lineage | Count |
---|---|
lineage4.1.2.1 | 10 |
lineage4.2.1 | 4 |
lineage2.2.1.1 | 4 |
lineage4.4.1.1.1 | 58 |
lineage2.2.1 | 5 |
lineage4.1.2.1;lineage4.3.4.1 | 1 |
lineage1.1.3 | 2 |
lineage4.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 85 |
ID | Drug resistance | Lineage | Country iso2 | ERR3132178 | HR-TB | lineage4.1.2.1 | None | SRR28498660 | MDR-TB | lineage4.2.1 | None | ERR4831883 | MDR-TB | lineage2.2.1.1 | vn | SRR1173607 | MDR-TB | lineage4.4.1.1.1 | None | SRR1165703 | MDR-TB | lineage4.4.1.1.1 | None | SAMN02403503 | MDR-TB | lineage4.4.1.1.1 | za | SRR17657934 | RR-TB | lineage4.1.2.1 | None | ERR4831024 | Pre-XDR-TB | lineage2.2.1.1 | np | SRR29274025 | Pre-XDR-TB | lineage4.2.1 | None | SAMN02586025 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SRR6824692 | MDR-TB | lineage2.2.1 | cn | SRR1196528 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR10315580 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR4831910 | MDR-TB | lineage2.2.1.1 | None | SRR1169287 | MDR-TB | lineage4.4.1.1.1 | None | SRR1167339 | MDR-TB | lineage4.4.1.1.1 | None | SRR1165305 | MDR-TB | lineage4.4.1.1.1 | None | SRR1184352 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SAMN02403544 | MDR-TB | lineage4.4.1.1.1 | za | ERR1213926 | HR-TB | lineage4.1.2.1 | ma | SRR17657979 | RR-TB | lineage4.1.2.1 | None | ERR9992992 | XDR-TB | lineage4.4.1.1.1 | None | SRR1165647 | MDR-TB | lineage4.4.1.1.1 | None | SAMN02350491 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SRR1019165 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SAMN02403543 | MDR-TB | lineage4.4.1.1.1 | za | SRR1173195 | Other | lineage4.4.1.1.1 | None | SRR1167272 | MDR-TB | lineage4.4.1.1.1 | None | SRR17658033 | RR-TB | lineage4.1.2.1 | None | ERR13260862 | XDR-TB | lineage4.4.1.1.1 | None | SRR1196569 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR9971275 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR10315585 | MDR-TB | lineage4.4.1.1.1 | None | ERR2515265 | MDR-TB | lineage4.4.1.1.1 | za | SRR11662431 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167361 | MDR-TB | lineage4.4.1.1.1 | None | SRR1140957 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1165619 | MDR-TB | lineage4.4.1.1.1 | None | SRR1169160 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173270 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR11043341 | Pre-XDR-TB | lineage4.2.1 | None | SRR10315581 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SAMN02350443 | MDR-TB | lineage4.4.1.1.1 | za | SRR1167251 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173855 | MDR-TB | lineage4.4.1.1.1 | None | SAMN02350480 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SRR1173320 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR13286200 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1173181 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140941 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9993236 | XDR-TB | lineage4.4.1.1.1 | None | SRR6855861 | MDR-TB | lineage4.4.1.1.1 | None | SRR1169221 | MDR-TB | lineage4.4.1.1.1 | None | SRR1174832 | MDR-TB | lineage4.4.1.1.1 | None | SRR1184353 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR17658029 | RR-TB | lineage4.1.2.1 | None | SAMN02585990 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SRR1167363 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173226 | MDR-TB | lineage4.4.1.1.1 | None | ERR1034680 | Pre-XDR-TB | lineage4.1.2.1;lineage4.3.4.1 | co | ERR4553782 | MDR-TB | lineage1.1.3 | None | SRR1062850 | MDR-TB | lineage4.4.1.1.1 | None | SRR29017181 | MDR-TB | lineage1.1.3 | None | SRR17658032 | RR-TB | lineage4.1.2.1 | None | SRR5074123 | MDR-TB | lineage2.2.1 | vn | ERR8975942 | MDR-TB | lineage4.4.1.1.1 | None | ERR4831862 | MDR-TB | lineage2.2.1.1 | vn | ERR9993118 | XDR-TB | lineage4.4.1.1.1 | None | SRR17658031 | RR-TB | lineage4.1.2.1 | None | ERR9992641 | XDR-TB | lineage4.4.1.1.1 | None | SRR10315586 | MDR-TB | lineage4.4.1.1.1 | None | SAMN02403502 | MDR-TB | lineage4.4.1.1.1 | za | SRR17658030 | RR-TB | lineage4.1.2.1 | None | SRR28351395 | Pre-XDR-TB | lineage4.2.1 | None | SRR1173300 | MDR-TB | lineage4.4.1.1.1 | None | SRR1172061 | MDR-TB | lineage4.4.1.1.1 | None | SAMN02403564 | MDR-TB | lineage4.4.1.1.1 | za | SRR1169162 | MDR-TB | lineage4.4.1.1.1 | None | SRR5709756 | Pre-XDR-TB | lineage2.2.1 | th | ERR9992637 | XDR-TB | lineage4.4.1.1.1 | None | ERR3078000 | MDR-TB | lineage4.2.2.2 | None | SRR1019142 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1011479 | MDR-TB | lineage4.4.1.1.1 | None | ERR4831708 | MDR-TB | lineage2.2.1 | vn | SRR17658005 | HR-TB | lineage4.1.2.1 | None |
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