ERR1465793
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR6280195
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR1035323
|
MDR-TB
|
lineage4.3.3
|
br
|
SRR3082075
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR3082074
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR3082094
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
ERR1035306
|
Pre-XDR-TB
|
lineage4.3.3
|
br
|
SRR3082135
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR1035320
|
MDR-TB
|
lineage4.3.4.2
|
br
|
SRR3085308
|
MDR-TB
|
|
None
|
SRR3085310
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
SRR3085309
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR3085311
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
SRR3085312
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
SRR671807
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR3085366
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR3105783
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR671724
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR6824470
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR245741
|
MDR-TB
|
lineage4.3.4.2.1
|
mw
|
SRR3086378
|
MDR-TB
|
|
None
|
SRR3105787
|
Pre-XDR-TB
|
|
None
|
ERR4814477
|
MDR-TB
|
lineage3
|
None
|
ERR1034656
|
MDR-TB
|
lineage4.5
|
bg
|
SRR6824689
|
MDR-TB
|
lineage2.2.1.1
|
cn
|
ERR4812818
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4812846
|
MDR-TB
|
lineage4.3
|
None
|
ERR552077
|
MDR-TB
|
lineage4.4.1.1
|
sz
|
SRR6367399
|
MDR-TB
|
lineage1.1.2
|
au
|
ERR2041757
|
MDR-TB
|
lineage4.1.2.1
|
rs
|
SRR5709994
|
MDR-TB
|
lineage2.2.1
|
th
|
SRR6824570
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR2041750
|
MDR-TB
|
lineage4.1.2.1
|
rs
|
SRR671826
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR6339662
|
MDR-TB
|
lineage2.2.1
|
au
|
SRR1723941
|
HR-TB
|
lineage4.5
|
cn
|
SRR8237389
|
MDR-TB
|
lineage2.2.2
|
pg
|
ERR212078
|
HR-TB
|
lineage4.3.4.2.1
|
mw
|
ERR4813549
|
MDR-TB
|
lineage4
|
None
|
ERR4813571
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4813661
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMN02586049
|
MDR-TB
|
lineage4.8.1
|
za
|
ERR1034735
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR1034816
|
MDR-TB
|
lineage4.3.4.2.1
|
pt
|
ERR4817365
|
MDR-TB
|
lineage3
|
None
|
ERR1034792
|
HR-TB
|
lineage4
|
pe
|
SRR5485505
|
MDR-TB
|
|
None
|
SRR3743375
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMN02567685
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR163953
|
MDR-TB
|
lineage4.3.4.2.1
|
mw
|
SRR3732646
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4816894
|
MDR-TB
|
lineage3
|
None
|
SRR3743384
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1035099
|
Pre-XDR-TB
|
lineage2.2.1.1
|
vn
|
ERR176752
|
HR-TB
|
lineage4.3.4.2.1
|
mw
|
SRR5818699
|
MDR-TB
|
lineage1.1.2
|
dj
|
SRR5073603
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR4818203
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR5818695
|
MDR-TB
|
lineage1.1.2
|
dj
|
SRR5818575
|
MDR-TB
|
lineage1.1.2
|
dj
|
SRR5818697
|
MDR-TB
|
lineage1.1.2
|
dj
|
ERR751607
|
MDR-TB
|
lineage4.3.2
|
pe
|
SRR5125076
|
MDR-TB
|
lineage3
|
None
|
SRR5125077
|
MDR-TB
|
lineage3
|
None
|
SRR5818576
|
MDR-TB
|
lineage1.1.2
|
dj
|
ERR047886
|
MDR-TB
|
lineage4.8
|
gb
|
ERR779883
|
MDR-TB
|
lineage4
|
pe
|
SRR5125074
|
MDR-TB
|
lineage3
|
None
|
ERR067749
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR5125078
|
MDR-TB
|
lineage3
|
None
|
SRR5152939
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR751558
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR751405
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SRR5153601
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR751466
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR1193763
|
MDR-TB
|
lineage4.3
|
np
|
SRR5153316
|
MDR-TB
|
lineage4.2.1.1
|
None
|
SRR5153611
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR502885
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4820283
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR5153619
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5153621
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR7911137
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR5153811
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR7911182
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR7911169
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR7911158
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR7911292
|
MDR-TB
|
lineage2.2.1
|
vn
|
SAMEA2535041
|
MDR-TB
|
lineage2.2.1
|
uz
|
SAMN02414935
|
MDR-TB
|
lineage4.4.1.1
|
se
|
SAMN02414911
|
MDR-TB
|
lineage4.8
|
se
|
SRR2100881
|
HR-TB
|
lineage3.1.2
|
None
|
SAMN02414946
|
MDR-TB
|
lineage4.4.1.1
|
se
|
ERR2516610
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7911555
|
Pre-XDR-TB
|
lineage2.2.2
|
za
|
SAMN02360603
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
ERR046821
|
MDR-TB
|
lineage4.8
|
gb
|
ERR046796
|
Pre-XDR-TB
|
lineage4.8
|
gb
|
SRR2100097
|
MDR-TB
|
lineage4.8
|
None
|
ERR046903
|
Pre-XDR-TB
|
lineage4.8
|
gb
|
SRR6153125
|
Other
|
lineage4.4.1.1
