lineage | Count |
---|---|
45 | |
lineage4.9 | 4 |
lineage4.8;lineage1.1.2 | 1 |
lineage2.2.1 | 1 |
lineage1.1.2 | 13 |
lineage2.2 | 1 |
lineage4 | 3 |
lineage4.1.3 | 2 |
lineage4.1.2.1 | 5 |
lineage4.1 | 1 |
lineage4.6.2.2 | 1 |
lineage6.3.1 | 1 |
lineage4.5 | 3 |
lineage3 | 1 |
La1.8.1 | 1 |
lineage2 | 1 |
lineage4.2.2.2;lineage2.2.1 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 87 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046540 | HR-TB | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341418 | Other | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | ERR4830353 | Other | None | ERR10225545 | Sensitive | lineage4.8;lineage1.1.2 | None | SRR6789626 | Other | None | ERR067681 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502532 | HR-TB | None | ERR502889 | Other | None | ERR10225513 | Sensitive | lineage1.1.2 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3439432 | Other | None | ERR133986 | HR-TB | None | ERR3283027 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4407463 | HR-TB | None | ERR4407512 | Sensitive | lineage1.1.2 | None | ERR473332 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR5336148 | Other | None | ERR4811142 | MDR-TB | None | ERR9030297 | Sensitive | lineage1.1.2 | None | ERR702406 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9030313 | MDR-TB | None | ERR9030411 | Sensitive | lineage1.1.2 | None | ERR9030490 | MDR-TB | lineage1.1.2 | None | ERR9786101 | Sensitive | lineage4.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9030442 | MDR-TB | lineage1.1.2 | None | ERR9117709 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR12142341 | HR-TB | None | ERR9787197 | Other | None | SRR12882470 | Sensitive | lineage1.1.2 | None | SRR12416824 | HR-TB | None | SRR12882445 | Sensitive | lineage1.1.2 | None | SRR12882468 | HR-TB | lineage1.1.2 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12882474 | Sensitive | lineage1.1.2 | None | SRR12882685 | Sensitive | lineage1.1.2 | None | SRR12882677 | Sensitive | lineage1.1.2 | None | SRR19304036 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR12882691 | Sensitive | lineage1.1.2 | None | SRR17658565 | Other | lineage3 | None | SRR1791753 | Other | La1.8.1 | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR26159043 | Other | lineage4.9 | None | SRR25206861 | MDR-TB | lineage4.5 | None | SRR25827321 | Pre-XDR-TB | lineage4.2.2.2;lineage2.2.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675222 | Other | None | SRR3675236 | HR-TB | None | SRR3675488 | HR-TB | None | ERR2200120 | HR-TB | lineage4.5 | de | SRR3675501 | HR-TB | None | SRR3675510 | Other | None | ERR2229542 | Other | lineage4.8 | None | SRR3675550 | Other | None | SRR3675574 | HR-TB | None |
---|