Rv3795 - p.Tyr319Cys
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
6 RR-TB
7 HR-TB
127 MDR-TB
80 Pre-XDR-TB
3 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage4.1.2 | 1 |
| lineage2.2.1 | 192 |
| lineage3 | 2 |
| lineage4.4.1.1.1;lineage4.8 | 1 |
| lineage1.2.1.2.1 | 4 |
| lineage2.2.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.5 | 2 |
| lineage4.2.2 | 4 |
| lineage4.3.3 | 3 |
| lineage1.1.2;lineage3 | 1 |
| lineage4.3.2 | 1 |
| lineage2.1 | 1 |
| lineage4.2.1 | 2 |
| lineage1.1.1 | 1 |
| lineage4.8 | 1 |
| lineage2.2.1;lineage4.7 | 1 |
| lineage3.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.2.2.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 226 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13266225 | MDR-TB | lineage2.2.1;lineage4.1.2 | None | ERR552434_ERR552433 | MDR-TB | lineage2.2.1 | None | SRR15901694 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539029 | MDR-TB | lineage2.2.1 | None | SRR29539332 | MDR-TB | lineage2.2.1 | None | SRR24256190 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207161 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256052 | MDR-TB | lineage2.2.1 | None | SRR29539095 | RR-TB | lineage2.2.1 | None | ERR13278951 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681458 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207234 | Pre-XDR-TB | lineage2.2.1 | None | ERR2307469 | MDR-TB | lineage2.2.1 | None | SRR24255915 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829974 | MDR-TB | lineage3 | pk | SRR6832551 | MDR-TB | lineage2.2.1 | None | SRR10315728 | MDR-TB | lineage4.4.1.1.1;lineage4.8 | None | SRR12420780 | MDR-TB | lineage2.2.1 | None | ERR5865489 | MDR-TB | lineage2.2.1 | None | SRR6832564 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866414 | MDR-TB | lineage2.2.1 | None | ERR5866141 | Pre-XDR-TB | lineage2.2.1 | None | SRR7829579 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822325 | Pre-XDR-TB | lineage2.2.1 | de | SRR28239542 | MDR-TB | lineage2.2.1 | None | ERR2600510 | MDR-TB | lineage2.2.1 | None | ERR11775978 | MDR-TB | lineage1.2.1.2.1 | None | SRR6832777 | MDR-TB | lineage2.2.1 | None | SRR29539592 | MDR-TB | lineage2.2.1 | None | ERR13191063 | MDR-TB | lineage2.2.2 | None | SRR29093950 | Pre-XDR-TB | lineage2.2.2 | None | SRR671799 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810953 | MDR-TB | lineage2.2.1 | cn | ERR4822302 | Pre-XDR-TB | lineage2.2.1 | de | ERR4828787 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024971 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4829067 | MDR-TB | lineage2.2.1 | ng | ERR2707202 | MDR-TB | lineage4.3.4.2.1 | cd | ERR4828702 | MDR-TB | lineage2.2.1 | vn | ERR751552 | XDR-TB | lineage2.2.1 | pe | ERR2600509 | MDR-TB | lineage2.2.1 | None | ERR7975655 | MDR-TB | lineage2.2.1 | None | ERR2307368 | MDR-TB | lineage2.2.1 | None | SRR6485041 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR5865901 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715070 | MDR-TB | lineage2.2.1 | None | SRR18715285 | Pre-XDR-TB | lineage2.2.1 | None | ERR1213839 | RR-TB | lineage4.5 | kr | SRR28239611 | MDR-TB | lineage2.2.1 | None | ERR5866089 | MDR-TB | lineage2.2.1 | None | SRR18715203 | MDR-TB | lineage2.2.1 | None | ERR3132291 | RR-TB | lineage4.5 | None | SRR21576572 | MDR-TB | lineage2.2.1 | None | ERR5865726 | MDR-TB | lineage2.2.1 | None | ERR2510254 | Pre-XDR-TB | lineage2.2.1 | it | SRR3085248 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256375 | MDR-TB | lineage2.2.1 | None | ERR13284581 | MDR-TB | lineage2.2.1 | None | SRR29539205 | MDR-TB | lineage2.2.1 | None | SRR24256299 | MDR-TB | lineage2.2.1 | None | ERR13292315 | Pre-XDR-TB | lineage4.2.2 | None | SRR30180266 | MDR-TB | lineage2.2.1 | None | SRR29539056 | MDR-TB | lineage2.2.1 | None | SRR29539510 | MDR-TB | lineage2.2.1 | None | SRR16115071 | Pre-XDR-TB | lineage4.2.2 | None | SRR29539161 