Rv3854c - c.-11A>G
Drug resistance types
0 Sensitive
0 RR-TB
18 HR-TB
396 MDR-TB
501 Pre-XDR-TB
57 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 933 |
| lineage4.1.1.1 | 4 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage2.2.1 | 8 |
| lineage4.2.1.1 | 2 |
| lineage3.1.1 | 3 |
| lineage4.3.2.1;lineage4.3.3 | 2 |
| lineage4.2.1 | 1 |
| lineage4.8 | 1 |
| lineage3.1.1;lineage4.3.3 | 3 |
| lineage2.2.1;lineage4.3.3 | 4 |
| lineage2.2.1.1;lineage4.3.3 | 1 |
| lineage2.2.1.1 | 7 |
| lineage4.3.3;lineage4.4.1.1 | 4 |
| lineage4 | 1 |
| lineage2;lineage4.3.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3 | 1 |
| lineage4.9 | 1 |
| lineage2.2.1.1;lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 980 |
Geographic prevalence
Country level data for this variant is available for 220 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR857281 | MDR-TB | lineage4.3.3 | None | SRR9971126 | Pre-XDR-TB | lineage4.3.3 | None | ERR1873435 | Pre-XDR-TB | lineage4.3.3 | None | ERR9119971 | MDR-TB | lineage4.3.3 | None | SRR1181220 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011474 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971039 | XDR-TB | lineage4.3.3 | None | ERR2515175 | Pre-XDR-TB | lineage4.3.3 | za | SRR1062835 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172140 | MDR-TB | lineage4.3.3 | None | SRR9971095 | Pre-XDR-TB | lineage4.3.3 | None | SRR833060 | MDR-TB | lineage4.3.3 | None | SRR833013 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925641 | Pre-XDR-TB | lineage4.3.3 | None | SRR1019162 | Pre-XDR-TB | lineage4.3.3 | None | ERR11068366 | MDR-TB | lineage4.3.3 | None | SAMN02585978 | Pre-XDR-TB | lineage4.3.3 | za | SRR1165660 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175307 | XDR-TB | lineage4.3.3 | None | SRR1183043 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830559 | XDR-TB | lineage4.3.3 | None | SRR1172254 | Pre-XDR-TB | lineage4.3.3 | None | ERR2515995 | MDR-TB | lineage4.1.1.1 | za | SRR924214 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172793 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350420 | MDR-TB | lineage4.3.3 | za | SRR1173023 | MDR-TB | lineage4.3.3 | None | SRR1196533 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488588 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR7911207 | MDR-TB | lineage4.3.3 | za | ERR9992791 | XDR-TB | lineage4.3.3 | None | ERR9119963 | MDR-TB | lineage4.3.3 | None | SRR1181396 | Pre-XDR-TB | lineage4.3.3 | None | ERR5918144 | MDR-TB | lineage4.3.3 | za | SRR1196504 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315684 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315611 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971228 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169248 | MDR-TB | lineage4.3.3 | None | SAMN02053806 | MDR-TB | lineage4.3.3 | za | SRR9971182 | MDR-TB | lineage4.3.3 | None | ERR7737895 | MDR-TB | lineage4.3.3 | None | ERR9992915 | XDR-TB | lineage4.3.3 | None | ERR9992620 | MDR-TB | lineage4.3.3 | None | ERR4830469 | Pre-XDR-TB | lineage4.3.3 | za | ERR9806902 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350412 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403573 | MDR-TB | lineage4.3.3 | za | ERR8975722 | MDR-TB | lineage4.3.3 | None | SRR833125 | Pre-XDR-TB | lineage4.3.3 | None | SRR833050 | Other | lineage4.3.3;lineage4.9 | None | SRR1062825 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01828249 | MDR-TB | lineage4.3.3 | za | ERR8025486 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488942 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748246 | MDR-TB | lineage4.3.3 | None | SRR1180258 | Pre-XDR-TB | lineage4.3.3 | None | ERR4809225 | MDR-TB | lineage4.3.3 | za | SRR1173142 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180959 | MDR-TB | lineage4.3.3 | None | SAMN02586014 | MDR-TB | lineage4.3.3 | za | SRR1181172 | Pre-XDR-TB | lineage4.3.3 | None | ERR10610221 | MDR-TB | lineage4.3.3 | None | ERR9992651 | MDR-TB | lineage4.3.3 | None | ERR10610199 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | ERR2515344 | Pre-XDR-TB | lineage4.3.3 | za | ERR4809290 | Pre-XDR-TB | lineage4.3.3 | za | ERR9993120 | XDR-TB | lineage4.3.3 | None | ERR9993117 | XDR-TB | lineage4.3.3 | None | SRR1184333 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350477 | MDR-TB | lineage4.3.3 | za | ERR9806959 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173555 | MDR-TB | lineage4.3.3 | None | ERR4798789 | Pre-XDR-TB | lineage2.2.1 | in | SRR1184304 | MDR-TB | lineage4.3.3 | None | SRR9971303 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971180 | XDR-TB | lineage4.3.3 | None | SRR1181321 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993156 | XDR-TB | lineage4.3.3 | None | SAMN02403512 | MDR-TB | lineage4.3.3 | za | SRR1181243 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02403550 | MDR-TB | lineage4.3.3 | za | SRR1173410 | HR-TB | lineage4.3.3 | None | SRR1181290 | Pre-XDR-TB | lineage4.3.3 | None | SRR924694 | Pre-XDR-TB | lineage4.3.3 | None | ERR4809168 | MDR-TB | lineage4.3.3 | za | ERR7911206 | Pre-XDR-TB | lineage4.3.3 | za | ERR8975695 | Pre-XDR-TB | lineage4.3.3 | None | SRR833040 | MDR-TB | lineage4.3.3 | za | ERR5987284 | MDR-TB | lineage4.3.3 | None | ERR11488842 | Pre-XDR-TB | lineage4.3.3 | None | SRR1019134 | MDR-TB | lineage4.3.3 | None | SRR847787 | Pre-XDR-TB | lineage4.3.3 | za | ERR7361984 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172835 | MDR-TB | lineage4.3.3 | None | SRR10868994 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993127 | MDR-TB | lineage4.3.3 | None | ERR7361978 | Pre-XDR-TB | lineage4.3.3 | None | SRR924226 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172095 | MDR-TB | lineage4.3.3 | None | SAMN02585957 | Pre-XDR-TB | lineage4.3.3 | za | SRR1196575 | Pre-XDR-TB | lineage4.3.3 | None | ERR2600531 | Other | lineage4.2.1.1 | None | SRR857288 | MDR-TB | lineage4.3.3 | None | SRR16156718 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011470 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180422 | Pre-XDR-TB | lineage4.3.3 | None | SRR857302 | MDR-TB | lineage4.3.3 | None | SRR1181138 | Pre-XDR-TB | lineage4.3.3 | None | ERR6052072 | MDR-TB | lineage4.3.3 | None | SRR1173351 | HR-TB | lineage4.3.3 | None | SRR857283 | MDR-TB | lineage4.3.3 | None | ERR9120081 | MDR-TB | lineage4.3.3 | None | SRR924211 | MDR-TB | lineage4.3.3 | None | ERR2041760 | MDR-TB | lineage2.2.1 | rs | SRR1180395 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02585977 | MDR-TB | lineage4.3.3 | za | SAMN02350414 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403567 | MDR-TB | lineage4.3.3 | za | SRR847788 | Pre-XDR-TB | lineage4.3.3 | za | SRR11342666 | MDR-TB | lineage4.3.3 | None | SRR1196511 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488368 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488703 | Pre-XDR-TB | lineage4.3.3 | None | SRR8758885 | Pre-XDR-TB | lineage4.3.3 | None | SRR833029 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737646 | MDR-TB | lineage3.1.1 | None | SRR1181376 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993018 | XDR-TB | lineage4.3.3 | None | ERR11773739 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773709 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773737 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773720 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773725 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773752 | Pre-XDR-TB | lineage4.3.3 | None | SRR8651621 | Pre-XDR-TB | lineage2.2.1 | cn | ERR9992841 | XDR-TB | lineage4.3.3 | None | SRR1196477 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181357 | Pre-XDR-TB | lineage4.3.3 | None | ERR4809238 | MDR-TB | lineage4.3.3 | za | ERR2515319 | Pre-XDR-TB | lineage4.3.3 | za | SRR924223 | Pre-XDR-TB | lineage4.3.3 | None | ERR4808878 | MDR-TB | lineage4.3.3 | za | SRR10315589 | MDR-TB | lineage4.3.3 | None | SRR1062854 | Pre-XDR-TB | lineage4.3.3 | None | SRR833023 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748477 | MDR-TB | lineage4.3.3 | None | SAMN01925633 | MDR-TB | lineage4.3.3 | None | SRR9971187 | Pre-XDR-TB | lineage4.3.3 | None | ERR6052100 | MDR-TB | lineage4.3.3 | None | SAMN02585976 | MDR-TB | lineage4.3.3 | za | ERR9119964 | MDR-TB | lineage4.3.3 | None | ERR7911444 | MDR-TB | lineage4.3.3 | za | SRR16156760 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488533 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02403621 | Pre-XDR-TB | lineage4.3.3 | za | SRR1167185 | Pre-XDR-TB | lineage4.3.3 | None | SRR833162 | MDR-TB | lineage4.3.3 | None | SRR10315627 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488502 | XDR-TB | lineage4.3.3 | None | SRR1173491 | Pre-XDR-TB | lineage4.3.3 | None | ERR2660503 | MDR-TB | lineage4.3.3 | None | ERR2515622 | Pre-XDR-TB | lineage4.3.2.1;lineage4.3.3 | za | ERR9993119 | Pre-XDR-TB | lineage4.3.3 | None | SRR5153075 | MDR-TB | lineage4.2.1 | None | SRR1173795 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184382 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165633 | MDR-TB | lineage4.3.3 | None | ERR11488689 | MDR-TB | lineage4.3.3 | None | SRR1184378 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184320 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011466 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315624 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172727 | MDR-TB | lineage4.3.3 | None | SRR1169271 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315605 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350427 | Pre-XDR-TB | lineage4.3.3 | za | SRR833058 | Pre-XDR-TB | lineage4.3.3 | za | SRR1173560 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971335 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR847776 | Pre-XDR-TB | lineage4.3.3 | za | SRR1062842 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173780 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971169 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586074 | Pre-XDR-TB | lineage4.3.3 | None | SRR833078 | Pre-XDR-TB | lineage4.3.3 | za | SRR9970989 | Pre-XDR-TB | lineage4.3.3 | None | ERR4809347 | Pre-XDR-TB | lineage4.3.3 | za | SRR1175065 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184027 | MDR-TB | lineage4.3.3 | None | SRR1062846 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196671 | MDR-TB | lineage4.3.3 | None | ERR9992661 | MDR-TB | lineage4.3.3 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SAMN02586102 | HR-TB | lineage4.3.3 | za | SAMN02350431 | Pre-XDR-TB | lineage4.3.3 | za | ERR10748273 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167373 | MDR-TB | lineage4.3.3 | None | ERR2600532 | Other | lineage4.2.1.1 | None | SAMN02403505 | MDR-TB | lineage4.3.3 | za | SRR1184328 | MDR-TB | lineage4.3.3 | None | SRR1173532 | MDR-TB | lineage4.3.3 | None | SRR1175066 | MDR-TB | lineage4.3.3 | None | SAMN02585962 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586090 | Pre-XDR-TB | lineage4.3.3 | za | SRR1144815 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167378 | MDR-TB | lineage4.3.3 | None | ERR9993243 | XDR-TB | lineage4.3.3 | None | SRR1180403 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181026 | MDR-TB | lineage4.3.3 | None | SAMN02053807 | Pre-XDR-TB | lineage4.3.3 | None | ERR11465081 | Pre-XDR-TB | lineage4.3.3 | None | SRR6896515 | MDR-TB | lineage4.3.3 | None | ERR9119877 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586070 | Pre-XDR-TB | lineage4.3.3 | za | SRR857286 | MDR-TB | lineage4.3.3 | None | ERR2515936 | MDR-TB | lineage4.3.3 | za | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971374 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830558 | XDR-TB | lineage4.3.3 | None | SRR847777 | Pre-XDR-TB | lineage4.3.3 | za | SRR1172918 | Other | lineage4.3.3 | None | SAMN02403513 | MDR-TB | lineage4.3.3 | za | ERR10748187 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180302 | MDR-TB | lineage4.3.3 | None | SRR1180157 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173396 | MDR-TB | lineage4.3.3 | None | SRR832995 | MDR-TB | lineage4.3.3 | None | ERR9992884 | MDR-TB | lineage4.3.3 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR9970987 