lineage | Count |
---|---|
lineage4.3.3 | 4 |
lineage2.2.1 | 13 |
lineage4.1.2.1 | 9 |
lineage4.4.2 | 1 |
lineage1.2.1.2.1 | 4 |
lineage4.8 | 7 |
lineage4.1.3 | 1 |
lineage4.5 | 1 |
lineage4 | 1 |
lineage4.6.1.2 | 1 |
lineage4.4.1.1 | 1 |
lineage3.1.3 | 1 |
lineage4.1.2 | 3 |
lineage4.2.1 | 3 |
lineage3 | 4 |
lineage2.2.1.1 | 1 |
lineage1.1.2 | 2 |
lineage2.2.1.2 | 2 |
lineage4.9 | 1 |
lineage2.2.2 | 2 |
spoligotype | Count |
---|---|
None | 62 |
ID | Drug resistance | Lineage | Country iso2 | SRR14164395 | Sensitive | lineage4.3.3 | None | SRR13232508 | Pre-XDR-TB | lineage2.2.1 | None | SRR12931748 | Sensitive | lineage4.1.2.1 | None | SRR14519735 | Sensitive | lineage4.4.2 | None | SRR16058385 | Sensitive | lineage1.2.1.2.1 | None | SRR15904138 | MDR-TB | lineage2.2.1 | None | SRR16058052 | Sensitive | lineage1.2.1.2.1 | None | ERR11050667 | Sensitive | lineage4.3.3 | None | SRR16370458 | MDR-TB | lineage2.2.1 | None | ERR4822476 | Sensitive | lineage4.8 | de | SRR22536494 | MDR-TB | lineage4.1.2.1 | None | ERR11080843 | Sensitive | lineage4.1.3 | None | ERR11082572 | MDR-TB | lineage4.5 | None | ERR11082913 | MDR-TB | lineage4.8 | None | ERR11083139 | Sensitive | lineage4 | None | ERR11068995 | MDR-TB | lineage2.2.1 | None | ERR11080966 | MDR-TB | lineage4.6.1.2 | None | ERR11081148 | Sensitive | lineage4.1.2.1 | None | ERR11082770 | Sensitive | lineage4.4.1.1 | None | ERR11082854 | Sensitive | lineage3.1.3 | None | ERR11083150 | Other | lineage4.1.2 | None | ERR11083156 | Sensitive | lineage4.1.2.1 | None | ERR4831406 | Sensitive | lineage4.2.1 | de | ERR2486958 | Sensitive | lineage4.8 | None | ERR4829702 | HR-TB | lineage4.1.2.1 | it | ERR4827521 | HR-TB | lineage4.8 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4831293 | Sensitive | lineage4.1.2 | de | ERR4831195 | Other | lineage4.1.2 | de | ERR3794496 | MDR-TB | lineage2.2.1 | None | ERR3014622 | MDR-TB | lineage4.1.2.1 | tn | ERR11049108 | Sensitive | lineage2.2.1 | None | ERR11043899 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4831382 | Sensitive | lineage4.1.2.1 | de | ERR4872345 | MDR-TB | lineage2.2.1 | None | SRR7341701 | MDR-TB | lineage4.8 | ro | ERR10465782 | Sensitive | lineage4.2.1 | None | ERR11043457 | Sensitive | lineage4.3.3 | None | ERR11043880 | Sensitive | lineage3 | None | ERR11044439 | Sensitive | lineage2.2.1.1 | None | ERR3794377 | MDR-TB | lineage2.2.1 | None | ERR3794527 | MDR-TB | lineage2.2.1 | None | ERR3794508 | MDR-TB | lineage2.2.1 | None | ERR4797009 | Sensitive | lineage4.1.2.1 | in | ERR11049498 | Sensitive | lineage1.1.2 | None | ERR3794522 | MDR-TB | lineage2.2.1 | None | ERR4553974 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4798272 | Sensitive | lineage1.1.2 | in | ERR4797519 | Sensitive | lineage2.2.1.2 | in | ERR4797611 | Pre-XDR-TB | lineage2.2.1 | in | ERR5917742 | HR-TB | lineage4.8 | by | ERR5979455 | Sensitive | lineage3 | None | ERR5979802 | Sensitive | lineage4.9 | None | ERR9125278 | Sensitive | lineage1.2.1.2.1 | None | ERR7911137 | MDR-TB | lineage2.2.1 | vn | ERR7911211 | MDR-TB | lineage2.2.2 | za | ERR7911523 | Sensitive | lineage4.8 | za | ERR7911648 | MDR-TB | lineage2.2.2 | za | ERR7910899 | MDR-TB | lineage4.2.1 | md | ERR9286093 | Sensitive | lineage3 | None | ERR9286009 | Other | lineage3 | None | ERR9125335 | Sensitive | lineage1.2.1.2.1 | None |
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