lineage | Count |
---|---|
lineage1.1.2 | 2 |
lineage2.2.1 | 11 |
lineage4.3.2 | 3 |
lineage2.2.1.1 | 1 |
lineage3 | 5 |
lineage4.3.4.2 | 4 |
lineage4.3.3 | 15 |
lineage2.2.2 | 4 |
lineage4.1.1.1 | 2 |
lineage4.2.2.2 | 2 |
lineage2.2 | 1 |
lineage4.1.1 | 8 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | SRR15014638 | MDR-TB | lineage1.1.2 | None | SRR25207354 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085354 | MDR-TB | lineage4.3.2 | None | SRR1723689 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR1723811 | MDR-TB | lineage2.2.1 | cn | SRR3082119 | MDR-TB | lineage4.3.2 | None | SRR6044856 | MDR-TB | lineage3 | gb | SRR6824374 | MDR-TB | lineage2.2.1 | cn | SRR6045523 | MDR-TB | lineage3 | gb | ERR751463 | MDR-TB | lineage4.3.4.2 | pe | SAMEA2534166 | MDR-TB | lineage2.2.1 | uz | SRR6824307 | RR-TB | lineage2.2.1 | cn | ERR2515390 | MDR-TB | lineage4.3.3 | None | ERR1023398 | MDR-TB | lineage4.3.3 | None | SAMN02360615 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02414852 | MDR-TB | lineage4.3.3 | se | SRR6152640 | HR-TB | lineage3 | ca | SAMN02414905 | MDR-TB | lineage4.3.3 | se | SAMN02403575 | Pre-XDR-TB | lineage4.1.1.1 | za | SAMN02403574 | MDR-TB | lineage4.1.1.1 | za | ERR4827439 | MDR-TB | lineage2.2.1 | None | ERR4830787 | MDR-TB | lineage4.2.2.2 | None | SRR7585434 | Pre-XDR-TB | lineage3 | in | ERR4830784 | MDR-TB | lineage4.2.2.2 | et | ERR4799557 | MDR-TB | lineage4.3.3 | in | ERR4811327 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4830593 | MDR-TB | lineage2.2.1 | tm | ERR2510851 | MDR-TB | lineage4.3.2 | it | ERR3287497 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR2510429 | MDR-TB | lineage1.1.2 | pk | ERR3287615 | MDR-TB | lineage4.3.4.2 | pe | SRR11662629 | MDR-TB | lineage2.2.1 | None | ERR4831993 | MDR-TB | lineage2.2.1 | vn | ERR4800116 | Pre-XDR-TB | lineage4.3.3 | None | ERR5979473 | MDR-TB | lineage3 | None | ERR5866510 | MDR-TB | lineage4.3.3 | None | SRR1049067 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013672 | Pre-XDR-TB | lineage2.2 | None | SRR1049066 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013673 | Pre-XDR-TB | lineage2.2.2 | None | SRR1146383 | MDR-TB | lineage4.3.3 | None | SRR1144777 | MDR-TB | lineage4.3.3 | None | SRR1165671 | MDR-TB | lineage4.1.1 | None | SRR1163030 | MDR-TB | lineage4.3.3 | None | SRR1165456 | MDR-TB | lineage4.3.3 | None | SRR1165672 | Pre-XDR-TB | lineage4.1.1 | None | SRR1162793 | MDR-TB | lineage4.3.3 | None | SRR1163196 | MDR-TB | lineage4.3.3 | None | SRR1165681 | MDR-TB | lineage4.1.1 | None | SRR1165724 | Pre-XDR-TB | lineage4.1.1 | None | SRR1169195 | MDR-TB | lineage4.1.1 | None | SRR1166913 | MDR-TB | lineage4.3.3 | None | SRR1167120 | MDR-TB | lineage4.3.3 | None | SRR12142322 | MDR-TB | lineage2.2.1 | None | SRR1169313 | MDR-TB | lineage4.1.1 | None | SRR1172109 | MDR-TB | lineage4.1.1 | None | SRR1169225 | MDR-TB | lineage4.1.1 | None | SRR13870391 | Pre-XDR-TB | lineage4.3.4.2 | None |
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