|
ca
|
SRR2100131
|
MDR-TB
|
lineage4.8
|
None
|
ERR4820576
|
MDR-TB
|
lineage3
|
None
|
ERR2516138
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2100132
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR2707042
|
MDR-TB
|
lineage4.3.4.1
|
cd
|
ERR2707071
|
MDR-TB
|
lineage4.3.4.1
|
cd
|
ERR2707188
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
ERR4820942
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR2100392
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR1166171
|
MDR-TB
|
lineage4.8
|
ro
|
ERR2707141
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR2707010
|
MDR-TB
|
lineage4.3.4.1
|
cd
|
ERR751447
|
MDR-TB
|
lineage4
|
pe
|
ERR038750
|
MDR-TB
|
lineage4.6.1.2
|
ug
|
SRR5486906
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SAMEA3715558
|
MDR-TB
|
lineage4.1.2.1
|
rs
|
ERR1873522
|
MDR-TB
|
lineage2.2.1.1
|
za
|
SRR5486875
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR5486897
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR2653083
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2653064
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
ERR2653081
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
ERR4827880
|
HR-TB
|
lineage2.2.1
|
None
|
ERR270781
|
HR-TB
|
lineage3.1.2
|
None
|
ERR4827824
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827780
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827781
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5817468
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5817462
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1213923
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR5817476
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
SRR5817477
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
ERR3335726
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR4797556
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4798786
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR5894884
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR3335728
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR1213837
|
RR-TB
|
lineage4.9
|
kr
|
ERR4798816
|
Pre-XDR-TB
|
lineage4.9;lineage4.1.1.3;lineage3;lineage2.2.1
|
in
|
ERR4797635
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797702
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797939
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR2179627
|
HR-TB
|
lineage4.5
|
cn
|
ERR4797794
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4797898
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797789
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4798933
|
MDR-TB
|
lineage4.3.3
|
in
|
ERR4797975
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR2516868
|
Pre-XDR-TB
|
lineage4.2.2.2
|
gb
|
ERR4798017
|
XDR-TB
|
lineage2.2.1
|
in
|
ERR4797875
|
MDR-TB
|
lineage4.1.2.1
|
in
|
ERR2517008
|
Pre-XDR-TB
|
lineage4.8
|
gb
|
ERR4822358
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516792
|
MDR-TB
|
lineage4.3.4.1
|
gb
|
ERR2516521
|
MDR-TB
|
lineage4
|
nl
|
ERR2517045
|
Pre-XDR-TB
|
lineage4.4.1.1
|
gb
|
ERR4798952
|
MDR-TB
|
lineage4.1.2.1;lineage1.1.2
|
in
|
ERR4798926
|
MDR-TB
|
lineage4.1.2.1;lineage1.1.2
|
in
|
ERR2516561
|
MDR-TB
|
lineage4
|
nl
|
ERR4798055
|
MDR-TB
|
lineage4.3
|
in
|
ERR4796744
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR2516472
|
MDR-TB
|
lineage4
|
pe
|
ERR4798364
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR4796384
|
Pre-XDR-TB
|
lineage4.3.3
|
in
|
ERR2516414
|
MDR-TB
|
lineage4
|
pe
|
ERR4798129
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796506
|
Pre-XDR-TB
|
lineage3.1.2.1
|
in
|
ERR4829931
|
Pre-XDR-TB
|
lineage4.1.1.2;lineage3
|
None
|
ERR2516548
|
MDR-TB
|
lineage4
|
pe
|
ERR3335755
|
Pre-XDR-TB
|
lineage3.1.3
|
pk
|
ERR2516541
|
XDR-TB
|
lineage4
|
pe
|
ERR2843457
|
HR-TB
|
lineage1.1.1.1
|
None
|
ERR2516492
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4796599
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR2516636
|
MDR-TB
|
lineage4.3.4.1
|
pe
|
ERR4797864
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4796256
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796608
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796995
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4829993
|
Pre-XDR-TB
|
lineage4.6.2.2
|
None
|
ERR4798080
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4796424
|
XDR-TB
|
lineage2.2.1
|
in
|
ERR4796509
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796659
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4798242
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796627
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796700
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796484
|
Pre-XDR-TB
|
lineage1.2.2.2
|
in
|
ERR4799591
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4796628
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4830843
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4796743
|
Pre-XDR-TB
|
lineage2.2.1;lineage1.2.2.2
|
in
|
ERR4799819
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4798436
|
Pre-XDR-TB
|
lineage1.2.2.2
|
in
|
