lineage | Count |
---|---|
40 | |
lineage4 | 1 |
La1 | 1 |
lineage3.1.3 | 2 |
lineage4.9 | 2 |
lineage3.1 | 1 |
lineage1.2.2.1 | 3 |
La1.8.2 | 3 |
lineage4.8 | 1 |
lineage1.2.1.2.1 | 1 |
La2 | 1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR736839 | Other | None | ERR3797044 | Other | None | ERR702404 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR9125309 | HR-TB | lineage3.1.3 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1172951 | Other | None | SRR1173400 | Other | None | SRR1173778 | Other | None | SRR12882286 | Sensitive | lineage1.2.2.1 | None | SRR15296930 | Other | La1.8.2 | None | SRR16058287 | HR-TB | lineage3.1.3 | None | SRR15296931 | Other | La1.8.2 | None | SRR15296935 | Other | La1.8.2 | None | SRR3675510 | Other | None | ERR4815604 | HR-TB | None | ERR4816656 | HR-TB | None | ERR2229021 | Sensitive | lineage4.8 | None | SRR3675572 | Other | None | SRR3742665 | HR-TB | None | ERR4816708 | Sensitive | lineage1.2.1.2.1 | None | ERR234659 | HR-TB | None | ERR2693254 | Other | None | ERR2693231 | Other | None | ERR4818929 | HR-TB | None | SRR5341418 | Other | None | ERR2693230 | Other | None | ERR2660456 | Sensitive | lineage1.2.2.1 | None | SRR6046362 | HR-TB | None | SRR6046482 | HR-TB | None | ERR502532 | HR-TB | None | ERR133986 | HR-TB | None | ERR2693257 | Other | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | SRR8217918 | HR-TB | None | ERR4818886 | Sensitive | lineage1.2.2.1 | gb |
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