Sensitive | lineage4.3.4.2.1 | None | ERR023249 | Sensitive | lineage3 | None | ERR026471 | HR-TB | lineage4 | None | ERR072015 | Sensitive | lineage4.9 | None | ERR072069 | Sensitive | lineage3 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR1007898 | HR-TB | lineage3 | None | ERR072092 | Sensitive | lineage3 | None | ERR108167 | Sensitive | lineage4.3.2.1 | None | ERR117652 | HR-TB | lineage1.2.1.2.1 | None | ERR114447 | Sensitive | lineage4.8.2 | None | ERR386864 | Sensitive | lineage4.1.1.3.1 | None | ERR144568 | Pre-XDR-TB | None | ERR330678 | Sensitive | lineage4.1.1.3.1 | None | ERR123926 | HR-TB | lineage4.6.1.2 | None | ERR387003 | Sensitive | lineage1.1.2 | None | ERR403281 | Pre-XDR-TB | lineage2.2.1 | None | ERR387057 | Sensitive | lineage3.1.1 | None | ERR387058 | Sensitive | lineage3 | None | ERR403221 | MDR-TB | lineage2.2.1 | None | ERR403259 | MDR-TB | lineage4;lineage2.2.1 | None | ERR387008 | Sensitive | lineage1.1.1.1 | None | ERR387060 | Sensitive | lineage3 | None | ERR403343 | Other | lineage3 | None | ERR403294 | Sensitive | lineage4.8 | None | ERR403312 | Sensitive | lineage4.5 | None | ERR403330 | Sensitive | lineage4.8 | None | ERR403295 | MDR-TB | lineage2.2.1 | None | ERR403367 | Other | lineage3 | None | ERR403376 | Sensitive | lineage3 | None | ERR403368 | Sensitive | lineage4.6.3 | None | ERR403371 | Sensitive | lineage1.1.2 | None | ERR403382 | Sensitive | lineage4.3.4.2 | None | ERR403396 | Other | lineage3 | None | ERR403390 | Sensitive | lineage2.2.1.1 | None | ERR403397 | Sensitive | lineage3 | None | ERR403400 | Sensitive | lineage4.6.2.2 | None | ERR403414 | HR-TB | lineage4.2.2.2 | None | ERR403417 | Sensitive | lineage4.1.2.1 | None | SRR18213751 | Sensitive | lineage4.6 | None | SRR1049660 | HR-TB | lineage2.2.1 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None |
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