ERR4799873
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796613
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796968
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796816
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798286
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796820
|
XDR-TB
|
lineage2.2.1
|
in
|
ERR4798274
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4811066
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR4798425
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796850
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4810930
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR4810478
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR4811045
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR4810966
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR4796937
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR8651567
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR4796802
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4798551
|
Pre-XDR-TB
|
lineage4.3.3
|
in
|
ERR4796893
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797102
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796906
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4810891
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR6339664
|
MDR-TB
|
lineage2.1
|
None
|
SRR6356948
|
RR-TB
|
lineage4.2.1
|
None
|
ERR4810625
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR4798421
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4798568
|
Pre-XDR-TB
|
lineage4.2.2
|
in
|
ERR4797326
|
MDR-TB
|
lineage2.2.1
|
in
|
SRR6485165
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR4797358
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR4798633
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR6256966
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797419
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4810998
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR4799572
|
Pre-XDR-TB
|
lineage4.4
|
in
|
ERR4811297
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR6153036
|
Other
|
|
None
|
ERR4811354
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR4797393
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799446
|
Pre-XDR-TB
|
lineage3.1.2.1
|
in
|
ERR4797360
|
Pre-XDR-TB
|
lineage4.4
|
in
|
SRR6257045
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR8651620
|
RR-TB
|
lineage2.2.1
|
cn
|
ERR4797711
|
Pre-XDR-TB
|
lineage2.2.1;lineage1.2.2.2
|
in
|
ERR4797467
|
Other
|
lineage1.1.2
|
in
|
ERR4799362
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797508
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4798744
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797545
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799529
|
XDR-TB
|
lineage2.2.1
|
in
|
ERR4797565
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR4798044
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4831025
|
HR-TB
|
lineage3
|
np
|
ERR4797651
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4830663
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
ERR4830916
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
ERR4830940
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
ERR4799490
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4799519
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799395
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799937
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799746
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR4799587
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
ERR4799964
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4800023
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR2510882
|
Pre-XDR-TB
|
lineage4.2.1.1
|
it
|
ERR4829007
|
Pre-XDR-TB
|
lineage2.2.1
|
it
|
ERR4800349
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800090
|
Pre-XDR-TB
|
lineage4.2.2
|
in
|
ERR4800291
|
XDR-TB
|
lineage2.2.1
|
in
|
ERR4800292
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800376
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800572
|
Pre-XDR-TB
|
lineage4.8
|
in
|
ERR4800392
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800478
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4829054
|
MDR-TB
|
lineage1.2.2.2
|
it
|
ERR4800551
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800519
|
MDR-TB
|
lineage4.1.2.1
|
in
|
ERR4829120
|
MDR-TB
|
lineage4.8
|
it
|
ERR4800497
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800590
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR4800567
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800563
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4800537
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR3077948
|
MDR-TB
|
lineage3.1.1;lineage1.1.2
|
None
|
ERR4829486
|
Pre-XDR-TB
|
lineage4.1.2
|
it
|
ERR4830783
|
Pre-XDR-TB
|
lineage1.1.2
|
et
|
ERR4830791
|
Pre-XDR-TB
|
lineage1.1.2
|
et
|
ERR4830808
|
Pre-XDR-TB
|
lineage1.1.2
|
et
|
ERR4830841
|
Pre-XDR-TB
|
lineage1.1.2
|
et
|
ERR3077950
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR3132289
|
RR-TB
|
lineage4.9
