Rv3794 - c.-305A>G
Drug resistance types
89 Sensitive
5 RR-TB
100 HR-TB
8 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| 131 | |
| lineage4.8 | 69 |
| lineage4 | 41 |
| La1.2 | 1 |
| lineage2 | 1 |
| lineage4.8;lineage4.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1.1 | 2 |
| lineage2.2.1 | 4 |
| lineage3.1 | 1 |
| lineage2.2 | 2 |
| lineage4.5 | 1 |
| lineage4.1 | 2 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.9 | 3 |
| lineage4.1.1.2 | 1 |
| lineage3 | 1 |
| lineage4.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 268 |
Geographic prevalence
Country level data for this variant is available for 20 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797016 | HR-TB | None | ERR3797044 | Other | None | ERR3797069 | Other | None | ERR3797083 | HR-TB | None | ERR4195451 | Sensitive | lineage4.8 | None | ERR4024991 | Other | None | ERR4188350 | HR-TB | None | ERR387051 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4195840 | Sensitive | lineage4.8 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4195835 | Sensitive | lineage4.8 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4797264 | Sensitive | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4811105 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811142 | MDR-TB | None | ERR5979524 | Sensitive | lineage4.8 | None | ERR5979499 | Sensitive | lineage4.8 | None | ERR5336148 | Other | None | ERR6866022 | Other | None | ERR5979532 | Sensitive | lineage4.8 | None | ERR6358979 | Other | None | ERR5979538 | Sensitive | lineage4.8;lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR6866410 | Sensitive | None | ERR736835 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR11049948 | Sensitive | lineage4.8 | None | ERR751326 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736867 | HR-TB | None | ERR736848 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR8976043 | HR-TB | None | ERR11049973 | Sensitive | lineage4.8 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9121444 | Sensitive | lineage4.8 | None | ERR9117709 | HR-TB | None | ERR9121423 | Sensitive | lineage4.8 | None | SRR1169194 | Other | None | ERR9125727 | Sensitive | lineage4.8 | None | ERR9787197 | Other | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1166100 | RR-TB | lineage4.8 | ro | SRR1167384 | Other | lineage4 | None | ERR9121438 | Sensitive | lineage4.8 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172951 | Other | None | SRR1172817 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1180996 | HR-TB | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1175074 | MDR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1196494 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184380 | HR-TB | None | SRR13180202 | Sensitive | lineage4.8 | None | SRR1196546 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR15316122 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR16058016 | Sensitive | lineage4.8 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18337409 | Sensitive | lineage4.8 | None | SRR18337410 | Sensitive | lineage4.8 | None | SRR19303801 | Sensitive | lineage4.8 | None | SRR19303884 | HR-TB | None | SRR19303811 | Sensitive | lineage4.8 | None | SRR19304036 | HR-TB | None | SRR19303880 | Sensitive | lineage4.8 | None | SRR22048552 | Sensitive | lineage4.8 | None | SRR19304102 | Sensitive | lineage4.8 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR21736958 | Sensitive | lineage4.8 | None | SRR22048372 | Sensitive | lineage4.8 | None | ERR11068662 | Sensitive | lineage4.8 | None | ERR11067715 | Sensitive | lineage4.8 | None | ERR11069038 | Sensitive | lineage4.8 | None | ERR11081270 | RR-TB | lineage4.8 | None | ERR11082977 | Sensitive | lineage4.8 | None | ERR11081518 | RR-TB | lineage4.8 | None | ERR1465875 | MDR-TB | lineage4.8 | None | ERR4815169 | Other | lineage4.8 | gb | SRR3675464 | HR-TB | lineage4.1 | None | ERR4815604 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675465 | HR-TB | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3544721 | Sensitive | lineage4.8 | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | ERR181744 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675234 | Other | None | SRR3675270 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675501 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675311 | Other | None | SRR3675387 | Sensitive | None | ERR212033 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675510 | Other | None | ERR11049224 | Sensitive | lineage4.8 | None | SRR3675545 | HR-TB | None | ERR212034 | HR-TB | None | ERR4816736 | Other | lineage4.8 | gb | ERR4816289 | Other | lineage4.8 | gb | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR3742665 | HR-TB | None | ERR4817892 | Sensitive | lineage4.8 | gb | ERR2512970 | Other | lineage4.8 | gb | ERR4816758 | Other | lineage4.8 | gb | ERR4818252 | Other | lineage4.1.1.2 | None | ERR234659 | HR-TB | None | ERR2510768 | Other | lineage4.8 | it | ERR2446566 | Other | lineage4.1 | None | ERR4818180 | Other | lineage4.8 | gb | ERR4818912 | Other | lineage4.8 | gb | SRR5341453 | Sensitive | None | ERR4818394 | Other | lineage4.9 | None | ERR4818615 | Other | None | SRR5341387 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR11049310 | Sensitive | lineage4.8 | None | ERR4819643 | Sensitive | lineage4.8 | gb | ERR4819442 | Other | lineage4.8 | gb | ERR4819729 | Sensitive | lineage4.8 | gb | SRR5341293 | HR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR2514767 | Sensitive | lineage4.8 | None | ERR4819865 | Sensitive | lineage4.8 | None | SRR5341303 | RR-TB | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341302 | HR-TB | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820964 | Sensitive | lineage4.8 | gb | SRR5341333 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693257 | Other | None | SRR5341469 | Other | lineage4 | None | ERR2693231 | Other | None | SRR6045453 | Sensitive | lineage4.8 | gb | ERR2693239 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045526 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045892 | Sensitive | None | ERR4821356 | Sensitive | lineage4.8 | None | ERR4821478 | Other | lineage4.8 | gb | SRR6045555 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6046046 | Other | None | ERR4830353 | Other | None | ERR4828814 | Sensitive | lineage4.8 | None | SRR6046225 | HR-TB | None | ERR2199958 | Sensitive | lineage4.8 | de | SRR6046514 | HR-TB | None | SRR6325444 | HR-TB | None | ERR4829713 | Pre-XDR-TB | lineage4.8 | it | ERR4828936 | Sensitive | lineage4.8 | it | ERR4829856 | Other | lineage4.8 | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6832271 | Sensitive | lineage4.8 | None | SRR6511621 | HR-TB | None | ERR11067402 | Sensitive | lineage4.8 | None | SRR6325447 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR323036 | HR-TB | None | ERR4831363 | Sensitive | lineage4.8 | de | ERR294266 | HR-TB | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None | ERR5311099 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR5311090 | HR-TB | None | SRR7131068 | Other | lineage4.8 | None | SRR7131036 | Sensitive | lineage4.8 | None | ERR5311081 | HR-TB | None | SRR7496509 | Other | None | SRR9738508 | RR-TB | lineage4.8 | None | ERR323107 | Other | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323038 | HR-TB | None | ERR323043 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323053 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR11043580 | Sensitive | lineage4.8 | None | ERR1063896 | Sensitive | None | ERR10969245 | Sensitive | lineage4.8 | None | ERR11043222 | Sensitive | lineage4.8 | None | ERR11044879 | Sensitive | lineage4.8 | None | ERR11043599 | Sensitive | lineage4.8 | None | ERR133825 | Sensitive | lineage4 | None | ERR11049163 | Sensitive | lineage4.8 | None | ERR323115 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3468544 | HR-TB | None |
|---|