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257051 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681219 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829040 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866095 | XDR-TB | lineage2.2.1 | None | SRR29539014 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539129 | Pre-XDR-TB | lineage2.2.1 | None | SRR29080976 | HR-TB | lineage1.2.1.2.1 | None | ERR11083014 | Pre-XDR-TB | lineage2.2.1 | None | SRR18911561 | Pre-XDR-TB | lineage4.2.2 | None | SRR5153310 | MDR-TB | lineage2.2.1 | None | SRR29231829 | MDR-TB | lineage4.3.4.2.1 | None | SRR16088577 | MDR-TB | lineage2.2.1 | None | SRR29539540 | MDR-TB | lineage2.2.1 | None | ERR4178141 | Other | lineage4.3.3 | None | ERR13284301 | MDR-TB | lineage2.2.1 | None | ERR13290970 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088583 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256263 | MDR-TB | lineage2.2.1 | None | SRR6964556 | RR-TB | lineage1.1.2;lineage3 | None | SRR6964574 | MDR-TB | lineage3 | None | ERR5866413 | MDR-TB | lineage2.2.1 | None | SRR13180199 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516422 | MDR-TB | lineage2.2.1 | None | SRR6832428 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539330 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822555 | MDR-TB | lineage2.2.1 | ua | SRR29385434 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088417 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206877 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393353 | MDR-TB | lineage4.3.2 | None | SRR24255977 | MDR-TB | lineage2.2.1 | None | SRR28394169 | MDR-TB | lineage2.2.1 | None | ERR4810484 | MDR-TB | lineage2.2.1 | cn | ERR4831637 | MDR-TB | lineage2.1 | vn | ERR751522 | MDR-TB | lineage2.2.1 | pe | ERR234616 | HR-TB | lineage4.2.1 | ru | ERR2677390 | Pre-XDR-TB | lineage2.2.1 | de | ERR2516438 | MDR-TB | lineage2.2.1 | nl | ERR2510185 | MDR-TB | lineage2.2.1 | pe | SRR29539638 | RR-TB | lineage2.2.1 | None | SRR6832740 | MDR-TB | lineage2.2.1 | None | ERR2600530 | MDR-TB | lineage2.2.1 | None | SRR28239538 | MDR-TB | lineage2.2.1 | None | ERR5866140 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539412 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832288 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865488 | MDR-TB | lineage2.2.1 | None | SRR16087907 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832769 | MDR-TB | lineage2.2.1 | None | SRR18715400 | MDR-TB | lineage2.2.1 | None | SRR24256176 | MDR-TB | lineage2.2.1 | None | SRR16088350 | MDR-TB | lineage2.2.1 | None | SRR28393271 | MDR-TB | lineage2.2.1 | None | SRR28239883 | MDR-TB | lineage2.2.1 | None | SRR6832250 | MDR-TB | lineage2.2.1 | None | SRR24256098 | MDR-TB | lineage2.2.1 | None | SRR24827283 | Pre-XDR-TB | lineage4.2.2 | None | SRR18002900 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831297 | MDR-TB | lineage2.2.1 | de | ERR3287381 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4829068 | MDR-TB | lineage2.2.1 | ng | SRR11972209 | RR-TB | lineage1.1.1 | None | ERR4829386 | Pre-XDR-TB | lineage2.2.1 | it | ERR5865900 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068853 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865725 | MDR-TB | lineage2.2.1 | None | SRR5153214 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832166 | MDR-TB | lineage2.2.1 | None | SRR24827314 | MDR-TB | lineage2.2.1 | None | SRR21576692 | MDR-TB | lineage1.2.1.2.1 | None | SRR15901693 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539025 | MDR-TB | lineage2.2.1 | None | ERR11043921 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832362 | MDR-TB | lineage2.2.1 | None | ERR13289431 | MDR-TB | lineage2.2.1 | None | SRR29539235 | MDR-TB | lineage2.2.1 | None | ERR10219878 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782630 | HR-TB | lineage2.2.1 | None | ERR8773975 | HR-TB | lineage4.8 | None | ERR11082273 | MDR-TB | lineage2.2.1;lineage4.7 | None | SRR29681490 | MDR-TB | lineage2.2.1 | None | SRR12420304 | MDR-TB | lineage2.2.1 | None | SRR6832114 | MDR-TB | lineage2.2.1 | None | SRR6832561 | MDR-TB | lineage2.2.1 | None | SRR28498601 | MDR-TB | lineage2.2.1 | None | ERR5865902 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828774 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828972 | MDR-TB | lineage2.2.1 | None | SRR25207367 | MDR-TB | lineage2.2.1 | None | SRR6484967 | MDR-TB | lineage2.2.1 | None | SRR6832017 | MDR-TB | lineage2.2.1 | None | SRR18714924 | MDR-TB | lineage2.2.1 | None | SRR29539016 | HR-TB | lineage2.2.1 | None | ERR11068618 | MDR-TB | lineage2.2.1 | None | SRR29539365 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510623 | Pre-XDR-TB | lineage3.1 | pk | SRR29539812 | XDR-TB | lineage2.2.1 | None | ERR144605 | HR-TB | lineage4.2.1 | ru | SRR6484913 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256039 | MDR-TB | lineage2.2.1 | None | ERR2307520 | MDR-TB | lineage2.2.1 | None | SRR6832216 | MDR-TB | lineage2.2.1 | None | ERR4827721 | MDR-TB | lineage2.2.1 | None | ERR4822398 | Pre-XDR-TB | lineage2.2.1 | ua | ERR4829066 | MDR-TB | lineage2.2.1 | ng | SRR29539773 | Pre-XDR-TB | lineage2.2.1 | None | SRR28239537 | MDR-TB | lineage2.2.1 | None | SRR671840 | MDR-TB | lineage2.2.1 | cn | ERR12790847 | MDR-TB | lineage2.2.1 | None | ERR4811562 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4829372 | Pre-XDR-TB | lineage2.2.1 | it | ERR4813099 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4829065 | MDR-TB | lineage2.2.1 | ng | ERR751506 | MDR-TB | lineage2.2.1 | pe | SRR29681467 | Pre-XDR-TB | lineage2.2.1 | None | ERR751562 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4828687 | MDR-TB | lineage2.2.1 | None | ERR4828779 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831843 | MDR-TB | lineage2.2.1 | None | SRR6832856 | MDR-TB | lineage2.2.1 | None | ERR4827420 | MDR-TB | lineage2.2.1 | None | ERR2516723 | Pre-XDR-TB | lineage2.2.1 | pe | SRR6832381 | MDR-TB | lineage2.2.1 | None | ERR13266678 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR133861 | MDR-TB | lineage2.2.1 | ru | ERR13284564 | MDR-TB | lineage2.2.1 | None | SRR29681216 | MDR-TB | lineage2.2.1 | None | SRR29539622 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539856 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256077 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832598 | MDR-TB | lineage2.2.1 | None | ERR6865843 | Other | lineage4.3.3 | None | SRR7781513 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284488 | MDR-TB | lineage2.2.1 | None | ERR11068740 | Pre-XDR-TB | lineage2.2.1 | None | ERR3077990 | MDR-TB | lineage1.2.2.1 | None | ERR2510279 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510329 | Pre-XDR-TB | lineage2.2.1 | it | ERR3256152 | HR-TB | lineage1.2.1.2.1 | ph | SRR24799275 | MDR-TB | lineage2.2.1 | None | SRR21727886 | MDR-TB | lineage2.2.1 | None | ERR5866090 | MDR-TB | lineage2.2.1 | None | ERR2307562 | MDR-TB | lineage2.2.1 | None | SRR16088341 | MDR-TB | lineage2.2.1 | None | ERR4596923 | MDR-TB | lineage1.2.2.1 | None | ERR13290980 | Other | lineage2.2.1 | None | SRR29050830 | MDR-TB | lineage2.2.1 | None | SRR16087906 | MDR-TB | lineage2.2.1 | None | ERR11068412 | Pre-XDR-TB | lineage2.2.1 | None | SRR6831995 | MDR-TB | lineage2.2.1 | None | SRR29539587 | MDR-TB | lineage2.2.1 | None | SRR29539595 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539656 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827723 | MDR-TB | lineage2.2.1 | None | SRR20969770 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044362 | MDR-TB | lineage2.2.1 | None | ERR13276132 | MDR-TB | lineage2.2.1 | None | ERR11243537 | MDR-TB | lineage2.2.1 | None | ERR5866412 | MDR-TB | lineage2.2.1 | None | ERR7975664 | MDR-TB | lineage2.2.1 | None |
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