|
None
|
ERR4829794
|
MDR-TB
|
lineage4.2.1
|
it
|
ERR3148042
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4830842
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR3077997
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR3078000
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4813381
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SRR6785433
|
MDR-TB
|
lineage4.2.1.1
|
None
|
SRR6785230
|
HR-TB
|
|
None
|
ERR4872208
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR6832028
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832548
|
MDR-TB
|
lineage4.2.1.1
|
None
|
SRR6785472
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832301
|
MDR-TB
|
lineage4.2.1.1
|
None
|
SRR6797765
|
MDR-TB
|
lineage4.8
|
None
|
SRR6832684
|
MDR-TB
|
lineage4.2.1.1
|
None
|
SRR6807686
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6832812
|
Pre-XDR-TB
|
lineage4.2.1.1
|
None
|
ERR3287528
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR4813198
|
Pre-XDR-TB
|
lineage4.3.2
|
pe
|
ERR3287721
|
MDR-TB
|
lineage4
|
pe
|
ERR4829095
|
Pre-XDR-TB
|
lineage1.1.2
|
dj
|
ERR4829106
|
MDR-TB
|
lineage3.1.1
|
dj
|
ERR3287791
|
MDR-TB
|
lineage4
|
pe
|
ERR3287846
|
XDR-TB
|
lineage4
|
pe
|
ERR3287637
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR3287482
|
MDR-TB
|
lineage4
|
pe
|
ERR3287390
|
HR-TB
|
lineage4
|
pe
|
ERR3287641
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4830766
|
MDR-TB
|
lineage4.3.3
|
ir
|
ERR3287360
|
MDR-TB
|
lineage4
|
pe
|
ERR4815688
|
MDR-TB
|
lineage1.1.2
|
gb
|
ERR2510355
|
Pre-XDR-TB
|
lineage2.2.1
|
pk
|
ERR2184365
|
HR-TB
|
lineage4
|
pe
|
ERR11488663
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR2510620
|
MDR-TB
|
lineage3.1.3
|
pk
|
ERR3077939
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR4829852
|
MDR-TB
|
lineage4.2.1
|
it
|
ERR2184596
|
HR-TB
|
lineage4
|
pe
|
ERR3132174
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287597
|
MDR-TB
|
lineage4
|
pe
|
ERR2510688
|
MDR-TB
|
lineage4.2.1
|
it
|
ERR11488363
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR7516331
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7516328
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7516388
|
Pre-XDR-TB
|
lineage4;lineage2.2.1
|
None
|
SRR9971344
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR8351921
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9738505
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR9738536
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR8357426
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7592361
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR4819736
|
Pre-XDR-TB
|
lineage3
|
gb
|
SRR7652977
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7645825
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7646020
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971070
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR7592389
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR11489001
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR11488981
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR11488982
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR11488833
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR9217357
|
MDR-TB
|
lineage1.2.2.2
|
None
|
DRR130113
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
DRR034391
|
HR-TB
|
lineage2.2.1
|
None
|
DRR130107
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
DRR130165
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
DRR130176
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR11488747
|
MDR-TB
|
lineage4.7
|
None
|
DRR130200
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR11488442
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
DRR454965
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11798532
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11798561
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11488955
|
Pre-XDR-TB
|
lineage4.7
|
None
|
ERR046944
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR072082
|
MDR-TB
|
lineage4.8
|
None
|
ERR046977
|
MDR-TB
|
lineage4.8
|
None
|
ERR047891
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR4819512
|
MDR-TB
|
lineage1.1.2
|
gb
|
ERR072083
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR11488530
|
Pre-XDR-TB
|
lineage4.8.1
|
None
|
ERR11488753
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR11488531
|
Pre-XDR-TB
|
lineage4.8.1
|
None
|
ERR10680087
|
MDR-TB
|
lineage4.1
|
None
|
ERR12115310
|
MDR-TB
|
lineage1.1.3.1
|
None
|
ERR12117938
|
MDR-TB
|
lineage4
|
None
|
ERR12117945
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1063848
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR10680082
|
MDR-TB
|
lineage6.2.2
|
None
|
ERR10762233
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10680145
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR10680172
|
RR-TB
|
lineage5.1.5
|
None
|
ERR10680095
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR10680110
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR11043737
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10762382
