Rv3794 - c.1143C>G
Drug resistance types
160 Sensitive
1 RR-TB
9 HR-TB
20 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 2 |
| lineage2.2.2 | 2 |
| lineage2.2.1.2 | 1 |
| lineage2.2.1 | 14 |
| lineage4.8.2 | 7 |
| lineage4.4.1.1 | 3 |
| lineage7 | 18 |
| lineage4.2.2.2 | 3 |
| lineage4.6.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3 | 16 |
| lineage4.3.3 | 3 |
| lineage4.8 | 6 |
| lineage4.6.1 | 1 |
| lineage1.2.2.2 | 3 |
| lineage1.1.3.2 | 21 |
| lineage4.9.1 | 10 |
| lineage3.1.1 | 30 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2.1 | 31 |
| lineage4.3.4.2 | 2 |
| lineage1.1.2 | 11 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2 | 2 |
| lineage1.2.2.1 | 2 |
| lineage4.9 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.7 | 1 |
| lineage4.3.2.1 | 1 |
| La1.3 | 1 |
| lineage4.6.3 | 1 |
| lineage4.3.2;lineage4.1.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.6.1.2 | 4 |
| 2 | |
| lineage4.1.1 | 3 |
| lineage4.8.1 | 2 |
| lineage4.1.1.3.1 | 3 |
| lineage4.6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 221 |
Geographic prevalence
Country level data for this variant is available for 187 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1792506 | Other | La1.8.1 | None | SRR125286 | HR-TB | lineage2.2.2 | None | SRR125305 | Sensitive | lineage2.2.1.2 | None | SRR125308 | Sensitive | lineage2.2.1 | None | SRR18213914 | Sensitive | lineage4.8.2 | None | SRR21279350 | Sensitive | lineage2.2.1 | None | SRR2469368 | Sensitive | lineage4.4.1.1 | None | ERR233355 | Sensitive | lineage7 | None | ERR1200620 | MDR-TB | lineage4.2.2.2 | et | ERR233346 | Sensitive | lineage7 | None | ERR1199034 | Sensitive | lineage4.6.1.1 | ug | ERR233363 | Sensitive | lineage1.1.1 | None | ERR1200618 | Sensitive | lineage7 | None | ERR233361 | Sensitive | lineage2.2.1.1 | None | ERR1200603 | Sensitive | lineage7 | None | ERR1200609 | Sensitive | lineage3 | et | ERR1193641 | Sensitive | lineage4.3.3 | et | ERR233369 | Other | lineage4.8 | et | ERR1200637 | Sensitive | lineage4.2.2.2 | et | ERR1199039 | Sensitive | lineage4.6.1 | None | ERR1200631 | Sensitive | lineage7 | et | ERR1200613 | Sensitive | lineage7 | et | ERR1200612 | Sensitive | lineage7 | et | ERR234138 | Sensitive | lineage2.2.1 | cn | ERR233364 | Other | lineage1.2.2.2 | cn | ERR234139 | Sensitive | lineage2.2.1 | None | ERR245651 | MDR-TB | lineage1.2.2.2 | mw | ERR245656 | Sensitive | lineage1.1.3.2 | mw | ERR245650 | Sensitive | lineage4.9.1 | mw | ERR245646 | Sensitive | lineage3.1.1 | mw | ERR245653 | Sensitive | lineage4.9.1 | mw | ERR1200605 | Other | lineage4.2.1 | et | ERR245649 | Other | lineage4.8 | mw | ERR245647 | Sensitive | lineage1.1.3.2 | mw | ERR245655 | Sensitive | lineage2.2.1 | mw | ERR245648 | Other | lineage1.1.3.2 | mw | ERR245652 | Sensitive | lineage1.1.3.2 | mw | ERR245667 | Sensitive | lineage4.3.4.2.1 | mw | ERR245658 | Sensitive | lineage4.9.1 | mw | ERR245657 | Sensitive | lineage1.1.3.2 | mw | ERR245659 | Other | lineage4.9.1 | mw | ERR245663 | Other | lineage2.2.1 | mw | ERR245661 | Sensitive | lineage4.3.4.2.1 | mw | ERR245671 | Sensitive | lineage3.1.1 | mw | ERR245668 | Sensitive | lineage3.1.1 | mw | ERR245669 | Other | lineage3 | mw | ERR245673 | Sensitive | lineage4.3.4.2.1 | mw | ERR245666 | Sensitive | lineage4.3.4.2 | mw | ERR245682 | Other | lineage3 | mw | ERR245676 | Sensitive | lineage3.1.1 | mw | ERR245678 | Other | lineage3 | mw | ERR245675 | Sensitive | lineage1.1.2 | None | ERR245674 | Sensitive | lineage1.1.3.2 | mw | ERR245670 | MDR-TB | lineage1.2.2.2 | mw | ERR245681 | Sensitive | lineage4.3.4.2.1 | mw | ERR245679 | Sensitive | lineage1.1.3.2 | mw | ERR245677 | Sensitive | lineage1.1.3.2 | mw | ERR245688 | Sensitive | lineage3.1.1 | mw | ERR245684 | Sensitive | lineage3.1.1 | mw | ERR245683 | Sensitive | lineage4.3.4.2.1 | mw | ERR245687 | Sensitive | lineage3.1.1 | mw | ERR245695 | Sensitive | lineage1.1.3.2 | mw | ERR245690 | Sensitive | lineage4.3.4.1 | mw | ERR245692 | Sensitive | lineage2.2.1 | mw | ERR245691 | Sensitive | lineage1.1.2 | mw | ERR245689 | Sensitive | lineage3.1.1 | mw | ERR245686 | Other | lineage4.3.4.2 | mw | ERR245693 | Sensitive | lineage4.3.4.2.1 | mw | ERR245700 | Sensitive | lineage4.3.4.2.1 | mw | ERR245697 | Sensitive | lineage4.3.4.1 | mw | ERR245694 | Sensitive | lineage3.1.1 | mw | ERR245699 | Sensitive | lineage1.1.2 | mw | ERR245701 | Other | lineage4.8 | mw | ERR245702 | Sensitive | lineage3.1.1 | mw | ERR245711 | Other | lineage4.1.2 | mw | ERR245703 | Sensitive | lineage1.1.3.2 | mw | ERR245696 | Sensitive | lineage2.2.1 | mw | ERR245698 | Sensitive | lineage1.1.2 | mw | ERR245706 | Sensitive | lineage4.3.4.2.1 | mw | ERR245704 | Sensitive | lineage3.1.1 | mw | ERR245708 | Sensitive | lineage4.3.4.2.1 | mw | ERR245716 | Sensitive | lineage2.2.1 | None | ERR245714 | Sensitive | lineage4.9.1 | mw | ERR245707 | Sensitive | lineage4.3.4.2.1 | mw | ERR245713 | Sensitive | lineage3.1.1 | mw | ERR245715 | Sensitive | lineage3.1.1 | mw | ERR245712 | Sensitive | lineage4.9.1 | mw | ERR245717 | Sensitive | lineage1.1.3.2 | mw | ERR245726 | Sensitive | lineage3.1.1 | mw | ERR245724 | Sensitive | lineage4.3.4.2.1 | mw | ERR245719 | Sensitive | lineage4.9.1 | mw | ERR245718 | HR-TB | lineage4.3.4.2.1 | mw | ERR245722 | Other | lineage3 | mw | ERR245720 | Sensitive | lineage1.1.3.2 | mw | ERR245725 | HR-TB | lineage4.3.4.2.1 | mw | ERR245723 | Sensitive | lineage2.2.1 | mw | ERR245727 | Sensitive | lineage1.2.2.1 | mw | ERR245731 | Sensitive | lineage4.9.1 | mw | ERR245735 | Sensitive | lineage2.2.1 | mw | ERR245734 | Sensitive | lineage1.1.3.2 | mw | ERR245730 | Sensitive | lineage4.3.4.2.1 | mw | ERR245728 | Sensitive | lineage2.2.1 | mw | ERR245733 | HR-TB | lineage4.3.4.2.1 | mw | ERR245729 | Other | lineage4.3.4.2.1 | mw | ERR245736 | Sensitive | lineage4.9 | mw | ERR245732 | Sensitive | lineage3.1.1 | mw | ERR245738 | Sensitive | lineage4.3.4.2.1 | mw | ERR245737 | Sensitive | lineage4.3.4.2.1 | mw | ERR245740 | Sensitive | lineage4.1.2 | None | ERR245744 | Sensitive | lineage4.3.4.2.1 | mw | ERR245739 | Sensitive | lineage1.2.2.1 | mw | ERR245747 | MDR-TB | lineage3 | mw | ERR245750 | Sensitive | lineage4.3.4.2.1 | mw | ERR245749 | Sensitive | lineage4.3.4.2.1 | mw | ERR245760 | Sensitive | lineage1.1.3.2 | mw | ERR245759 | HR-TB | lineage4.1.2.1 | mw | ERR245743 | Sensitive | lineage4.7 | mw | ERR245758 | Other | lineage4.9.1 | None | ERR245766 | Sensitive | lineage3.1.1 | mw | ERR245762 | Sensitive | lineage4.3.2.1 | mw | ERR245755 | Sensitive | lineage4.3.4.2.1 | mw | ERR245763 | Sensitive | lineage1.1.3.2 | mw | ERR245772 | Sensitive | lineage4.9.1 | None | ERR245770 | Sensitive | lineage4.3.4.2.1 | mw | ERR245768 | Sensitive | lineage3.1.1 | mw | ERR245781 | Sensitive | lineage1.1.3.2 | mw | ERR245775 | Sensitive | lineage1.1.3.2 | mw | ERR245788 | Sensitive | lineage4.3.4.2.1 | mw | ERR245815 | Sensitive | lineage4.3.4.2.1 | None | ERR245819 | Other | lineage3.1.1 | None | ERR245817 | Sensitive | lineage1.1.3.2 | None | ERR245820 | Sensitive | lineage1.1.3.2 | None | ERR245822 | Other | lineage1.1.3.2 | None | ERR245839 | Sensitive | lineage3.1.1 | mw | ERR245826 | Sensitive | lineage4.3.4.2.1 | mw | ERR1200638 | Sensitive | lineage3 | et | ERR245721 | Sensitive | lineage1.1.3.2 | mw | ERR233359 | Sensitive | lineage2.2.2 | kr | ERR1200636 | Other | lineage7 | et | ERR1200635 | Sensitive | lineage7 | et | ERR233354 | Sensitive | lineage7 | None | ERR233358 | RR-TB | lineage4.1.2.1 | mx | ERR1200606 | Sensitive | lineage7 | et | ERR1200602 | Sensitive | lineage7 | et | ERR233360 | Sensitive | lineage3 | None | ERR1200615 | Sensitive | lineage4.8 | et | ERR233351 | Sensitive | lineage1.1.2 | et | ERR1200616 | Sensitive | lineage4.1.2.1 | et | ERR1200625 | Sensitive | lineage7 | et | ERR1200607 | HR-TB | lineage3 | et | ERR1200622 | Other | La1.3 | et | ERR233350 | MDR-TB | lineage4.2.2.2 | et | ERR1200610 | Sensitive | lineage7 | et | ERR1200627 | Sensitive | lineage4.3.3 | et | ERR1200623 | Sensitive | lineage7 | et | ERR233370 | Other | lineage2.2.1 | None | ERR1200611 | Other | lineage4.6.3 | et | ERR1200626 | Sensitive | lineage1.1.2 | et | ERR1200640 | Sensitive | lineage7 | et | ERR1200619 | Sensitive | lineage7 | et | ERR233357 | Other | lineage2.2.1 | None | ERR233347 | Sensitive | lineage3 | None | ERR025413 | Sensitive | lineage4.3.2;lineage4.1.2.1 | None | ERR040090 | Sensitive | lineage3.1.1 | gb | ERR040086 | Sensitive | lineage3.1.1 | gb | ERR040100 | Sensitive | lineage4.8.2 | gb | ERR040099 | Sensitive | lineage4.8.2 | gb | ERR040114 | Sensitive | lineage3.1.2.1 | ug | ERR040121 | MDR-TB | lineage1.1.2 | ug | ERR040118 | MDR-TB | lineage3 | ug | ERR040113 | Sensitive | lineage4.3.4.2.1 | ug | ERR040126 | MDR-TB | lineage3.1.1 | ug | ERR040133 | Sensitive | lineage3.1.1 | ug | ERR040122 | MDR-TB | lineage4.8 | ug | ERR040135 | MDR-TB | lineage4.6.1.2 | ug | ERR040129 | MDR-TB | lineage3 | ug | ERR040132 | MDR-TB | lineage4.3.3 | ug | ERR040131 | MDR-TB | lineage4.6.1.2 | ug | ERR040141 | MDR-TB | ug | ERR040140 | Pre-XDR-TB | lineage3 | ug | ERR046736 | Sensitive | lineage4.1.1 | gb | ERR046739 | Sensitive | lineage4.1.1 | gb | ERR046766 | Sensitive | lineage4.8.2 | gb | ERR046777 | HR-TB | lineage4.8.1 | gb | ERR046786 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046849 | Sensitive | lineage1.1.2 | gb | ERR046862 | Sensitive | lineage3 | gb | ERR046883 | Sensitive | lineage3 | gb | ERR046885 | Sensitive | lineage4.3.4.2.1 | gb | ERR046913 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046920 | Sensitive | lineage4.8.2 | gb | ERR1200621 | Sensitive | lineage4.6 | et | ERR1200633 | Sensitive | lineage7 | et | ERR040088 | Sensitive | lineage3.1.1 | gb | ERR040087 | Sensitive | lineage3.1.1 | gb | ERR040089 | Sensitive | lineage3.1.1 | gb | ERR040091 | Sensitive | lineage3.1.1 | gb | ERR040093 | Sensitive | lineage3.1.1 | gb | ERR040096 | Sensitive | lineage4.8.2 | gb | ERR040108 | Sensitive | lineage3.1.1 | gb | ERR040107 | Sensitive | lineage3.1.1 | gb | ERR040112 | Sensitive | lineage4.3.4.2.1 | ug | ERR040116 | Other | lineage4.3.4.2.1 | ug | ERR040127 | MDR-TB | lineage4.6.1.2 | ug | ERR040136 | MDR-TB | lineage3 | ug | ERR040125 | MDR-TB | lineage4.6.1.2 | ug | ERR040130 | MDR-TB | lineage4.4.1.1 | ug | ERR040134 | MDR-TB | lineage4.3.4.2.1 | ug | ERR046749 | Other | La1.8.1 | gb | ERR046778 | HR-TB | lineage4.8.1 | gb | ERR046820 | Sensitive | lineage4.8.2 | gb | ERR046835 | Sensitive | lineage4.4.1.1 | None | ERR046841 | Sensitive | lineage4.1.1 | gb | ERR046855 | MDR-TB | lineage1.1.2 | gb | ERR046873 | Sensitive | lineage4.1.2.1 | gb | ERR046875 | Sensitive | lineage4.1.2.1 | gb | ERR046896 | Sensitive | lineage1.1.2 | None | ERR046903 | Pre-XDR-TB | lineage4.8 | gb | ERR046907 | Sensitive | lineage1.1.2 | gb | ERR046917 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR1034634 | HR-TB | None |
|---|
