lineage | Count |
---|---|
lineage2.2 | 1 |
lineage2.2.1 | 70 |
lineage2.2.1.1 | 2 |
lineage1.1.2 | 19 |
lineage3 | 5 |
lineage2.1 | 2 |
lineage4.1 | 1 |
lineage4.3.3 | 4 |
2 | |
lineage4.1.1 | 4 |
lineage4.1.3 | 2 |
lineage4.2.2.2 | 2 |
lineage4.2.1 | 2 |
lineage1.2.1.2.1 | 1 |
lineage4.3.4.1 | 1 |
lineage3.1.2 | 2 |
lineage1.2.2.2 | 1 |
lineage4.3.2.1;lineage2.2.1 | 2 |
spoligotype | Count |
---|---|
None | 123 |
ID | Drug resistance | Lineage | Country iso2 | SRR11972158 | MDR-TB | lineage2.2 | None | SRR11972427 | Pre-XDR-TB | lineage2.2.1 | None | SRR15600379 | MDR-TB | lineage2.2.1.1 | None | SRR13232618 | Pre-XDR-TB | lineage2.2.1 | None | SRR12199467 | HR-TB | lineage1.1.2 | None | SRR14088383 | Pre-XDR-TB | lineage3 | None | SRR15316317 | MDR-TB | lineage2.2.1 | None | SRR20632774 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969669 | Other | lineage2.2.1 | None | SRR21576688 | MDR-TB | lineage2.1 | None | SRR23938673 | MDR-TB | lineage2.2.1 | None | SRR21576700 | MDR-TB | lineage2.1 | None | SRR21747004 | MDR-TB | lineage2.2.1 | None | ERR11081053 | MDR-TB | lineage4.1 | None | SRR23938674 | MDR-TB | lineage2.2.1 | None | ERR11081606 | MDR-TB | lineage2.2.1 | None | ERR11081607 | MDR-TB | lineage2.2.1 | None | SAMEA2534696 | MDR-TB | lineage2.2.1 | uz | SRR1723804 | MDR-TB | lineage2.2.1 | cn | SRR3082094 | Pre-XDR-TB | lineage1.1.2 | None | SRR3082074 | MDR-TB | lineage1.1.2 | None | SRR3082075 | MDR-TB | lineage1.1.2 | None | SAMEA2534056 | MDR-TB | lineage2.2.1 | uz | SAMEA2534582 | MDR-TB | lineage2.2.1 | uz | SAMEA2533701 | MDR-TB | lineage2.2.1 | uz | SRR3085309 | MDR-TB | lineage1.1.2 | None | SRR3085312 | Pre-XDR-TB | lineage1.1.2 | None | SAMEA2535195 | MDR-TB | lineage2.2.1 | uz | SAMEA2533389 | Pre-XDR-TB | lineage2.2.1 | uz | SAMEA2533485 | MDR-TB | lineage2.2.1 | uz | SAMEA2534634 | MDR-TB | lineage2.2.1 | uz | SAMEA2534859 | MDR-TB | lineage2.2.1 | uz | SAMEA2534780 | MDR-TB | lineage2.2.1 | uz | SAMEA2534076 | MDR-TB | lineage2.2.1 | uz | ERR2515286 | Pre-XDR-TB | lineage4.3.3 | za | SRR5485552 | MDR-TB | None | SAMEA2534128 | MDR-TB | lineage2.2.1 | uz | ERR2677451 | MDR-TB | lineage2.2.1 | de | SAMEA2533463 | MDR-TB | lineage2.2.1 | uz | SAMEA2534699 | MDR-TB | lineage2.2.1 | uz | SAMEA2534091 | MDR-TB | lineage2.2.1 | uz | SAMN02628510 | Pre-XDR-TB | lineage2.2.1 | ir | SRR5152903 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2533932 | MDR-TB | lineage2.2.1 | uz | ERR2515995 | MDR-TB | lineage4.1.1 | za | ERR2516408 | MDR-TB | lineage4.3.3 | pe | SRR5817476 | Pre-XDR-TB | lineage1.1.2 | None | ERR2516835 | MDR-TB | lineage2.2.1 | gb | SRR5535684 | MDR-TB | lineage4.1.3 | None | SRR5818697 | MDR-TB | lineage1.1.2 | dj | SRR5817477 | Pre-XDR-TB | lineage1.1.2 | None | SRR5818576 | MDR-TB | lineage1.1.2 | dj | SRR5818695 | MDR-TB | lineage1.1.2 | dj | SRR5818575 | MDR-TB | lineage1.1.2 | dj | ERR4829954 | Pre-XDR-TB | lineage1.1.2 | None | ERR4829095 | Pre-XDR-TB | lineage1.1.2 | dj | ERR4830792 | MDR-TB | lineage4.2.2.2 | et | ERR4830808 | Pre-XDR-TB | lineage1.1.2 | et | ERR4830783 | Pre-XDR-TB | lineage1.1.2 | et | ERR4829167 | Pre-XDR-TB | lineage3 | pk | ERR4830841 | Pre-XDR-TB | lineage1.1.2 | et | ERR4830758 | Pre-XDR-TB | lineage2.2.1 | ir | ERR4831234 | MDR-TB | lineage2.2.1 | None | SAMEA2534012 | MDR-TB | lineage2.2.1 | uz | ERR4830945 | Pre-XDR-TB | lineage3 | np | ERR4830948 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832110 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832441 | MDR-TB | lineage2.2.1 | None | SRR6832533 | HR-TB | lineage4.3.3 | None | SRR6824459 | MDR-TB | lineage2.2.1 | cn | SAMEA2535218 | MDR-TB | lineage2.2.1 | uz | SRR6824452 | MDR-TB | lineage2.2.1 | cn | SRR6964546 | Pre-XDR-TB | lineage3 | None | SRR8374277 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831761 | MDR-TB | lineage2.2.1 | None | SRR7517808 | MDR-TB | lineage4.1.3 | None | SRR7585437 | Pre-XDR-TB | lineage2.2.1 | in | ERR11043427 | MDR-TB | lineage4.3.3 | None | SRR8651582 | Pre-XDR-TB | lineage2.2.1 | cn | ERR10680117 | MDR-TB | lineage2.2.1 | None | ERR10762387 | MDR-TB | lineage4.2.1 | None | ERR3256162 | Other | lineage1.2.1.2.1 | ph | ERR11043687 | MDR-TB | lineage2.2.1 | None | ERR11044759 | MDR-TB | lineage2.2.1 | None | ERR3256263 | MDR-TB | lineage4.3.4.1 | ph | ERR3273212 | MDR-TB | lineage2.2.1 | None | ERR3794379 | MDR-TB | lineage2.2.1 | None | ERR3794440 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794398 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794402 | MDR-TB | lineage2.2.1 | None | ERR3794441 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794388 | MDR-TB | lineage2.2.1 | None | ERR3794483 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794446 | MDR-TB | lineage2.2.1 | None | ERR3794468 | MDR-TB | lineage2.2.1 | None | ERR3794533 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794541 | MDR-TB | lineage2.2.1 | None | ERR3794535 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810991 | MDR-TB | lineage2.2.1 | cn | ERR4024988 | MDR-TB | lineage2.2.1 | None | ERR4553594 | MDR-TB | None | ERR4796890 | Pre-XDR-TB | lineage3 | in | ERR4810930 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4796863 | Pre-XDR-TB | lineage3.1.2 | in | ERR4797223 | Pre-XDR-TB | lineage3.1.2 | in | ERR4798194 | MDR-TB | lineage1.2.2.2 | in | ERR4798374 | MDR-TB | lineage1.1.2 | in | ERR4809254 | MDR-TB | lineage2.2.1.1 | za | ERR5864821 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864822 | Pre-XDR-TB | lineage2.2.1 | None | ERR5918112 | MDR-TB | lineage4.1.1 | za | ERR5864820 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864819 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865512 | MDR-TB | lineage2.2.1 | None | ERR6397180 | MDR-TB | lineage4.2.2.2 | None | ERR6866306 | MDR-TB | lineage4.1.1 | None | ERR7902773 | MDR-TB | lineage1.1.2 | None | ERR8975978 | MDR-TB | lineage4.1.1 | None | SRR10303343 | MDR-TB | lineage4.3.2.1;lineage2.2.1 | None | SRR10430396 | MDR-TB | lineage4.3.2.1;lineage2.2.1 | None | ERR7911060 | MDR-TB | lineage4.2.1 | md | SRR1173140 | Pre-XDR-TB | lineage2.2.1 | None | SRR1174309 | Pre-XDR-TB | lineage2.2.1 | None |
---|