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR10762335
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR11043393
|
MDR-TB
|
lineage4.8
|
None
|
ERR114421
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR11044153
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11488364
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR2513160
|
Pre-XDR-TB
|
lineage3
|
gb
|
ERR12117965
|
MDR-TB
|
lineage4
|
None
|
ERR1367634
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR3287542
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR3273178
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR3287521
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3273107
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR3284103
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2513352
|
Pre-XDR-TB
|
lineage4.4.1.1
|
gb
|
ERR3287558
|
MDR-TB
|
lineage4
|
None
|
ERR3290820
|
MDR-TB
|
lineage2.2.1.2
|
None
|
ERR3639727
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR3639801
|
MDR-TB
|
lineage3.1.2.1
|
None
|
ERR3287555
|
MDR-TB
|
lineage4
|
None
|
ERR3287557
|
MDR-TB
|
lineage4
|
None
|
ERR3287686
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3509857
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR3639707
|
MDR-TB
|
lineage4.8
|
None
|
ERR3639739
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3794517
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4024740
|
HR-TB
|
lineage4
|
None
|
ERR4024619
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4024983
|
HR-TB
|
lineage4
|
None
|
ERR4024944
|
MDR-TB
|
lineage4
|
None
|
ERR4024971
|
HR-TB
|
lineage4
|
None
|
ERR4178236
|
HR-TB
|
lineage4
|
None
|
ERR4457776
|
MDR-TB
|
lineage4
|
None
|
ERR4423635
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4457779
|
HR-TB
|
lineage4
|
None
|
ERR4423480
|
Pre-XDR-TB
|
lineage4.6.2.2
|
None
|
ERR4423732
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR4457791
|
HR-TB
|
lineage4
|
None
|
ERR4457846
|
HR-TB
|
lineage4
|
None
|
ERR4457795
|
HR-TB
|
lineage4
|
None
|
ERR4457831
|
HR-TB
|
lineage4
|
None
|
ERR4457858
|
HR-TB
|
lineage4
|
None
|
ERR4457878
|
HR-TB
|
lineage4
|
None
|
ERR4457849
|
HR-TB
|
lineage4
|
None
|
ERR4457861
|
MDR-TB
|
lineage4
|
None
|
ERR4457870
|
HR-TB
|
lineage4
|
None
|
ERR4553443
|
MDR-TB
|
lineage4.8
|
None
|
ERR4457892
|
HR-TB
|
lineage4
|
None
|
ERR4457900
|
HR-TB
|
lineage4
|
None
|
ERR4553460
|
MDR-TB
|
lineage4.8
|
None
|
ERR4553527
|
MDR-TB
|
|
None
|
ERR4553444
|
MDR-TB
|
lineage4.8
|
None
|
ERR4553462
|
MDR-TB
|
lineage4.8
|
None
|
ERR4553587
|
MDR-TB
|
|
None
|
ERR4553525
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR4553542
|
MDR-TB
|
lineage4.8
|
None
|
ERR4553570
|
MDR-TB
|
|
None
|
ERR4553622
|
MDR-TB
|
|
None
|
ERR4553676
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4553628
|
MDR-TB
|
|
None
|
ERR4553645
|
MDR-TB
|
|
None
|
ERR4553673
|
MDR-TB
|
lineage4.8
|
None
|
ERR4553742
|
MDR-TB
|
lineage4.8
|
None
|
ERR4553732
|
MDR-TB
|
|
None
|
ERR4553767
|
MDR-TB
|
lineage4.8
|
None
|
ERR4553805
|
RR-TB
|
|
None
|
ERR4553790
|
MDR-TB
|
lineage4.8
|
None
|
ERR4553796
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4553897
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR4553888
|
MDR-TB
|
lineage4.8
|
None
|
ERR4553846
|
MDR-TB
|
lineage4.8
|
None
|
ERR4553950
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR4553926
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR11488892
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR4553959
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR2514155
|
HR-TB
|
lineage4.1.1.3
|
gb
|
ERR2516041
|
HR-TB
|
lineage4.4.1.1
|
za
|
ERR11798543
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4553885
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR4831476
|
HR-TB
|
lineage1.1.2
|
None
|
ERR4798997
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4809154
|
MDR-TB
|
lineage2.2.1.1
|
za
|
ERR4828609
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR5863850
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4813751
|
MDR-TB
|
lineage4.1.1.3
|
br
|
ERR4809355
|
MDR-TB
|
lineage4.1.2
|
za
|
ERR4800623
|
HR-TB
|
lineage3
|
None
|
ERR4828394
|
HR-TB
|
lineage1.1.1.1
|
vn
|
SRR16087878
|
Pre-XDR-TB
|
lineage4.2.1.1
|
None
|
ERR5863902
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5863904
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5863908
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5863903
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5863906
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5863909
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5863907
|
MDR-TB
|
lineage2.2
|
None
|
ERR5863905
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864522
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR5864523
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR5864520
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR5864527
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR5864526
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR5864525
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR5864521
