lineage | Count |
---|---|
lineage2.2 | 4 |
lineage4.5 | 3 |
1 | |
lineage4.1.2.1 | 2 |
lineage2.2.1 | 32 |
lineage4.2.2.2 | 3 |
lineage4.3.3 | 5 |
lineage4.5;lineage2.2.1 | 1 |
lineage2.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.8 | 1 |
lineage4.6.1.2 | 1 |
lineage4.6.1.1 | 1 |
lineage3.1.2 | 1 |
lineage1.1.2 | 1 |
lineage4.2.1;lineage2.2.1 | 3 |
spoligotype | Count |
---|---|
None | 61 |
ID | Drug resistance | Lineage | Country iso2 | SRR23310894 | MDR-TB | lineage2.2 | None | ERR2179645 | Sensitive | lineage4.5 | cn | ERR4820833 | HR-TB | None | SRR23310867 | MDR-TB | lineage2.2 | None | ERR4821569 | MDR-TB | lineage4.1.2.1 | None | SRR23310958 | MDR-TB | lineage2.2 | None | SRR23310909 | MDR-TB | lineage2.2 | None | ERR4827528 | MDR-TB | lineage2.2.1 | None | SRR6832503 | HR-TB | lineage2.2.1 | None | ERR4829092 | MDR-TB | lineage4.2.2.2 | dj | ERR552582 | HR-TB | lineage2.2.1 | de | ERR4829096 | MDR-TB | lineage4.2.2.2 | dj | SAMEA2534521 | MDR-TB | lineage4.3.3 | None | SRR6824677 | MDR-TB | lineage2.2.1 | cn | SRR1723914 | Sensitive | lineage4.5 | cn | SRR6824707 | MDR-TB | lineage4.5;lineage2.2.1 | cn | ERR1035097 | Pre-XDR-TB | lineage2.1 | vn | SRR8380043 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043427 | MDR-TB | lineage4.3.3 | None | ERR10762364 | MDR-TB | lineage2.2.1 | None | ERR10762393 | MDR-TB | lineage2.2.1 | None | ERR10762430 | MDR-TB | lineage2.2.1 | None | ERR11043181 | MDR-TB | lineage2.2.1 | None | ERR1035338 | MDR-TB | lineage4.1.1.3 | br | ERR10762259 | MDR-TB | lineage2.2.1 | None | ERR3794415 | MDR-TB | lineage2.2.1 | None | ERR11044649 | MDR-TB | lineage4.8 | None | ERR1199097 | MDR-TB | lineage4.6.1.2 | ug | ERR11044662 | Pre-XDR-TB | lineage2.2.1 | None | ERR1193875 | MDR-TB | lineage4.3.3 | sl | ERR1213878 | MDR-TB | lineage4.6.1.1 | de | ERR3794531 | HR-TB | lineage2.2.1 | None | ERR4553828 | MDR-TB | lineage2.2.1 | None | ERR6397200 | MDR-TB | lineage4.2.2.2 | None | ERR4796355 | Pre-XDR-TB | lineage3.1.2 | in | ERR4800218 | MDR-TB | lineage1.1.2 | in | ERR7910976 | MDR-TB | lineage2.2.1 | md | ERR7910968 | MDR-TB | lineage2.2.1 | md | SRR10380170 | MDR-TB | lineage2.2.1 | None | SRR10380136 | MDR-TB | lineage2.2.1 | None | ERR7910978 | MDR-TB | lineage2.2.1 | md | ERR7911052 | MDR-TB | lineage2.2.1 | md | SRR10380164 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR14781957 | MDR-TB | lineage2.2.1 | None | SRR10380196 | MDR-TB | lineage2.2.1 | None | SRR10430370 | MDR-TB | lineage2.2.1 | None | SRR1168966 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR1166148 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR13232407 | MDR-TB | lineage2.2.1 | None | SRR23938611 | HR-TB | lineage2.2.1 | None | SRR14782030 | MDR-TB | lineage2.2.1 | None | SRR14782802 | MDR-TB | lineage2.2.1 | None | SRR14801510 | MDR-TB | lineage2.2.1 | None | SRR16370442 | MDR-TB | lineage4.1.2.1 | None | SRR21576564 | MDR-TB | lineage4.5 | None | SRR14801505 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802230 | MDR-TB | lineage2.2.1 | None | SRR14807524 | MDR-TB | lineage2.2.1 | None | ERR552259 | MDR-TB | lineage4.3.3 | None | ERR552260 | MDR-TB | lineage4.3.3 | None | SAMN03246286 | MDR-TB | lineage2.2.1 | cn |
---|