lineage | Count |
---|---|
lineage2.2.1 | 112 |
lineage1.1.2 | 2 |
lineage4.1.2.1 | 1 |
lineage2.2.2 | 2 |
lineage4.1.1.3 | 1 |
lineage2.2.1;lineage4.3.2.1 | 1 |
lineage4.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 120 |
ID | Drug resistance | Lineage | Country iso2 | SRR1173140 | Pre-XDR-TB | lineage2.2.1 | None | ERR550779_ERR550777_ERR550778 | MDR-TB | lineage2.2.1 | None | ERR3794541 | MDR-TB | lineage2.2.1 | None | ERR551623_ERR551624 | MDR-TB | lineage2.2.1 | None | ERR3132084 | MDR-TB | lineage1.1.2 | None | ERR4830758 | Pre-XDR-TB | lineage2.2.1 | ir | ERR552513_ERR552514 | MDR-TB | lineage2.2.1 | None | ERR551595 | MDR-TB | lineage2.2.1 | None | ERR552346 | MDR-TB | lineage2.2.1 | None | SAMEA2533485 | MDR-TB | lineage2.2.1 | uz | SAMEA2534696 | MDR-TB | lineage2.2.1 | uz | ERR553218 | MDR-TB | lineage2.2.1 | None | ERR553217 | MDR-TB | lineage2.2.1 | None | ERR552346_ERR552347 | MDR-TB | lineage2.2.1 | None | ERR3794379 | MDR-TB | lineage2.2.1 | None | SRR10040341 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02628510 | Pre-XDR-TB | lineage2.2.1 | ir | ERR551539_ERR551540 | MDR-TB | lineage2.2.1 | None | SAMEA2534634 | MDR-TB | lineage2.2.1 | uz | ERR551422_ERR551424_ERR551423 | MDR-TB | lineage2.2.1 | None | ERR4831234 | MDR-TB | lineage2.2.1 | None | ERR551422 | MDR-TB | lineage2.2.1 | None | ERR553180 | MDR-TB | lineage2.2.1 | None | ERR4829956 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR550808 | MDR-TB | lineage2.2.1 | None | ERR552631 | MDR-TB | lineage2.2.1 | None | SAMEA2534076 | MDR-TB | lineage2.2.1 | uz | DRR130140 | MDR-TB | lineage2.2.1 | None | SRR10147707 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515349 | MDR-TB | lineage2.2.2 | None | ERR13284838 | MDR-TB | lineage2.2.1 | None | ERR550683_ERR550682_ERR550681 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827783 | MDR-TB | lineage2.2.1 | None | SRR23938674 | MDR-TB | lineage2.2.1 | None | ERR11081607 | MDR-TB | lineage2.2.1 | None | ERR3794440 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2534128 | MDR-TB | lineage2.2.1 | uz | SAMEA2535195 | MDR-TB | lineage2.2.1 | uz | ERR3794446 | MDR-TB | lineage2.2.1 | None | ERR550681 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284764 | MDR-TB | lineage2.2.1 | None | ERR553180_ERR553181 | MDR-TB | lineage2.2.1 | None | ERR3148159 | MDR-TB | lineage4.1.1.3 | mx | ERR2677451 | MDR-TB | lineage2.2.1 | de | ERR550682 | MDR-TB | lineage2.2.1 | None | ERR552418 | MDR-TB | lineage2.2.1 | None | ERR2516835 | MDR-TB | lineage2.2.1 | gb | SAMEA2533932 | MDR-TB | lineage2.2.1 | uz | ERR3794535 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794402 | MDR-TB | lineage2.2.1 | None | SRR1174309 | Pre-XDR-TB | lineage2.2.1 | None | ERR552509 | MDR-TB | lineage2.2.1 | None | ERR13284660 | MDR-TB | lineage2.2.1 | None | SRR28706565 | Pre-XDR-TB | lineage2.2.1 | None | ERR551539 | MDR-TB | lineage2.2.1 | None | ERR551623 | MDR-TB | lineage2.2.1 | None | ERR551649 | MDR-TB | lineage2.2.1 | None | ERR13284882 | MDR-TB | lineage2.2.1 | None | SRR28046235 | HR-TB | lineage1.1.2 | None | ERR3794441 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794468 | MDR-TB | lineage2.2.1 | None | ERR550777 | MDR-TB | lineage2.2.1 | None | ERR551424 | MDR-TB | lineage2.2.1 | None | ERR551596 | MDR-TB | lineage2.2.1 | None | ERR552347 | MDR-TB | lineage2.2.1 | None | ERR552510 | MDR-TB | lineage2.2.1 | None | ERR551697_ERR551698 | MDR-TB | lineage2.2.1 | None | ERR551697 | MDR-TB | lineage2.2.1 | None | ERR552733 | MDR-TB | lineage2.2.1 | None | ERR553217_ERR553218 | MDR-TB | lineage2.2.1 | None | SRR24710011 | MDR-TB | lineage2.2.1 | None | ERR552632_ERR552631 | MDR-TB | lineage2.2.1 | None | ERR552734 | MDR-TB | lineage2.2.1 | None | SAMEA2534091 | MDR-TB | lineage2.2.1 | uz | ERR551648 | MDR-TB | lineage2.2.1 | None | ERR551596_ERR551595 | MDR-TB | lineage2.2.1 | None | ERR552514 | MDR-TB | lineage2.2.1 | None | SRR28706554 | MDR-TB | lineage2.2.1 | None | ERR4822351 | MDR-TB | lineage2.2.1 | None | ERR552417 | MDR-TB | lineage2.2.1 | None | ERR551100 | MDR-TB | lineage2.2.1 | None | SRR24709927 | MDR-TB | lineage2.2.1 | None | ERR553181 | MDR-TB | lineage2.2.1 | None | SRR23938673 | MDR-TB | lineage2.2.1 | None | SAMEA2534859 | MDR-TB | lineage2.2.1 | uz | SRR10430396 | MDR-TB | lineage2.2.1;lineage4.3.2.1 | None | SRR24710274 | Pre-XDR-TB | lineage2.2.1 | None | ERR551648_ERR551649 | MDR-TB | lineage2.2.1 | None | ERR552417_ERR552418 | MDR-TB | lineage2.2.1 | None | SRR19612363 | Other | lineage2.2.1 | None | SAMEA2534012 | MDR-TB | lineage2.2.1 | uz | ERR550683 | MDR-TB | lineage2.2.1 | None | SAMEA2535218 | MDR-TB | lineage2.2.1 | uz | ERR3794533 | Pre-XDR-TB | lineage2.2.1 | None | ERR552513 | MDR-TB | lineage2.2.1 | None | ERR550778 | MDR-TB | lineage2.2.1 | None | ERR550779 | MDR-TB | lineage2.2.1 | None | SRR24710269 | MDR-TB | lineage2.2.1 | None | ERR3794398 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2534582 | MDR-TB | lineage2.2.1 | uz | SRR6256995 | HR-TB | lineage4.2.1.1 | None | SAMEA2533701 | MDR-TB | lineage2.2.1 | uz | ERR552734_ERR552733 | MDR-TB | lineage2.2.1 | None | ERR550808_ERR550809 | MDR-TB | lineage2.2.1 | None | SRR13232618 | Pre-XDR-TB | lineage2.2.1 | None | ERR551423 | RR-TB | lineage2.2.1 | None | ERR552510_ERR552509 | MDR-TB | lineage2.2.1 | None | ERR551698 | MDR-TB | lineage2.2.1 | None | SAMEA2533389 | Pre-XDR-TB | lineage2.2.1 | uz | ERR552632 | MDR-TB | lineage2.2.1 | None | ERR551624 | MDR-TB | lineage2.2.1 | None | ERR551099 | MDR-TB | lineage2.2.1 | None | SAMEA2534056 | MDR-TB | lineage2.2.1 | uz | SAMEA2533463 | MDR-TB | lineage2.2.1 | uz | ERR3794388 | MDR-TB | lineage2.2.1 | None | SRR24710016 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2534699 | MDR-TB | lineage2.2.1 | uz | ERR551540 | MDR-TB | lineage2.2.1 | None | ERR13258444 | MDR-TB | lineage2.2.1 | None | SRR6824609 | MDR-TB | lineage2.2.2 | cn |
---|