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR5864528
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR5864524
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR5864726
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864729
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864727
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864728
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864730
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864725
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864731
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864732
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864733
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864736
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864734
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864735
|
MDR-TB
|
lineage2.2
|
None
|
ERR5864737
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865413
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865414
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865416
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865415
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865418
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865417
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865614
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR5865846
|
Pre-XDR-TB
|
lineage4.2.1.1
|
None
|
ERR5865916
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866052
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR5866053
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR5866495
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5897074
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR5897079
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR5897108
|
MDR-TB
|
lineage3
|
None
|
ERR5979414
|
MDR-TB
|
lineage3.1.2.1
|
None
|
ERR5865615
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR17657935
|
RR-TB
|
lineage4.9
|
None
|
ERR6362780
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR6362661
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR6397178
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR6865567
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6866849
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR26112471
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6879030
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11466511
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR7339054
|
HR-TB
|
lineage4
|
None
|
SRR27107258
|
Pre-XDR-TB
|
lineage4.3
|
None
|
ERR9029858
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7910890
|
MDR-TB
|
lineage4
|
None
|
SRR24255946
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR7911349
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR11662321
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR776661
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR24256340
|
MDR-TB
|
lineage4.2.1.1
|
None
|
SRR24256365
|
MDR-TB
|
lineage4.2.1.1
|
None
|
ERR7910889
|
MDR-TB
|
lineage4
|
None
|
ERR7911350
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR21732563
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR24466794
|
MDR-TB
|
lineage4.8
|
None
|
ERR7975663
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25534517
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8774245
|
Pre-XDR-TB
|
lineage4.6.2.2
|
None
|
ERR8774260
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR8774428
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR9029844
|
MDR-TB
|
lineage4
|
None
|
ERR9029870
|
MDR-TB
|
lineage4
|
None
|
ERR9634282
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9119602
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR9119941
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR9286028
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR9119940
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR987755
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR987758
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR9907675
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR9907706
|
MDR-TB
|
lineage4.3.4
|
None
|
ERR9907768
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR1013633
|
MDR-TB
|
lineage2.2
|
None
|
ERR9907771
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR9992786
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR11662603
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1013648
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1013649
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR10379986
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10305633
|
HR-TB
|
lineage4.5
|
None
|
SRR10397137
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10379997
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10380021
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10500308
|
HR-TB
|
lineage1.1.2
|
None
|
SRR1049677
|
MDR-TB
|
lineage4.8;lineage4.3.3
|
None
|
SRR1049044
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1049045
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1049676
|
MDR-TB
|
lineage4.8;lineage4.3.3
|
None
|
SRR1062920
|
MDR-TB
|
lineage4.8;lineage4.3.3
