lineage | Count |
---|---|
lineage4.8 | 14 |
lineage2.2.1 | 37 |
lineage4.7 | 4 |
lineage1.1.2 | 6 |
lineage4.1.2.1 | 22 |
lineage3 | 9 |
lineage2.1 | 1 |
lineage5.1.1 | 1 |
lineage4.1.1 | 1 |
lineage3.1.1 | 1 |
lineage4.5 | 3 |
lineage4.1.4 | 2 |
lineage4.4.1.1 | 7 |
lineage1.2.1.2.1 | 1 |
lineage4.2.1 | 6 |
lineage4.2.2.1 | 1 |
lineage4.2 | 2 |
lineage4.3.1 | 3 |
1 | |
lineage4.1.1.3 | 2 |
lineage3.1 | 1 |
lineage1.1.3.1 | 1 |
lineage1.2.2.2 | 2 |
lineage4.6.2.2 | 1 |
lineage4.1.2 | 5 |
lineage4.9 | 5 |
lineage4.8.1 | 1 |
lineage4.3.2.1 | 2 |
lineage4.3.3 | 4 |
lineage4.8;lineage2.2.1 | 1 |
lineage4 | 1 |
lineage4.3.4.1 | 2 |
lineage6 | 1 |
lineage4.3.2 | 1 |
lineage4.3.4.2 | 1 |
lineage2.2 | 1 |
lineage4.6 | 1 |
spoligotype | Count |
---|---|
None | 155 |
ID | Drug resistance | Lineage | Country iso2 | SRR7516415 | Sensitive | lineage4.8 | None | SRR7516447 | Sensitive | lineage2.2.1 | None | ERR10465777 | Sensitive | lineage4.7 | None | ERR10465996 | Sensitive | lineage1.1.2 | None | ERR10465760 | Sensitive | lineage4.1.2.1 | None | ERR10465956 | Sensitive | lineage3 | None | ERR11043101 | Sensitive | lineage2.1 | None | ERR10680073 | MDR-TB | lineage4.8 | None | ERR10849242 | Sensitive | lineage4.8 | None | ERR11043353 | Sensitive | lineage4.8 | None | ERR11043289 | Sensitive | lineage5.1.1 | None | ERR11043377 | Sensitive | lineage4.1.1 | None | ERR11043358 | Sensitive | lineage3.1.1 | None | ERR11043703 | Sensitive | lineage2.2.1 | None | ERR11043676 | Other | lineage3 | None | ERR11043563 | Sensitive | lineage4.5 | None | ERR11044307 | Sensitive | lineage4.7 | None | ERR11043919 | Sensitive | lineage4.1.4 | None | ERR11044179 | HR-TB | lineage4.4.1.1 | None | ERR4553483 | MDR-TB | lineage2.2.1 | None | ERR11044418 | Sensitive | lineage4.1.4 | None | ERR11044436 | Sensitive | lineage1.2.1.2.1 | None | ERR11044445 | Pre-XDR-TB | lineage4.2.1 | None | ERR11044622 | MDR-TB | lineage2.2.1 | None | ERR11044684 | Sensitive | lineage4.2.2.1 | None | ERR4276898 | MDR-TB | lineage4.2 | None | ERR11044404 | Sensitive | lineage2.2.1 | None | ERR11044440 | HR-TB | lineage4.1.2.1 | None | ERR3794379 | MDR-TB | lineage2.2.1 | None | ERR4383956 | Sensitive | lineage4.3.1 | None | ERR4796734 | Pre-XDR-TB | lineage2.2.1 | in | ERR4553882 | Pre-XDR-TB | None | ERR4796733 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR4796601 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796741 | Sensitive | lineage3.1 | in | ERR4796767 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798445 | Sensitive | lineage1.1.3.1 | None | ERR4796766 | Sensitive | lineage1.1.2 | in | ERR4796839 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796861 | MDR-TB | lineage2.2.1 | in | ERR4797214 | HR-TB | lineage1.1.2 | in | ERR4797841 | HR-TB | lineage2.2.1 | None | ERR4799172 | Pre-XDR-TB | lineage4.8 | in | ERR4798458 | Sensitive | lineage1.2.2.2 | in | ERR4798476 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799200 | HR-TB | lineage4.6.2.2 | in | ERR4799255 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799250 | Sensitive | lineage1.1.2 | in | ERR4799266 | Sensitive | lineage3 | in | ERR4800660 | Pre-XDR-TB | lineage4.1.2 | None | ERR4800559 | Sensitive | lineage4.1.1.3 | None | ERR4800590 | MDR-TB | lineage1.2.2.2 | in | ERR4800684 | Pre-XDR-TB | lineage2.2.1 | None | ERR5979611 | Sensitive | lineage4.9 | None | ERR5979615 | Sensitive | lineage4.9 | None | ERR7737873 | RR-TB | lineage4.8.1 | None | ERR5979674 | Sensitive | lineage4.9 | None | ERR7737733 | MDR-TB | lineage4.3.2.1 | None | ERR5979649 | Other | lineage4.9 | None | ERR7902749 | Sensitive | lineage1.1.2 | None | ERR7902667 | HR-TB | lineage1.1.2 | None | SRR10809191 | Sensitive | lineage2.2.1 | None | SRR10397222 | MDR-TB | lineage2.2.1 | None | SRR10809148 | Sensitive | lineage4.3.3 | None | ERR9907672 | MDR-TB | lineage4.4.1.1 | None | SRR10379961 | Sensitive | lineage4.8 | None | SRR10380050 | MDR-TB | lineage2.2.1 | None | SRR10380073 | MDR-TB | lineage4.2.1 | None | SRR10380243 | MDR-TB | lineage2.2.1 | None | SRR10851727 | Sensitive | lineage4.1.2.1 | None | SRR13232472 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050309 | Sensitive | lineage3 | None | SRR10869051 | HR-TB | lineage2.2.1 | None | SRR13232533 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232484 | MDR-TB | lineage2.2.1 | None | SRR14088367 | MDR-TB | lineage3 | None | SRR13232636 | Pre-XDR-TB | lineage2.2.1 | None | SRR14164570 | HR-TB | lineage4.4.1.1 | None | SRR14164696 | Sensitive | lineage4.1.2.1 | None | SRR14165015 | Sensitive | lineage4.8 | None | SRR14164782 | Other | lineage4.1.2.1 | None | SRR14165024 | Other | lineage4.1.2.1 | None | SRR14520098 | HR-TB | lineage4.5 | None | SRR14519724 | Sensitive | lineage4.9 | None | SRR14782336 | Sensitive | lineage4.8;lineage2.2.1 | None | SRR14782150 | MDR-TB | lineage4.2.1 | None | SRR22528520 | MDR-TB | lineage4.3.3 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None | SRR21239917 | Sensitive | lineage4.1.2.1 | None | SRR21240153 | HR-TB | lineage4.4.1.1 | None | SRR21677862 | Other | lineage4 | None | SRR14782409 | Sensitive | lineage4.3.4.1 | None | SRR14807541 | MDR-TB | lineage2.2.1 | None | SRR14807563 | MDR-TB | lineage2.2.1 | None | SRR21240191 | Sensitive | lineage4.1.2.1 | None | ERR11069096 | Sensitive | lineage4.1.2.1 | None | ERR11068956 | Sensitive | lineage4.1.2.1 | None | ERR11081371 | MDR-TB | lineage2.2.1 | None | ERR11080846 | Sensitive | lineage4.1.2.1 | None | ERR11081283 | Sensitive | lineage4.8 | None | ERR11081718 | Sensitive | lineage6 | None | ERR11081754 | HR-TB | lineage4.4.1.1 | None | ERR11081863 | Sensitive | lineage4.1.2.1 | None | ERR11081820 | Sensitive | lineage4.7 | None | ERR11081771 | MDR-TB | lineage4.2.1 | None | ERR11081772 | Sensitive | lineage4.3.2 | None | ERR11081961 | Sensitive | lineage4.1.2.1 | None | ERR11082062 | Sensitive | lineage4.1.2 | None | ERR11082032 | Sensitive | lineage3 | None | ERR11082046 | Sensitive | lineage4.7 | None | ERR11082946 | Sensitive | lineage4.1.2.1 | None | ERR11082407 | MDR-TB | lineage4.2.1 | None | ERR11082585 | MDR-TB | lineage4.8 | None | ERR11082571 | Sensitive | lineage4.1.2.1 | None | ERR11082723 | Sensitive | lineage4.3.4.2 | None | ERR11082904 | Sensitive | lineage4.1.2.1 | None | SRR4037537 | Sensitive | lineage4.3.2.1 | za | SRR23861790 | MDR-TB | lineage2.2.1 | None | ERR11083003 | HR-TB | lineage4.3.4.1 | None | ERR11083150 | Other | lineage4.1.2 | None | SRR6207281 | Pre-XDR-TB | lineage2.2 | None | ERR4822588 | Pre-XDR-TB | lineage2.2.1 | tm | ERR2512846 | Sensitive | lineage4.1.2.1 | None | ERR4822445 | Sensitive | lineage4.8 | None | ERR4827689 | Sensitive | lineage2.2.1 | None | ERR4822514 | Sensitive | lineage4.1.2.1 | de | ERR4822573 | HR-TB | lineage4.3.3 | tm | ERR4822578 | Sensitive | lineage4.8 | tm | ERR4822611 | Other | lineage4.4.1.1 | de | ERR4829151 | MDR-TB | lineage4.3.1 | ng | ERR4827495 | Sensitive | lineage2.2.1 | None | ERR2843497 | MDR-TB | lineage2.2.1 | None | ERR4827484 | Sensitive | lineage2.2.1 | None | ERR4827804 | HR-TB | lineage4.6 | None | ERR4822330 | MDR-TB | lineage4.2 | de | ERR4827577 | MDR-TB | lineage2.2.1 | None | ERR4829689 | RR-TB | lineage4.1.2.1 | it | ERR4828360 | MDR-TB | lineage2.2.1 | vn | ERR4828886 | HR-TB | lineage4.1.2 | None | ERR4828869 | RR-TB | lineage4.8 | None | ERR4828882 | Sensitive | lineage4.1.2.1 | None | ERR4831406 | Sensitive | lineage4.2.1 | de | ERR4831111 | Sensitive | lineage4.8 | de | ERR4831157 | Sensitive | lineage4.3.1 | de | ERR4831161 | Sensitive | lineage3 | de | ERR4831415 | Sensitive | lineage4.1.2.1 | de | ERR3148045 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4831025 | Pre-XDR-TB | lineage3 | np | ERR4831143 | Sensitive | lineage4.5 | de | ERR4831373 | Sensitive | lineage2.2.1 | de | ERR4831305 | Other | lineage4.1.2 | de | ERR4831267 | Sensitive | lineage4.1.2.1 | None | SRR6807703 | MDR-TB | lineage2.2.1 | None | ERR4831381 | Sensitive | lineage4.3.3 | de | SRR6807752 | Sensitive | lineage4.8 | None |
---|