lineage | Count |
---|---|
lineage4.6.3 | 2 |
lineage7 | 12 |
lineage1.1.1 | 1 |
lineage2.2.1.1 | 1 |
lineage3 | 6 |
La1.7.1 | 4 |
lineage6 | 2 |
La1.2.BCG | 1 |
lineage3.1.1 | 3 |
lineage2.2.2 | 1 |
lineage4 | 1 |
lineage4.1.2.1 | 3 |
lineage4.8 | 1 |
lineage1.1.1.1 | 1 |
1 | |
lineage2.2.1 | 1 |
lineage4.6.1.1 | 1 |
lineage4.1.1 | 2 |
lineage4.3.3 | 2 |
lineage4.3.4.2.1 | 2 |
lineage4.8.2 | 4 |
lineage4.1.1.3.1 | 4 |
La1.8.1 | 5 |
lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 62 |
ID | Drug resistance | Lineage | Country iso2 | ERR233348 | Sensitive | lineage4.6.3 | et | ERR233355 | Sensitive | lineage7 | None | ERR233363 | Sensitive | lineage1.1.1 | None | ERR1200618 | Sensitive | lineage7 | None | ERR233346 | Sensitive | lineage7 | None | ERR233361 | Sensitive | lineage2.2.1.1 | None | ERR1200603 | Sensitive | lineage7 | None | ERR1200639 | Sensitive | lineage7 | et | ERR1200609 | Sensitive | lineage3 | et | SRR4019491 | Other | La1.7.1 | None | ERR233368 | Sensitive | lineage6 | None | ERR234151 | Other | La1.2.BCG | None | ERR1200613 | Sensitive | lineage7 | et | ERR1200630 | Sensitive | lineage3.1.1 | et | ERR233359 | Sensitive | lineage2.2.2 | kr | ERR1200614 | Sensitive | lineage4.6.3 | et | ERR1200608 | Sensitive | lineage7 | et | ERR4818631 | RR-TB | lineage4 | None | ERR233358 | RR-TB | lineage4.1.2.1 | mx | ERR233360 | Sensitive | lineage3 | None | ERR1200606 | Sensitive | lineage7 | et | ERR1200602 | Sensitive | lineage7 | et | ERR1200615 | Sensitive | lineage4.8 | et | ERR233366 | Sensitive | lineage6 | None | ERR1200607 | HR-TB | lineage3 | et | ERR1200623 | Sensitive | lineage7 | et | ERR1200604 | Sensitive | lineage7 | et | ERR233365 | Sensitive | lineage1.1.1.1 | vn | SRR6046482 | HR-TB | None | ERR233370 | Other | lineage2.2.1 | None | ERR1200640 | Sensitive | lineage7 | et | ERR1199062 | Sensitive | lineage4.6.1.1 | ug | ERR233347 | Sensitive | lineage3 | None | ERR046736 | Sensitive | lineage4.1.1 | gb | SRR857283 | MDR-TB | lineage4.3.3 | None | SRR857294 | MDR-TB | lineage4.3.3 | None | ERR046732 | Sensitive | lineage4.3.4.2.1 | gb | ERR046773 | Sensitive | lineage3.1.1 | gb | ERR046745 | Sensitive | lineage4.1.1 | gb | ERR046751 | Sensitive | lineage4.8.2 | gb | ERR046767 | Sensitive | lineage4.8.2 | gb | ERR046766 | Sensitive | lineage4.8.2 | gb | ERR046782 | Sensitive | lineage4.1.1.3.1 | gb | ERR046783 | Sensitive | lineage4.1.1.3.1 | gb | ERR046774 | Other | La1.8.1 | None | ERR046798 | Sensitive | lineage4.1.1.3.1 | gb | ERR046791 | Sensitive | lineage4.1.1.3.1 | gb | ERR046801 | Sensitive | lineage3 | None | ERR046937 | Sensitive | lineage4.1.2.1 | gb | ERR046885 | Sensitive | lineage4.3.4.2.1 | gb | ERR046909 | Sensitive | lineage4.9 | None | ERR046872 | Sensitive | lineage4.1.2.1 | gb | ERR046866 | Sensitive | lineage3.1.1 | gb | ERR046877 | Sensitive | lineage4.8.2 | gb | SRR2100074 | Other | La1.8.1 | None | SRR1791780 | Other | La1.8.1 | None | SRR1792059 | Other | La1.8.1 | None | SRR1792486 | Other | La1.7.1 | None | SRR1792495 | Other | La1.7.1 | None | SRR1792499 | Other | La1.7.1 | None | SRR1792506 | Other | La1.8.1 | None | SRR2100075 | Sensitive | lineage3 | None |
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