|
None
|
SRR10525329
|
MDR-TB
|
lineage4.8
|
None
|
SRR10808658
|
HR-TB
|
lineage4
|
None
|
SRR10686529
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR1162884
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR10808910
|
HR-TB
|
lineage4
|
None
|
SRR1146418
|
MDR-TB
|
lineage4
|
None
|
SRR1146384
|
MDR-TB
|
lineage4.8
|
None
|
SRR1162814
|
MDR-TB
|
lineage4.8
|
None
|
SRR1140574
|
MDR-TB
|
lineage4.8;lineage4.3.3
|
None
|
SRR1144821
|
MDR-TB
|
lineage4
|
None
|
SRR1162866
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1162887
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1173343
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1163077
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1165444
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11050361
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR1166818
|
MDR-TB
|
lineage4.8
|
None
|
SRR1167087
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1172732
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR1175049
|
RR-TB
|
|
None
|
SRR1174277
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1175058
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1184377
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR11871417
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11871428
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11871411
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1196475
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR11871433
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11871435
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11972161
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11972253
|
MDR-TB
|
lineage1.1.3
|
None
|
SRR11972250
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR11972439
|
MDR-TB
|
lineage1.1.3
|
None
|
SRR12142362
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13180429
|
MDR-TB
|
lineage4.8
|
None
|
SRR14782686
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14088364
|
MDR-TB
|
lineage3
|
None
|
SRR14088388
|
HR-TB
|
lineage3.1.3
|
None
|
SRR13583500
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR15014654
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR15014602
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR15315952
|
RR-TB
|
lineage2.2.1
|
None
|
SRR15014758
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR15904138
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16088475
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16087957
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16370412
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR16370314
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16370534
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16370458
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16370529
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16370557
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16370692
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662395
|
MDR-TB
|
lineage1.1.1
|
None
|
SRR17234901
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR16509481
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR17406744
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR18213771
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR24256078
|
MDR-TB
|
lineage4.2.1.1
|
None
|
SRR18593212
|
MDR-TB
|
lineage4.9
|
None
|
SRR18548991
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715071
|
Pre-XDR-TB
|
lineage4.2.1.1
|
None
|
SRR18593222
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
SRR18714960
|
Pre-XDR-TB
|
lineage4.2.1.1
|
None
|
SRR18593232
|
MDR-TB
|
lineage4.9;lineage2.2.1
|
None
|
SRR18714971
|
Pre-XDR-TB
|
lineage4.2.1.1
|
None
|
SRR18715041
|
Pre-XDR-TB
|
lineage4.2.1.1
|
None
|
SRR18715118
|
Pre-XDR-TB
|
lineage4.2.1.1
|
None
|
SRR20969892
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR18715372
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR20969411
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715333
|
MDR-TB
|
lineage4.2.1.1;lineage2.2.1
|
None
|
SRR25206922
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827708
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR24673504
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827519
|
Pre-XDR-TB
|
lineage3;lineage2.2.1
|
None
|
SRR25206995
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR17657953
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR25207140
|
RR-TB
|
lineage2.2.1
|
None
|
SRR25827430
|
Pre-XDR-TB
|
lineage4;lineage2.2.1
|
None
|
SRR25827856
|
MDR-TB
|
lineage3;lineage2.2.1
|
None
|
SRR25827503
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827875
|
Pre-XDR-TB
|
lineage3;lineage2.2.1;lineage1.2.2.2
|
None
|
SRR25827530
|
XDR-TB
|
lineage4;lineage2.2.1
|
None
|
SRR25827657
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR25827622
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827641
|
XDR-TB
|
lineage4;lineage2.2.1
|
None
|
SRR25827333
|
MDR-TB
|
lineage3
|
None
|
SRR25827294
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21277222
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827408
