lineage | Count |
---|---|
lineage4.2.2.2 | 1 |
lineage4.8 | 14 |
lineage2.2.1 | 21 |
lineage4.3.4.2 | 2 |
lineage4.4.1.1 | 4 |
lineage3 | 6 |
1 | |
lineage3.1.2.1 | 1 |
lineage4.3.3 | 7 |
lineage1.1.2 | 1 |
lineage1.2.2.2 | 3 |
lineage4.9 | 6 |
La1.2 | 2 |
lineage4.1.2.1 | 15 |
lineage1.2.1.2 | 1 |
lineage4.2.1 | 1 |
lineage4 | 2 |
lineage1.1.3.2 | 1 |
lineage4.3.4.1 | 2 |
lineage4.6.2.2 | 2 |
lineage4.7 | 1 |
lineage6.2 | 1 |
lineage4;lineage2.2.1 | 1 |
lineage4.1.1.3 | 2 |
lineage4.5 | 2 |
lineage4.2.2 | 1 |
lineage3.1.1 | 1 |
spoligotype | Count |
---|---|
None | 102 |
ID | Drug resistance | Lineage | Country iso2 | ERR11044581 | Sensitive | lineage4.2.2.2 | None | ERR11044785 | Sensitive | lineage4.8 | None | ERR11044831 | Other | lineage2.2.1 | None | ERR11044919 | MDR-TB | lineage2.2.1 | None | ERR4553405 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR3794432 | MDR-TB | lineage2.2.1 | None | ERR4020188 | MDR-TB | lineage4.4.1.1 | None | ERR3470568 | Sensitive | lineage3 | None | ERR11049481 | Sensitive | lineage4.8 | None | ERR4553772 | MDR-TB | None | ERR4553576 | MDR-TB | lineage2.2.1 | None | ERR4796605 | MDR-TB | lineage3.1.2.1 | in | ERR4553802 | MDR-TB | lineage2.2.1 | None | ERR4799228 | Pre-XDR-TB | lineage4.3.3 | in | ERR4796766 | Sensitive | lineage1.1.2 | in | ERR4800614 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800543 | MDR-TB | lineage1.2.2.2 | in | ERR4800597 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800705 | Other | lineage1.2.2.2 | None | ERR4800672 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049900 | Sensitive | lineage4.8 | None | ERR4800715 | MDR-TB | lineage2.2.1 | None | ERR4800713 | Sensitive | lineage1.2.2.2 | None | ERR5979614 | Sensitive | lineage4.9 | None | ERR5979743 | Sensitive | lineage4.9 | None | ERR6201848 | Other | La1.2 | None | ERR5979699 | Sensitive | lineage4.9 | None | ERR6201897 | Other | La1.2 | None | SRR13232484 | MDR-TB | lineage2.2.1 | None | SRR10380033 | Pre-XDR-TB | lineage2.2.1 | None | SRR10525334 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR10808984 | Sensitive | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR7910976 | MDR-TB | lineage2.2.1 | md | ERR9285894 | Sensitive | lineage2.2.1 | None | SRR10379928 | MDR-TB | lineage4.2.1 | None | SRR10809157 | Sensitive | lineage4 | None | SRR13232533 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232583 | MDR-TB | lineage2.2.1 | None | SRR13232538 | Sensitive | lineage2.2.1 | None | SRR14520112 | Sensitive | lineage4 | None | SRR14164392 | HR-TB | lineage4.4.1.1 | None | SRR14164658 | Sensitive | lineage1.1.3.2 | None | SRR14782071 | Sensitive | lineage4.8 | None | SRR14801547 | Sensitive | lineage4.3.4.1 | None | ERR11081806 | Sensitive | lineage4.9 | None | SRR21240151 | Sensitive | lineage4.3.3 | None | SRR22536476 | MDR-TB | lineage4.3.3 | None | ERR11081343 | Sensitive | lineage4.1.2.1 | None | SRR14801639 | MDR-TB | lineage2.2.1 | None | SRR14801942 | Sensitive | lineage4.3.4.1 | None | SRR18337411 | Sensitive | lineage4.1.2.1 | None | SRR19303901 | Sensitive | lineage4.8 | None | ERR11082414 | Sensitive | lineage4.3.4.2 | None | ERR11082001 | Sensitive | lineage4.4.1.1 | None | ERR11082349 | HR-TB | lineage4.6.2.2 | None | ERR11082377 | Pre-XDR-TB | lineage4.7 | None | ERR11082396 | Sensitive | lineage6.2 | None | ERR11082804 | Sensitive | lineage4.8 | None | SRR23861893 | RR-TB | lineage4.1.2.1 | None | ERR11083062 | Sensitive | lineage4.1.2.1 | None | ERR11082874 | MDR-TB | lineage2.2.1 | None | ERR7363031 | Sensitive | lineage4.4.1.1 | None | SRR23861911 | RR-TB | lineage4.8 | None | ERR7363121 | Sensitive | lineage4.3.3 | None | ERR7363085 | Sensitive | lineage4.1.2.1 | None | ERR2510792 | Sensitive | lineage4.9 | it | SRR5486906 | Pre-XDR-TB | lineage4.8 | None | ERR4827640 | HR-TB | lineage4.3.3 | None | ERR4822560 | Sensitive | lineage4;lineage2.2.1 | tm | ERR4822600 | XDR-TB | lineage4.3.3 | de | ERR4829200 | Other | lineage3 | None | ERR4828833 | RR-TB | lineage4.1.2.1 | None | ERR4829465 | Sensitive | lineage4.1.1.3 | it | ERR4829512 | Sensitive | lineage4.8 | it | ERR4828420 | Sensitive | lineage2.2.1 | None | ERR4829589 | Sensitive | lineage4.1.2.1 | it | ERR4828857 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4829786 | Sensitive | lineage3 | it | ERR4828898 | Sensitive | lineage4.1.2.1 | None | ERR4829764 | MDR-TB | lineage4.1.2.1 | it | ERR4828869 | RR-TB | lineage4.8 | None | ERR4831136 | Sensitive | lineage4.5 | de | ERR4829819 | Sensitive | lineage4.8 | it | SRR6485080 | HR-TB | lineage4.1.2.1 | None | SRR6484863 | Sensitive | lineage4.8 | None | ERR4828990 | RR-TB | lineage4.6.2.2 | None | SRR6325452 | Sensitive | lineage4.1.2.1 | us | ERR4831137 | Sensitive | lineage4.5 | de | ERR4831179 | Sensitive | lineage3 | de | ERR4972513 | MDR-TB | lineage4.3.3 | None | SRR7131264 | Other | lineage3 | None | SRR7131234 | Other | lineage4.9 | None | ERR4831322 | Sensitive | lineage4.1.2.1 | de | SRR7131147 | Other | lineage4.1.2.1 | None | ERR11043407 | Sensitive | lineage4.2.2 | None | ERR11049086 | Sensitive | lineage4.8 | None | SRR7516453 | Sensitive | lineage2.2.1 | None | SRR7585411 | MDR-TB | lineage3 | in | ERR11043874 | Sensitive | lineage3.1.1 | None | ERR11044182 | Sensitive | lineage4.8 | None | ERR11044354 | Sensitive | lineage4.1.1.3 | None |
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