lineage | Count |
---|---|
lineage2.2.1 | 17 |
lineage4.3.3 | 5 |
lineage4.8 | 9 |
lineage4.2 | 1 |
lineage1.1.3.1 | 1 |
lineage5.1.1 | 1 |
lineage4.7 | 4 |
lineage4.2.2.1 | 1 |
La1.7.X-unk4 | 1 |
lineage4.6.2.2 | 1 |
lineage4.1.2.1 | 4 |
lineage4.3.4.2 | 1 |
lineage4.4.1.1 | 4 |
lineage4.6.1.1 | 1 |
lineage4.2.2.2 | 1 |
lineage1.2.2.2 | 1 |
lineage4.5 | 2 |
lineage4.1.1.3 | 1 |
lineage3 | 2 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | ERR4827962 | MDR-TB | lineage2.2.1 | None | ERR4828141 | Other | lineage4.3.3 | None | SRR6485054 | Sensitive | lineage4.8 | None | SRR6785530 | Sensitive | lineage4.2 | None | SRR6785363 | HR-TB | lineage2.2.1 | None | SRR6785427 | MDR-TB | lineage2.2.1 | None | ERR7902754 | Sensitive | lineage1.1.3.1 | None | ERR10762456 | MDR-TB | lineage2.2.1 | None | ERR3794402 | MDR-TB | lineage2.2.1 | None | ERR4162008 | Sensitive | lineage5.1.1 | None | ERR4195360 | Sensitive | lineage4.7 | None | ERR4276859 | MDR-TB | lineage4.3.3 | None | ERR11044686 | MDR-TB | lineage4.2.2.1 | None | ERR3445495 | Other | La1.7.X-unk4 | None | ERR4811406 | Sensitive | lineage4.6.2.2 | None | ERR5863865 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911352 | MDR-TB | lineage4.1.2.1 | None | ERR7911354 | MDR-TB | lineage4.3.3 | None | ERR7910910 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR7911359 | HR-TB | lineage4.3.3 | None | ERR9121490 | Sensitive | lineage4.7 | None | ERR8158063 | Sensitive | lineage2.2.1 | None | ERR7911356 | MDR-TB | lineage4.3.3 | None | ERR9285794 | Sensitive | lineage4.4.1.1 | None | ERR9285965 | Sensitive | lineage4.1.2.1 | None | ERR9285836 | Sensitive | lineage4.6.1.1 | None | ERR9285897 | Sensitive | lineage4.2.2.2 | None | ERR9285796 | Sensitive | lineage4.1.2.1 | None | ERR9285883 | Sensitive | lineage4.8 | None | ERR9285908 | Sensitive | lineage4.4.1.1 | None | ERR9286035 | Sensitive | lineage4.4.1.1 | None | SRR22048297 | Sensitive | lineage4.7 | None | SRR14519939 | Sensitive | lineage1.2.2.2 | None | ERR9286037 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068959 | MDR-TB | lineage4.8 | None | SRR22048338 | Sensitive | lineage4.4.1.1 | None | ERR11081959 | HR-TB | lineage4.1.2.1 | None | ERR11068966 | Sensitive | lineage4.5 | None | ERR11081616 | Sensitive | lineage4.5 | None | ERR4818341 | MDR-TB | lineage2.2.1 | None | ERR11082000 | MDR-TB | lineage2.2.1 | None | ERR11082272 | Other | lineage4.1.1.3 | None | ERR9806936 | Pre-XDR-TB | lineage2.2.1 | None | ERR1950052 | Sensitive | lineage4.8 | None | ERR2229109 | Sensitive | lineage4.8 | None | ERR2229192 | Sensitive | lineage4.8 | None | ERR2513217 | Sensitive | lineage4.7 | None | SRR23862079 | Pre-XDR-TB | lineage2.2.1 | None | ERR2228972 | Sensitive | lineage4.8 | None | ERR2229095 | Sensitive | lineage4.8 | None | ERR4827650 | MDR-TB | lineage2.2.1 | None | ERR2510457 | Pre-XDR-TB | lineage3 | None | ERR2510289 | Pre-XDR-TB | lineage3 | None | ERR4827663 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827889 | Sensitive | lineage2.2.1 | None | ERR4827996 | Other | lineage2.2.1 | None | ERR4827897 | Sensitive | lineage2.2.1 | None | ERR4827443 | Other | lineage4.8 | None |
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