lineage | Count |
---|---|
lineage4 | 2 |
1 | |
lineage4.3.4.2 | 3 |
La1.7 | 1 |
La1.8.1 | 4 |
La1.7.1 | 1 |
lineage4.1.2.1 | 9 |
lineage4.8 | 6 |
lineage3.1.1 | 1 |
lineage4.4.2 | 1 |
lineage4.4.1.1.1;lineage3.1.1 | 1 |
lineage4.1.1 | 5 |
lineage2.2.1 | 11 |
lineage3 | 7 |
lineage4.1 | 1 |
lineage1.1.3.1 | 6 |
lineage4;lineage1.2.2.1 | 1 |
lineage4.5 | 1 |
lineage4.4.1.2 | 1 |
lineage1.2.2.2 | 5 |
lineage1 | 1 |
lineage4.8;lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage6.2.3 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.1.1.3.1 | 1 |
lineage4.6.2.2 | 2 |
lineage4.2.1.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4.7 | 1 |
La3 | 1 |
lineage4.3.1.1 | 1 |
lineage4.3.3 | 4 |
lineage4.9 | 1 |
lineage4.2 | 1 |
lineage6.3.1 | 2 |
lineage4.1.2 | 2 |
lineage4.4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 92 |
ID | Drug resistance | Lineage | Country iso2 | SRR12199451 | Sensitive | lineage4 | None | SRR12199479 | Sensitive | None | SRR21658531 | Sensitive | lineage4.3.4.2 | None | SRR17156543 | Other | La1.7 | None | SRR1791753 | Other | La1.8.1 | None | SRR1791946 | Other | La1.7.1 | None | SRR20139551 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR20139562 | RR-TB | lineage4.8 | None | SRR13888747 | Other | La1.8.1 | None | SRR18213831 | Sensitive | lineage3.1.1 | None | SRR20139570 | HR-TB | lineage4.1.2.1 | None | SRR2101488 | Sensitive | lineage4.4.2 | None | SRR2101546 | Sensitive | lineage4.4.1.1.1;lineage3.1.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR22351863 | MDR-TB | lineage2.2.1 | None | SRR21675945 | Sensitive | lineage3 | None | SRR21727898 | Sensitive | lineage4.1.1 | None | ERR552159 | Sensitive | lineage4.1 | None | SRR6650243 | Sensitive | lineage4.1.1 | None | SRR6650220 | Other | lineage3 | None | SRR6650135 | Sensitive | lineage1.1.3.1 | None | SRR6650361 | Sensitive | lineage3 | None | SRR6650350 | Other | lineage3 | None | SRR6650394 | Sensitive | lineage3 | None | SRR6650390 | Sensitive | lineage4;lineage1.2.2.1 | None | SRR6650379 | Sensitive | lineage4.5 | None | SRR6797635 | Other | lineage2.2.1 | None | SRR6650117 | Sensitive | lineage4.4.1.2 | None | SRR6650175 | Sensitive | lineage1.2.2.2 | None | SRR6650149 | HR-TB | lineage4.8 | None | SRR6650182 | Sensitive | lineage1 | None | SRR6650319 | Sensitive | lineage1.1.3.1 | None | SRR6650345 | Other | lineage1.1.3.1 | None | SRR6650285 | Sensitive | lineage4.8 | None | SRR6650185 | HR-TB | lineage1.1.3.1 | None | SRR6650368 | Sensitive | lineage1.2.2.2 | None | SRR6650392 | Sensitive | lineage2.2.1 | None | SRR6650391 | Sensitive | lineage1.1.3.1 | None | ERR1750941 | Sensitive | lineage4.8;lineage4.1.2 | None | SRR6650210 | Sensitive | lineage1.1.3.1 | None | SRR6650399 | Sensitive | lineage4.1.2.1 | None | ERR1750926 | Other | lineage4.3.2.1 | za | SRR6650193 | Sensitive | lineage3 | None | SRR6650230 | MDR-TB | lineage2.2.1 | None | SRR6650321 | Sensitive | lineage1.2.2.2 | None | ERR4815975 | Sensitive | lineage4.1.2.1 | None | ERR2181458 | Sensitive | lineage6.2.3 | gh | SRR3675534 | Other | lineage4.3.4.2.1 | None | ERR2503404 | Sensitive | lineage4.1.2.1 | None | ERR2229482 | Sensitive | lineage4 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2503478 | Sensitive | lineage1.2.2.2 | fi | ERR4818578 | Other | lineage4.6.2.2 | None | ERR2512872 | Sensitive | lineage4.2.1.1 | None | ERR4819090 | HR-TB | lineage2.2.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR2513611 | Sensitive | lineage4.3.4.2 | None | ERR2514197 | RR-TB | lineage1.1.1.1 | None | ERR2514142 | HR-TB | lineage1.2.2.2 | None | ERR4821162 | Sensitive | lineage4.8 | None | ERR2653091 | MDR-TB | lineage4.7 | None | SRR20139565 | RR-TB | lineage4.1.2.1 | None | ERR2659155 | Sensitive | La3 | None | SRR20139569 | RR-TB | lineage4.1.2.1 | None | ERR4821171 | Sensitive | lineage4.3.1.1 | gb | SRR6257066 | MDR-TB | lineage4.3.3 | None | ERR4821968 | HR-TB | lineage2.2.1 | gb | SRR6257098 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257080 | MDR-TB | lineage4.8 | None | SRR9940977 | Other | lineage4.9 | None | ERR5165792 | Sensitive | lineage4.3.3 | None | SRR6257105 | MDR-TB | lineage2.2.1 | ru | ERR5165800 | Sensitive | lineage4.3.3 | None | SRR8600241 | Other | La1.8.1 | None | ERR8773497 | Sensitive | lineage4.8 | None | SRR8791314 | Pre-XDR-TB | lineage4.2 | None | ERR1193694 | Sensitive | lineage4.3.4.2 | it | ERR4407493 | Sensitive | lineage4.1.2.1 | None | ERR1274710 | HR-TB | lineage4.1.1 | None | ERR3803987 | Sensitive | lineage6.3.1 | None | ERR7162981 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786331 | Sensitive | lineage4.1.2.1 | None | ERR9786277 | Sensitive | lineage4.6.2.2 | None | ERR9892553 | Sensitive | lineage4.1.2 | None | ERR9787003 | Sensitive | lineage4.1.1 | None | ERR9787093 | Sensitive | lineage6.3.1 | None | SRR1002693 | MDR-TB | lineage4.3.3 | None | SRR11462868 | Other | La1.8.1 | None | SRR1187181 | HR-TB | lineage4.1.2 | ca | SRR11972297 | MDR-TB | lineage2.2.1 | None | SRR10272570 | Sensitive | lineage4.4.1.1 | None | SRR11972411 | MDR-TB | lineage2.2.1 | None |
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