Rv3794 - c.-31delC
Drug resistance types
1 Sensitive
0 RR-TB
0 HR-TB
23 MDR-TB
32 Pre-XDR-TB
6 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1 | 38 |
| lineage4.5 | 1 |
| lineage3 | 5 |
| lineage4.2.1.1 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.3.4.2 | 7 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 62 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13870427 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9119819 | MDR-TB | lineage4.1.1.3 | None | ERR789236 | XDR-TB | lineage2.2.1 | None | SRR21747027 | Pre-XDR-TB | lineage2.2.1 | None | ERR3256132 | MDR-TB | lineage4.5 | ph | ERR2510506 | MDR-TB | lineage3 | pk | ERR2510517 | Pre-XDR-TB | lineage3 | pk | SRR29539035 | MDR-TB | lineage4.2.1.1 | None | ERR8025621 | Pre-XDR-TB | lineage2.2.1 | None | SRR6964649 | MDR-TB | lineage3 | None | ERR978256 | XDR-TB | lineage2.2.1 | None | SRR25389418 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796555 | Pre-XDR-TB | lineage3 | in | ERR9806969 | Pre-XDR-TB | lineage2.2.1 | None | ERR8773611 | MDR-TB | lineage2.2.1 | None | ERR789235 | XDR-TB | lineage2.2.1 | None | ERR9907747 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4797228 | Pre-XDR-TB | lineage2.2.1 | in | SRR7517690 | XDR-TB | lineage2.2.1 | None | ERR978257 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358868 | MDR-TB | lineage4.6.1.1 | None | SRR21686600 | MDR-TB | lineage4.3.4.2 | None | DRR130241 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829321 | Sensitive | lineage3 | None | ERR4813630 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2706989 | MDR-TB | lineage4.3.4.2 | cd | SRR28706563 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706474 | Pre-XDR-TB | lineage2.2.1 | None | SRR28339289 | Pre-XDR-TB | lineage2.2.1 | None | SRR28339290 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707209 | MDR-TB | lineage4.3.4.2 | cd | ERR789237 | Pre-XDR-TB | lineage2.2.1 | None | SRR16115035 | MDR-TB | lineage4.3.4.2 | None | ERR2515173 | MDR-TB | lineage2.2.1 | za | SRR12142356 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707162 | MDR-TB | lineage4.3.4.2 | cd | SRR17658004 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358869 | MDR-TB | lineage4.6.1.1 | None | ERR2516843 | MDR-TB | lineage2.2.1 | gb | ERR4896321 | Pre-XDR-TB | lineage2.2.1 | None | SRR5709754 | Pre-XDR-TB | lineage2.2.1 | th | ERR5987244 | MDR-TB | lineage4.1.1.3 | None | SRR25827527 | Pre-XDR-TB | lineage2.2.1;lineage4.2.2.2 | None | ERR3132179 | Pre-XDR-TB | lineage2.2.1 | None | ERR789234 | XDR-TB | lineage2.2.1 | None | SRR21576713 | MDR-TB | lineage4.4.2 | None | SRR25827858 | MDR-TB | lineage4.3.3 | None | ERR789238 | XDR-TB | lineage2.2.1 | None | ERR789239 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824428 | MDR-TB | lineage2.2.1 | cn | SRR25389417 | Pre-XDR-TB | lineage2.2.1 | None | SRR17657952 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827719 | MDR-TB | lineage2.2.1 | None | DRR130113 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515589 | Pre-XDR-TB | lineage2.2.1 | za | ERR4822358 | Pre-XDR-TB | lineage2.2.1 | None | ERR3132175 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797166 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR18912066 | MDR-TB | lineage4.3.4.2 | None | ERR8773609 | MDR-TB | lineage2.2.1 | None | SRR12420476 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515871 | MDR-TB | lineage2.2.1 | None |
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