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21276948
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21277275
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22175222
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21277287
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR21576543
|
MDR-TB
|
lineage4.5
|
None
|
SRR21576694
|
MDR-TB
|
lineage4.5
|
None
|
SRR21576734
|
MDR-TB
|
lineage1.2.1.2
|
None
|
SRR22175173
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
SRR22175214
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21685364
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR21747065
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR22175213
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22424839
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22175244
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22424818
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22424820
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22424929
|
MDR-TB
|
lineage3
|
None
|
SRR22424890
|
MDR-TB
|
lineage4.8
|
None
|
SRR22528535
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22528520
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22528531
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22528574
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11068535
|
Pre-XDR-TB
|
lineage4.2.1.1;lineage2.2
|
None
|
ERR11082841
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR11081228
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR11081403
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR11081426
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11081926
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11082310
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR11081377
|
MDR-TB
|
lineage4.8
|
None
|
ERR11082700
|
RR-TB
|
lineage4.8
|
None
|
ERR11083023
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR11082958
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR21887780
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR11138620
|
RR-TB
|
lineage2.2.1
|
None
|
ERR8025746
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR10610106
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806640
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR8025478
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR6797646
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR21887695
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26399432
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6797799
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR22873603
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24710158
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827570
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25534392
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26936966
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207175
|
Pre-XDR-TB
|
lineage4.2.2
|
None
|
SRR25206967
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25206950
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207108
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207197
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207217
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26937077
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207253
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207268
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26936959
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207332
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25515236
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710176
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25515260
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207046
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25206964
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207118
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207275
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR25207269
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207315
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207397
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827627
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25515174
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827362
|
XDR-TB
|
lineage3;lineage2.2.1
|
None
|
SRR25827448
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827731
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24255983
|
MDR-TB
|
lineage4.2.1.1
|
None
|
SRR25827781
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR24256185
|
Pre-XDR-TB
|
lineage4.2.1.1
|
None
|
SRR24256198
|
Pre-XDR-TB
|
lineage4.2.1.1
|
None
|
SRR25827472
|
Pre-XDR-TB
|
lineage3;lineage2.2.1
|
None
|
SRR25827528
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR25827475
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR671853
|
RR-TB
|
lineage4.5
|
cn
|
SRR5341359
|
Pre-XDR-TB
|
lineage1.1.2
|
in
|
SRR25827537
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR5341385
|
Pre-XDR-TB
|
lineage3
|
in
|
SRR1723708
|
MDR-TB
|
lineage2.2.1.1
|
cn
|
SRR1723778
|
MDR-TB
|
lineage2.2.1
|
cn
|