lineage | Count |
---|---|
lineage4.3.3 | 4 |
lineage4.9 | 4 |
lineage4 | 3 |
lineage4.1.2 | 2 |
lineage4.6.1 | 2 |
lineage6;lineage5.1;lineage4.2.2;lineage1.1.3.1;lineage1.1.1 | 1 |
8 | |
lineage4.1.1 | 3 |
lineage3 | 17 |
La1.8.1 | 13 |
lineage3.1.2 | 3 |
lineage4.4.1.1 | 1 |
lineage1.2.2.1 | 1 |
lineage4.8 | 1 |
lineage4.1.2.1 | 4 |
lineage4.1.1.3 | 1 |
La1.7.1 | 5 |
lineage4.8.2 | 1 |
lineage4.4.2 | 1 |
lineage7 | 3 |
lineage1.1.1 | 1 |
lineage4.5 | 1 |
lineage2.2.1.1 | 1 |
lineage2.2.1 | 2 |
lineage4.6.2.2 | 1 |
lineage4.3.4.2.1 | 3 |
lineage3.1.1 | 1 |
lineage1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 89 |
ID | Drug resistance | Lineage | Country iso2 | SRR857295 | MDR-TB | lineage4.3.3 | None | SRR6044780 | Other | lineage4.9 | None | SRR857281 | MDR-TB | lineage4.3.3 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR857286 | MDR-TB | lineage4.3.3 | None | SRR857294 | MDR-TB | lineage4.3.3 | None | ERR028330 | Sensitive | lineage4.6.1 | None | ERR028317 | Sensitive | lineage6;lineage5.1;lineage4.2.2;lineage1.1.3.1;lineage1.1.1 | None | ERR323039 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR027457 | HR-TB | lineage4.9 | None | ERR046740 | Sensitive | lineage4.1.1 | None | ERR046731 | Sensitive | lineage4.1.1 | None | ERR046803 | Sensitive | lineage3 | None | ERR046750 | Other | La1.8.1 | None | ERR046774 | Other | La1.8.1 | None | ERR046810 | Sensitive | lineage3.1.2 | None | ERR046742 | Sensitive | lineage4.1.1 | None | ERR046805 | Sensitive | lineage3 | None | ERR046806 | Sensitive | lineage3 | None | ERR046812 | Sensitive | lineage3 | None | ERR046813 | Sensitive | lineage3 | None | ERR046811 | Sensitive | lineage3 | None | ERR046804 | Sensitive | lineage3 | None | ERR046809 | Sensitive | lineage3 | None | ERR046816 | Other | lineage3.1.2 | None | ERR046808 | Sensitive | lineage3 | None | ERR046814 | Sensitive | lineage3 | None | ERR046817 | Sensitive | lineage4.9 | None | ERR046828 | Sensitive | lineage3 | None | ERR046826 | Sensitive | lineage3 | None | ERR046818 | Sensitive | lineage3.1.2 | None | ERR046829 | Sensitive | lineage3 | None | ERR3283024 | Other | None | ERR046835 | Sensitive | lineage4.4.1.1 | None | ERR046886 | Sensitive | lineage1.2.2.1 | None | ERR046899 | Sensitive | lineage4.8 | None | ERR046973 | Sensitive | lineage4.1.2.1 | None | ERR1034652 | Other | None | ERR046902 | Sensitive | lineage4.1.1.3 | None | ERR046955 | Sensitive | lineage4.1.2.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797014 | Other | None | SRR1791780 | Other | La1.8.1 | None | SRR1791708 | Other | La1.7.1 | None | SRR1791865 | Other | La1.8.1 | None | SRR1791907 | Other | La1.8.1 | None | SRR1792002 | Other | La1.7.1 | None | SRR1791995 | Other | La1.8.1 | None | SRR1792282 | Other | La1.8.1 | None | SRR1792059 | Other | La1.8.1 | None | SRR1792124 | Other | La1.8.1 | None | SRR1792042 | Other | La1.8.1 | None | SRR1792089 | Other | La1.8.1 | None | SRR1792486 | Other | La1.7.1 | None | SRR1792499 | Other | La1.7.1 | None | SRR18213841 | Sensitive | lineage4.8.2 | None | SRR1792506 | Other | La1.8.1 | None | SRR2467264 | Sensitive | lineage4.4.2 | None | SRR6650235 | Other | lineage3 | None | SRR6650302 | Sensitive | lineage3 | None | ERR1200618 | Sensitive | lineage7 | None | ERR233363 | Sensitive | lineage1.1.1 | None | SRR4019487 | Other | La1.8.1 | None | ERR233346 | Sensitive | lineage7 | None | ERR212034 | HR-TB | None | SRR1723905_SRR1723904 | MDR-TB | lineage4.5 | None | ERR1200603 | Sensitive | lineage7 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | SRR1723693_SRR1723694 | RR-TB | lineage2.2.1.1 | None | ERR234105 | Other | lineage2.2.1 | None | SRR4019491 | Other | La1.7.1 | None | ERR234127 | Sensitive | lineage2.2.1 | None | ERR234153 | Sensitive | lineage3 | None | ERR234159 | Sensitive | lineage4.6.2.2 | None | ERR234178 | Sensitive | lineage3 | None | ERR234212 | Sensitive | lineage4.9 | None | ERR245824 | Sensitive | lineage4.3.4.2.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | ERR245815 | Sensitive | lineage4.3.4.2.1 | None | ERR245819 | Other | lineage3.1.1 | None | ERR245821 | Other | lineage4.3.4.2.1 | None | ERR1035138 | MDR-TB | None | ERR245825 | Sensitive | lineage1.1.3 | None | ERR2693230 | Other | None | ERR233352 | Sensitive | lineage4.1.2.1 | None | ERR1200628 | Sensitive | lineage4.1.2.1 | None | ERR2693231 | Other | None |
---|