lineage | Count |
---|---|
lineage4.2.2.2 | 3 |
lineage2.2.1 | 8 |
lineage1.1.3.1 | 2 |
lineage4.3.4.2.1 | 2 |
lineage1.1.2 | 6 |
lineage1.2.1.2.1 | 1 |
lineage4.3.3 | 1 |
lineage3.1.2 | 1 |
lineage4.6.2.2 | 2 |
lineage5.1.1 | 2 |
lineage4.1.2.1;lineage4.8 | 1 |
lineage4.8 | 4 |
lineage4.1.1.3 | 2 |
lineage4.1.2 | 1 |
lineage4.1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 37 |
ID | Drug resistance | Lineage | Country iso2 | ERR7737937 | MDR-TB | lineage4.2.2.2 | None | SRR13232703 | Pre-XDR-TB | lineage2.2.1 | None | SRR3742656 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017136 | MDR-TB | lineage1.1.3.1 | None | ERR6359080 | MDR-TB | lineage4.3.4.2.1 | None | ERR4816564 | HR-TB | lineage1.1.2 | gb | ERR11775983 | MDR-TB | lineage1.2.1.2.1 | None | SRR29539774 | Pre-XDR-TB | lineage4.3.3 | None | SRR29289408 | MDR-TB | lineage3.1.2 | None | ERR11068809 | MDR-TB | lineage4.3.4.2.1 | None | ERR11049628 | HR-TB | lineage1.1.2 | None | ERR4423778 | MDR-TB | lineage4.6.2.2 | None | SRR29017672 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093311 | MDR-TB | lineage4.2.2.2 | None | ERR9895046 | Other | lineage5.1.1 | None | ERR4011969 | MDR-TB | lineage4.2.2.2 | None | ERR4553729 | MDR-TB | lineage2.2.1 | None | ERR11465112 | Other | lineage4.1.2.1;lineage4.8 | None | SRR671844 | Pre-XDR-TB | lineage2.2.1 | cn | SRR20969376 | Other | lineage2.2.1 | None | ERR11044947 | Other | lineage4.8 | None | SRR22250067 | HR-TB | lineage1.1.2 | None | ERR11049629 | HR-TB | lineage1.1.2 | None | SRR1368335 | Pre-XDR-TB | lineage2.2.1 | None | ERR3256128 | MDR-TB | lineage4.1.1.3 | ph | SRR22251452 | HR-TB | lineage1.1.2 | None | ERR894442 | Other | lineage4.8 | None | ERR4423777 | MDR-TB | lineage4.6.2.2 | None | ERR4553719 | MDR-TB | lineage1.1.3.1 | None | SRR1368336 | Pre-XDR-TB | lineage2.2.1 | None | ERR894441 | Other | lineage4.8 | None | ERR2653236 | Pre-XDR-TB | lineage4.1.2 | None | ERR894440 | Other | lineage4.8 | ma | SRR29440565 | HR-TB | lineage1.1.2 | None | ERR3256127 | MDR-TB | lineage4.1.1.3 | ph | ERR552273 | Pre-XDR-TB | lineage4.1.1.1 | sz | ERR3170488 | MDR-TB | lineage5.1.1 | gh |
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