lineage | Count |
---|---|
lineage4.7 | 7 |
lineage3 | 37 |
lineage2.2.1 | 64 |
lineage4.4.1.1.1 | 2 |
lineage4.3.3 | 7 |
10 | |
lineage1.1.1 | 1 |
lineage2.2.1.1 | 11 |
lineage4.4.1.1 | 2 |
lineage4.8 | 14 |
lineage2.2 | 1 |
lineage1.1.2 | 6 |
lineage3.1 | 3 |
lineage4.2.1 | 3 |
lineage4.1.1 | 1 |
lineage4.3.1 | 4 |
lineage3.1.2 | 4 |
lineage2.2.1.2 | 2 |
lineage3.1.2.1 | 3 |
lineage4.3.4.1 | 3 |
lineage4.1.2.1 | 4 |
lineage4.4.2 | 3 |
lineage4 | 5 |
lineage4.3.4.2 | 2 |
lineage4.5 | 1 |
lineage4.2.2 | 3 |
lineage2.2.2 | 5 |
lineage1.2.2.2 | 4 |
lineage4.6.1.1 | 3 |
lineage4.1.2 | 1 |
lineage4.2.2.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.8.1 | 1 |
lineage4.3.2 | 1 |
lineage4.2.2.2 | 1 |
lineage4.8;lineage2.2.1 | 1 |
lineage4.3.2.1 | 1 |
lineage1.2.1.1 | 1 |
lineage4.1.1.3 | 1 |
lineage3;lineage1.1.2 | 1 |
lineage3.1.1 | 1 |
lineage3;lineage1.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 228 |
ID | Drug resistance | Lineage | Country iso2 | ERR2864282 | MDR-TB | lineage4.7 | pt | ERR3335799 | Pre-XDR-TB | lineage3 | pk | SRR8651577 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1723619 | Pre-XDR-TB | lineage2.2.1 | cn | ERR552204 | Other | lineage4.7 | de | SAMN02403578 | Pre-XDR-TB | lineage4.4.1.1.1 | za | ERR4796503 | XDR-TB | lineage3 | in | ERR4813059 | MDR-TB | lineage4.3.3 | None | ERR3335725 | RR-TB | lineage3 | pk | SRR5485565 | RR-TB | None | SRR6824291 | Pre-XDR-TB | lineage2.2.1 | cn | ERR752114 | RR-TB | lineage1.1.1 | th | SRR6079924 | MDR-TB | lineage2.2.1.1 | au | SRR7341681 | MDR-TB | lineage4.4.1.1 | None | ERR4799202 | Pre-XDR-TB | lineage4.8 | in | ERR2510385 | Pre-XDR-TB | lineage3 | pk | SRR20969752 | MDR-TB | lineage2.2 | None | SRR15014722 | MDR-TB | lineage1.1.2 | None | SRR15014682 | MDR-TB | lineage4.8 | None | ERR4799965 | Pre-XDR-TB | lineage3.1 | in | SRR23310866 | MDR-TB | lineage4.2.1 | None | SRR23310948 | MDR-TB | lineage4.2.1 | None | ERR2516703 | MDR-TB | lineage4.1.1 | nl | ERR779851 | MDR-TB | lineage2.2.1 | pe | ERR2851365 | MDR-TB | lineage3 | lb | ERR4797828 | Pre-XDR-TB | lineage4.8 | in | ERR4830732 | MDR-TB | lineage4.3.1 | dz | SAMN02403579 | MDR-TB | lineage4.4.1.1.1 | za | ERR4797621 | Pre-XDR-TB | lineage2.2.1 | in | ERR2510311 | MDR-TB | lineage3 | pk | SRR671721 | MDR-TB | lineage2.2.1 | cn | SAMN02599131 | MDR-TB | lineage3 | None | SAMN03246429 | MDR-TB | lineage2.2.1.1 | cn | ERR3287435 | Pre-XDR-TB | lineage2.2.1 | pe | SRR2024959 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4797844 | Pre-XDR-TB | lineage3.1.2 | in | ERR038746 | MDR-TB | lineage2.2.1 | ug | SRR2024883 | MDR-TB | lineage2.2.1.2 | cn | ERR4799502 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR2024957 | MDR-TB | lineage2.2.1 | cn | ERR3335759 | MDR-TB | lineage3 | pk | ERR4797941 | Pre-XDR-TB | lineage3.1.2.1 | in | ERR108453 | Pre-XDR-TB | lineage2.2.1 | ru | SRR5485593 | MDR-TB | None | ERR1034657 | MDR-TB | lineage4.7 | bg | SRR5485590 | MDR-TB | None | SAMN02414892 | MDR-TB | lineage4.3.4.1 | se | ERR4796452 | Pre-XDR-TB | lineage3 | in | ERR4800079 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798756 | Pre-XDR-TB | lineage4.8 | in | ERR3335750 | Pre-XDR-TB | lineage3 | pk | ERR751546 | MDR-TB | lineage2.2.1 | pe | SAMN02414897 | MDR-TB | lineage4.3.4.1 | se | ERR4799472 | Pre-XDR-TB | lineage2.2.1 | in | SRR2024964 | MDR-TB | lineage2.2.1 | cn | ERR751486 | MDR-TB | lineage4.1.2.1 | pe | ERR4800205 | Pre-XDR-TB | lineage4.3.3 | in | ERR5918113 | Pre-XDR-TB | lineage2.2.1 | za | SRR2025000 | MDR-TB | lineage2.2.1.2 | cn | SRR671831 | MDR-TB | lineage4.4.2 | cn | ERR4828844 | Pre-XDR-TB | lineage4 | None | SRR6824377 | MDR-TB | lineage2.2.1.1 | cn | ERR3287755 | MDR-TB | lineage2.2.1 | pe | ERR3335777 | Pre-XDR-TB | lineage3 | pk | SRR5709938 | Pre-XDR-TB | lineage4.3.4.2 | th | SRR671850 | MDR-TB | lineage4.5 | cn | ERR4797221 | Pre-XDR-TB | lineage4.8 | in | ERR4829593 | Pre-XDR-TB | lineage3.1.2.1 | it | ERR4796605 | MDR-TB | lineage3.1.2.1 | in | ERR4810979 | Pre-XDR-TB | lineage4.2.2 | cn | ERR4800452 | Pre-XDR-TB | lineage2.2.1 | in | SRR2024904 | MDR-TB | lineage2.2.1 | cn | ERR2516578 | Pre-XDR-TB | lineage2.2.1 | pe | SRR5485403 | RR-TB | None | SRR1710076 | Pre-XDR-TB | lineage2.2.2 | cn | ERR4799095 | MDR-TB | lineage1.2.2.2 | in | SRR671824 | Pre-XDR-TB | lineage2.2.2 | cn | SRR1723441 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02398700 | Pre-XDR-TB | lineage2.2.1 | kr | SAMN02599035 | HR-TB | lineage1.1.2 | in | ERR6358867 | MDR-TB | lineage4.6.1.1 | None | ERR4799961 | XDR-TB | lineage4.8 | in | ERR4797963 | MDR-TB | lineage3 | in | SRR5485566 | MDR-TB | None | SRR2024972 | MDR-TB | lineage2.2.1 | cn | ERR229936 | MDR-TB | lineage2.2.1 | ru | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR4800413 | MDR-TB | lineage3 | in | ERR4829729 | Pre-XDR-TB | lineage4.7 | it | ERR751603 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4831603 | Pre-XDR-TB | lineage2.2.1.1 | vn | ERR4800544 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR6257026 | MDR-TB | lineage2.2.1 | None | ERR4829857 | MDR-TB | lineage2.2.1 | it | ERR2515590 | Pre-XDR-TB | lineage4.1.2 | za | ERR3335789 | Pre-XDR-TB | lineage3 | pk | ERR4799277 | Pre-XDR-TB | lineage4.8 | in | ERR4830734 | MDR-TB | lineage4.3.1 | dz | ERR2516843 | MDR-TB | lineage2.2.1 | gb | SRR8651602 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4799075 | MDR-TB | lineage1.2.2.2 | in | ERR4796863 | Pre-XDR-TB | lineage3.1.2 | in | SRR5266559 | MDR-TB | lineage2.2.1 | ru | ERR2510842 | MDR-TB | lineage4.2.2.1 | it | ERR718534 | HR-TB | lineage1.2.1.2.1 | th | SAMN02360621 | Pre-XDR-TB | lineage2.2.1 | kr | ERR3335747 | Pre-XDR-TB | lineage4 | pk | ERR4798750 | Pre-XDR-TB | lineage3 | in | ERR4799563 | Pre-XDR-TB | lineage1.1.2 | in | SRR1723730 | MDR-TB | lineage2.2.1 | cn | ERR2516890 | MDR-TB | lineage3 | gb | ERR7911123 | MDR-TB | lineage2.2.2 | vn | ERR4800074 | MDR-TB | lineage1.2.2.2 | in | ERR067586 | HR-TB | lineage2.2.1 | ru | SRR8651574 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2516572 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR2510485 | MDR-TB | lineage3 | pk | ERR2510199 | MDR-TB | lineage2.2.1 | pe | ERR4830932 | Pre-XDR-TB | lineage2.2.1 | np | ERR1034613 | Pre-XDR-TB | lineage3 | pk | ERR4797738 | Pre-XDR-TB | lineage4.3.3 | in | SRR5485562 | MDR-TB | None | ERR751558 | MDR-TB | lineage4.1.2.1 | pe | ERR1465929 | MDR-TB | lineage4.8 | do | SRR2024996 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02360549 | Pre-XDR-TB | lineage2.2.1 | kr | ERR2510834 | MDR-TB | lineage2.2.1 | it | ERR3335776 | Pre-XDR-TB | lineage3 | pk | ERR4797587 | Pre-XDR-TB | lineage4.2.2 | in | ERR7911432 | MDR-TB | lineage4.8.1 | za | ERR4796491 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4812872 | Pre-XDR-TB | lineage4.3.2 | None | ERR3287713 | MDR-TB | lineage2.2.1 | pe | SAMN02360548 | Pre-XDR-TB | lineage2.2.1 | kr | ERR3287587 | MDR-TB | lineage2.2.1 | None | ERR553056 | Other | lineage4.7 | de | ERR2864274 | MDR-TB | lineage4.7 | pt | SRR6824687 | MDR-TB | lineage2.2.1 | cn | ERR1035155 | MDR-TB | lineage4.2.2.2 | sa | SAMN02414990 | MDR-TB | lineage3.1 | se | ERR4811355 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2515436 | RR-TB | lineage2.2.1 | None | ERR3335792 | Pre-XDR-TB | lineage3 | pk | ERR4799691 | MDR-TB | lineage3 | in | SRR5485404 | MDR-TB | None | ERR4829954 | Pre-XDR-TB | lineage1.1.2 | None | ERR4799849 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | in | ERR4813038 | MDR-TB | lineage4.1.2.1 | pe | ERR2516024 | MDR-TB | lineage2.2.1 | za | SAMEA2533547 | MDR-TB | lineage2.2.1 | uz | ERR4798747 | MDR-TB | lineage4.8 | in | ERR1193880 | Pre-XDR-TB | lineage4.3.2.1 | za | ERR4797993 | HR-TB | lineage1.2.2.2 | in | ERR4796594 | Pre-XDR-TB | lineage3 | in | ERR4798805 | Pre-XDR-TB | lineage4.8 | in | ERR4811353 | Pre-XDR-TB | lineage4.4.2 | cn | ERR4813388 | MDR-TB | lineage4.1.2.1 | pe | ERR400431 | Other | lineage1.2.1.1 | gb | ERR2515154 | Other | lineage4.1.1.3 | None | SAMN02599130 | MDR-TB | lineage3 | None | ERR2516871 | Pre-XDR-TB | lineage3 | gb | SRR671727 | MDR-TB | lineage2.2.1 | cn | ERR4798704 | MDR-TB | lineage3 | in | ERR4797937 | Pre-XDR-TB | lineage3 | in | ERR4829129 | HR-TB | lineage3.1 | None | ERR2510599 | MDR-TB | lineage4.8 | None | SRR7341699 | MDR-TB | lineage4.4.1.1 | ro | ERR4797100 | MDR-TB | lineage3;lineage1.1.2 | in | ERR7911163 | MDR-TB | lineage2.2.1 | vn | ERR4828221 | MDR-TB | lineage2.2.1.1 | None | ERR144635 | MDR-TB | lineage2.2.1 | ru | ERR4811313 | MDR-TB | lineage4.2.2 | cn | ERR4797223 | Pre-XDR-TB | lineage3.1.2 | in | ERR551159 | MDR-TB | lineage2.2.1 | uz | ERR1193723 | HR-TB | lineage4.3.3 | mx | ERR4811315 | MDR-TB | lineage2.2.1 | cn | ERR6358864 | MDR-TB | lineage4.6.1.1 | None | SRR671760 | Pre-XDR-TB | lineage4.4.2 | cn | ERR4819109 | Pre-XDR-TB | lineage4 | gb | ERR4798666 | Pre-XDR-TB | lineage2.2.1 | in | SRR5709906 | MDR-TB | lineage2.2.2 | th | ERR4798531 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798296 | Pre-XDR-TB | lineage4.8 | in | ERR4797133 | MDR-TB | lineage1.1.2 | in | ERR4830844 | MDR-TB | lineage3.1.1 | et | ERR4800467 | Pre-XDR-TB | lineage4.8 | in | ERR6359002 | MDR-TB | lineage2.2.1 | None | ERR4813194 | MDR-TB | lineage4.3.3 | pe | ERR1036287 | MDR-TB | lineage2.2.1 | pt | ERR2516839 | Pre-XDR-TB | lineage3 | gb | SRR5485607 | RR-TB | None | SRR5485549 | RR-TB | None | ERR4797246 | Pre-XDR-TB | lineage3 | in | ERR2516576 | MDR-TB | lineage4 | pe | ERR2510883 | Pre-XDR-TB | lineage3 | pk | SAMN02360622 | Pre-XDR-TB | lineage2.2.1 | kr | SRR6824379 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4797074 | Pre-XDR-TB | lineage4.8 | in | ERR2510243 | MDR-TB | lineage3.1.2 | pk | ERR6358710 | MDR-TB | lineage4.6.1.1 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911476 | MDR-TB | lineage2.2.2 | vn | ERR4830672 | MDR-TB | lineage4.3.1 | dz | ERR7911726 | Pre-XDR-TB | lineage2.2.1 | us | SRR5485554 | MDR-TB | None | SAMN02599061 | MDR-TB | lineage3 | None | ERR3335734 | Pre-XDR-TB | lineage4 | pk | ERR7911335 | MDR-TB | lineage2.2.1 | us | SAMN02414960 | MDR-TB | lineage4.3.4.1 | se | ERR2510473 | MDR-TB | lineage3 | pk | ERR4797510 | Pre-XDR-TB | lineage2.2.1 | in | ERR2517081 | MDR-TB | lineage3 | gb | ERR4813068 | MDR-TB | lineage4.3.3 | pe | ERR2516549 | Pre-XDR-TB | lineage3 | nl | ERR400413 | Other | lineage3 | gb | ERR4829937 | Pre-XDR-TB | lineage3 | pk | SAMEA2533805 | MDR-TB | lineage2.2.1 | uz | ERR4799668 | Pre-XDR-TB | lineage3 | in | ERR2510538 | Pre-XDR-TB | lineage4.2.1 | pk | ERR6358850 | MDR-TB | lineage4.7 | None | ERR7911410 | MDR-TB | lineage2.2.1 | us | ERR4830722 | Pre-XDR-TB | lineage4.3.1 | dz | ERR4798336 | Pre-XDR-TB | lineage3;lineage1.2.2.2 | in | ERR234629 | MDR-TB | lineage2.2.1 | ru | ERR2510478 | Pre-XDR-TB | lineage3 | pk | ERR4799930 | Pre-XDR-TB | lineage1.1.2 | in | ERR2516208 | MDR-TB | lineage4.3.3 | be | SRR8380862 | MDR-TB | lineage2.2.1.1 | in |
---|