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180435 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971240 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02403583 | MDR-TB | lineage4.3.3 | za | SAMN02403504 | MDR-TB | lineage4.3.3 | za | ERR9807040 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925660 | Pre-XDR-TB | lineage4.3.3 | None | SRR924206 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993011 | XDR-TB | lineage4.3.3 | None | SAMN02350429 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515506 | MDR-TB | lineage4.3.3 | za | SAMN02053803 | MDR-TB | lineage4.3.3 | za | SRR1165716 | MDR-TB | lineage4.3.3 | None | ERR9992612 | XDR-TB | lineage4.3.3 | None | ERR279481 | MDR-TB | lineage4.3.3 | None | SRR1062844 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342641 | MDR-TB | lineage4.3.3 | None | SAMN02350441 | MDR-TB | lineage4.3.3 | za | SRR857287 | MDR-TB | lineage4.3.3 | None | ERR9993020 | XDR-TB | lineage4.3.3 | None | SRR1062843 | Pre-XDR-TB | lineage4.3.3 | None | SRR924692 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748167 | MDR-TB | lineage4.3.3 | None | SRR832991 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361995 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806993 | Pre-XDR-TB | lineage4.3.3 | None | SRR857296 | MDR-TB | lineage4.3.3 | None | ERR9992615 | XDR-TB | lineage4.3.3 | None | SRR1196492 | MDR-TB | lineage4.3.3 | None | SRR1196576 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971170 | MDR-TB | lineage4.3.3 | None | SAMN02585981 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515776 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830515 | Pre-XDR-TB | lineage4.3.3 | za | ERR9993080 | MDR-TB | lineage4.3.3 | None | ERR4808988 | Pre-XDR-TB | lineage4.3.3 | za | SRR1167341 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488367 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173259 | Other | lineage4.3.3 | None | ERR7911443 | MDR-TB | lineage4.3.3 | za | SRR1183101 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992976 | MDR-TB | lineage4.3.3 | None | ERR11488985 | Pre-XDR-TB | lineage4.3.3 | None | ERR654967 | MDR-TB | lineage4.3.3 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR1183969 | MDR-TB | lineage4.3.3 | None | SRR16156743 | Pre-XDR-TB | lineage4.3.3 | None | ERR4831550 | Pre-XDR-TB | lineage4.3.3 | None | ERR7362014 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315630 | MDR-TB | lineage4.3.3 | None | SAMN02586085 | MDR-TB | lineage4.3.3 | za | ERR9992704 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180233 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173276 | XDR-TB | lineage4.3.3 | None | SRR924234 | Pre-XDR-TB | lineage4.3.3 | None | SRR847801 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196670 | MDR-TB | lineage4.3.3 | None | SRR847783 | Pre-XDR-TB | lineage4.3.3 | za | ERR11773747 | MDR-TB | lineage4.3.3 | None | ERR11773708 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773705 | Pre-XDR-TB | lineage4.3.3 | None | SRR28393342 | MDR-TB | lineage4.8 | None | ERR11773727 | Pre-XDR-TB | lineage4.3.3 | None | ERR11775618 | MDR-TB | lineage4.3.3 | None | ERR11773740 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971315 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062855 | MDR-TB | lineage4.3.3 | None | SAMN02586022 | MDR-TB | lineage4.3.3 | za | SRR1183042 | Pre-XDR-TB | lineage4.3.3 | None | SRR833105 | Pre-XDR-TB | lineage4.3.3 | za | SRR1173789 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | SRR9970994 | Pre-XDR-TB | lineage4.3.3 | None | SRR832996 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342650 | MDR-TB | lineage4.3.3 | None | ERR11083019 | MDR-TB | lineage4.3.3 | None | SRR1173201 | MDR-TB | lineage4.3.3 | None | ERR9992635 | XDR-TB | lineage4.3.3 | None | ERR10748169 | MDR-TB | lineage4.3.3 | None | ERR2515724 | MDR-TB | lineage4.3.3 | za | SRR1196510 | Pre-XDR-TB | lineage4.3.3 | None | SRR833130 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586018 | Pre-XDR-TB | lineage4.3.3 | za | SRR10315554 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992673 | MDR-TB | lineage4.3.3 | None | SRR857298 | MDR-TB | lineage4.3.3 | None | SRR1180219 | MDR-TB | lineage4.3.3 | None | SRR6855694 | MDR-TB | lineage4.3.3 | None | SAMN01828243 | Pre-XDR-TB | lineage4.3.3 | za | ERR9992893 | XDR-TB | lineage4.3.3 | None | SRR1173485 | HR-TB | lineage4.3.3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175055 | MDR-TB | lineage4.3.3 | None | ERR4830507 | MDR-TB | lineage4.3.3 | za | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR2515948 | MDR-TB | lineage4.3.3 | za | SRR1196516 | MDR-TB | lineage4.3.3 | None | ERR9993093 | MDR-TB | lineage4.3.3 | None | SRR1169191 | Pre-XDR-TB | lineage4.3.3 | None | SRR1183125 | MDR-TB | lineage4.3.3 | None | SRR1196496 | MDR-TB | lineage4.3.3 | None | SAMN02053741 | MDR-TB | lineage4.3.3 | za | ERR4831538 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SAMN02586104 | Pre-XDR-TB | lineage4.3.3 | za | ERR2516546 | Pre-XDR-TB | lineage2.2.1 | pe | SRR11342667 | MDR-TB | lineage4.3.3 | None | ERR4830506 | Pre-XDR-TB | lineage4.3.3 | za | ERR1367631 | HR-TB | lineage3.1.1 | None | ERR11488483 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361962 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169184 | MDR-TB | lineage4.3.3 | None | ERR4808881 | MDR-TB | lineage4.3.3 | za | SRR1196539 | MDR-TB | lineage4.3.3 | None | SRR1011458 | Pre-XDR-TB | lineage4.3.3 | None | SRR924212 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140944 | MDR-TB | lineage4.3.3 | None | ERR9992941 | MDR-TB | lineage4.3.3 | None | ERR9993235 | XDR-TB | lineage4.3.3 | None | SRR924207 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586017 | XDR-TB | lineage4.3.3 | za | SRR1062839 | Pre-XDR-TB | lineage4.3.3 | None | SRR924697 | Pre-XDR-TB | lineage4.3.3 | None | ERR5987341 | MDR-TB | lineage4.3.3 | None | SRR3055714 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975801 | Pre-XDR-TB | lineage2.2.1.1;lineage4.3.3 | None | SRR1011456 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350425 | Pre-XDR-TB | lineage4.3.3 | za | ERR7361957 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806653 | MDR-TB | lineage4.3.3 | None | ERR1193881 | Pre-XDR-TB | lineage4.3.3 | za | ERR4809248 | MDR-TB | lineage4.3.3 | za | SRR833149 | MDR-TB | lineage4.3.3 | None | SRR1184301 | Pre-XDR-TB | lineage4.3.3 | None | SRR1183967 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173574 | MDR-TB | lineage4.3.3 | None | SRR1196547 | MDR-TB | lineage4.3.3 | None | SRR847792 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02585987 | MDR-TB | lineage4.3.3 | za | ERR8025485 | Pre-XDR-TB | lineage4.3.3 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | SRR847785 | Pre-XDR-TB | lineage4.3.3 | za | SRR1165625 | MDR-TB | lineage4.3.3 | None | SAMN02350415 | Pre-XDR-TB | lineage4.3.3 | za | ERR8025765 | Pre-XDR-TB | lineage4.3.3 | None | SRR3055713 | Pre-XDR-TB | lineage4.3.3 | None | ERR5917968 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911073 | Pre-XDR-TB | lineage4.3.3 | za | SRR9971250 | Pre-XDR-TB | lineage4.3.3 | None | ERR5987411 | Pre-XDR-TB | lineage4.3.3 | None | ERR4809038 | MDR-TB | lineage4.3.3 | za | SRR1180353 | Pre-XDR-TB | lineage4.3.3 | None | ERR5987189 | MDR-TB | lineage4.3.3 | None | SAMN02586040 | Pre-XDR-TB | lineage4.3.3 | za | SRR1062827 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184331 | Pre-XDR-TB | lineage4.3.3 | None | SRR22175230 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR9971179 | XDR-TB | lineage4.3.3 | None | SRR1180301 | Pre-XDR-TB | lineage4.3.3 | None | SRR9970990 | Pre-XDR-TB | lineage4.3.3 | None | SRR6856026 | HR-TB | lineage4.3.3;lineage4.4.1.1 | None | SRR1196542 | XDR-TB | lineage4.3.3 | None | SRR16370411 | MDR-TB | lineage4.3.3 | None | SRR9971051 | Pre-XDR-TB | lineage4.3.3 | None | SRR833077 | Pre-XDR-TB | lineage4.3.3 | za | SRR1140955 | Pre-XDR-TB | lineage4.3.3 | None | ERR2516576 | MDR-TB | lineage4 | pe | SRR1172801 | XDR-TB | lineage4.3.3 | None | SAMN02585969 | Pre-XDR-TB | lineage4.3.3 | za | SRR1169155 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911198 | MDR-TB | lineage4.3.3 | za | SRR847793 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180388 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315698 | MDR-TB | lineage4.3.3 | None | SRR1175351 | MDR-TB | lineage4.3.3 | None | SAMN02586101 | MDR-TB | lineage4.3.3 | za | ERR2515375 | HR-TB | lineage4.3.3 | za | SRR1184319 | MDR-TB | lineage4.3.3 | None | ERR7361988 | Pre-XDR-TB | lineage4.3.3 | None | SRR857290 | MDR-TB | lineage4.3.3 | None | SRR1183008 | MDR-TB | lineage4.3.3 | None | SAMN02053744 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184300 | XDR-TB | lineage4.3.3 | None | SRR1173370 | MDR-TB | lineage4.3.3 | None | SRR924230 | Pre-XDR-TB | lineage4.3.3 | None | SRR847796 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053766 | Pre-XDR-TB | lineage4.3.3 | za | ERR10748480 | MDR-TB | lineage4.3.3 | None | SRR1062847 | MDR-TB | lineage4.3.3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR833033 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971123 | Pre-XDR-TB | lineage4.3.3 | None | SRR847782 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515400 | MDR-TB | lineage4.3.3 | za | SRR10315699 | MDR-TB | lineage4.3.3 | None | SRR9971230 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175304 | HR-TB | lineage4.3.3 | None | SRR1165674 | Pre-XDR-TB | lineage2;lineage4.3.3 | None | SRR833177 | MDR-TB | lineage4.3.3 | None | SAMN01925638 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184115 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173731 | MDR-TB | lineage4.3.3 | None | SRR924227 | Pre-XDR-TB | lineage4.3.3 | None | SRR1019143 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315612 | Pre-XDR-TB | lineage4.3.3 | None | SRR833137 | MDR-TB | lineage4.3.3 | None | ERR8025683 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196503 | Pre-XDR-TB | lineage4.3.3 | None | ERR2515153 | Pre-XDR-TB | lineage4.3.3 | za | ERR7361961 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586093 | MDR-TB | lineage4.3.3 | za | SRR1173294 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184324 | MDR-TB | lineage4.3.3 | None | SAMN01925669 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748232 | MDR-TB | lineage4.3.3 | None | SRR1169147 | MDR-TB | lineage4.3.3 | None | SAMN01925666 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993015 | MDR-TB | lineage4.3.3 | None | ERR473327 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173354 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586094 | MDR-TB | lineage4.3.3 | za | SRR11342637 | MDR-TB | lineage4.3.3 | None | SRR16156851 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361993 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169216 | MDR-TB | lineage4.3.3 | None | SAMN02586069 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911430 | Pre-XDR-TB | lineage4.3.3 | za | SRR1181353 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173200 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971276 | MDR-TB | lineage4.3.3 | None | SRR924216 | Pre-XDR-TB | lineage4.3.3 | None | ERR495012 | MDR-TB | lineage4.3.3 | None | ERR11488338 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181174 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975605 | MDR-TB | lineage4.3.3 | None | SRR857280 | MDR-TB | lineage4.3.3 | None | SRR1173368 | Other | lineage4.3.3 | None | SRR924231 | Pre-XDR-TB | lineage4.3.3 | None | SRR857284 | MDR-TB | lineage4.3.3 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | ERR11773750 | Pre-XDR-TB | lineage4.3.3 | None | ERR11773744 | MDR-TB | lineage4.3.3 | None | SRR1175039 | HR-TB | lineage4.3.3 | None | SAMN02586076 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925658 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971241 | Pre-XDR-TB | lineage4.3.3 | None | ERR5987371 | MDR-TB | lineage4.3.3 | None | SAMN02053785 | MDR-TB | lineage4.3.3 | za | SAMN02053805 | MDR-TB | lineage4.3.3 | za | SRR833074 | MDR-TB | lineage4.3.3 | None | ERR9993074 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184305 | MDR-TB | lineage4.3.3 | None | SRR1172870 | MDR-TB | lineage4.3.3 | None | ERR2515286 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830554 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196534 | MDR-TB | lineage4.3.3 | None | ERR2516031 | MDR-TB | lineage4.3.3 | za | SAMN02586057 | Pre-XDR-TB | lineage4.3.3 | za | SRR9970997 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488543 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586059 | MDR-TB | lineage4.3.3 | za | ERR4829106 | MDR-TB | lineage3.1.1 | dj | SRR833048 | MDR-TB | lineage4.3.3 | None | SRR1062834 | Pre-XDR-TB | lineage4.3.3 | None | ERR9120006 | MDR-TB | lineage4.3.3 | None | SAMN02403467 | Pre-XDR-TB | lineage4.3.3 | za | ERR2516069 | MDR-TB | lineage4.3.3 | za | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | ERR9120007 | MDR-TB | lineage4.3.3 | None | SRR924693 | Pre-XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | SRR10315604 | Pre-XDR-TB | lineage4.3.3 | None | ERR11465836 | MDR-TB | lineage4.3.3 | None | SAMN02053751 | MDR-TB | lineage4.3.3 | za | SAMN02586061 | MDR-TB | lineage4.3.3 | za | ERR9992664 | MDR-TB | lineage4.3.3 | None | SAMN01925654 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993029 | MDR-TB | lineage4.3.3 | None | ERR9806841 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172858 | MDR-TB | lineage4.3.3 | None | SRR1165698 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167359 | MDR-TB | lineage4.3.3 | None | SRR10315625 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586011 | MDR-TB | lineage4.3.3 | za | ERR2515682 | Pre-XDR-TB | lineage4.3.3 | za | SRR1011453 | Pre-XDR-TB | lineage4.3.3 | None | ERR8025610 | Pre-XDR-TB | lineage4.3.3 | None | SRR924233 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993168 | XDR-TB | lineage4.1.1.1 | None | ERR7911208 | Pre-XDR-TB | lineage4.3.3 | za | ERR9992894 | Pre-XDR-TB | lineage4.3.3 | None | SRR10868972 | MDR-TB | lineage4.3.3 | None | SRR1140960 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR857299 | MDR-TB | lineage4.3.3 | None | ERR4808971 | MDR-TB | lineage4.3.3 | None | SRR1165277 | MDR-TB | lineage4.3.3 | None | SRR9971173 | MDR-TB | lineage4.3.3 | None | SRR1173784 | MDR-TB | lineage4.3.3 | None | ERR2515924 | Pre-XDR-TB | lineage4.3.3 | za | SRR1196524 | MDR-TB | lineage4.3.3 | None | ERR7737731 | MDR-TB | lineage4.3.3 | None | ERR9992827 | MDR-TB | lineage4.3.3 | None | SRR1196523 | MDR-TB | lineage4.3.3 | None | SAMN01925636 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971166 | XDR-TB | lineage4.3.3 | None | SAMN01925657 | Pre-XDR-TB | lineage4.3.3 | None | ERR2515797 | MDR-TB | lineage4.3.3 | za | SRR1184310 | MDR-TB | lineage4.3.3 | None | SRR1062828 | Pre-XDR-TB | lineage4.3.3 | None | SRR833106 | MDR-TB | lineage4.3.3 | None | ERR9992957 | XDR-TB | lineage4.3.3 | None | SAMN02053773 | Pre-XDR-TB | lineage4.3.3 | za | SRR1184368 | MDR-TB | lineage4.3.3 | None | SRR1169277 | MDR-TB | lineage4.3.3 | None | ERR5987211 | MDR-TB | lineage4.3.3 | None | SRR16156686 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011483 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184297 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993123 | XDR-TB | lineage4.3.3 | None | SRR1184299 | MDR-TB | lineage4.3.3 | None | SRR1196568 | HR-TB | lineage4.3.3 | None | SRR1019166 | MDR-TB | lineage4.3.3 | None | SAMN02053748 | Pre-XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | ERR4809318 | MDR-TB | lineage4.3.3 | za | SAMN02053781 | MDR-TB | lineage4.3.3 | za | SAMN01925639 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350411 | Pre-XDR-TB | lineage4.3.3 | za | SRR1173101 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167250 | MDR-TB | lineage4.3.3 | None | SRR11349177 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349194 | MDR-TB | lineage4.3.3 | None | ERR8975080 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011472 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180330 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02585959 | Pre-XDR-TB | lineage4.3.3 | za | SRR847778 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586073 | Pre-XDR-TB | lineage4.3.3 | za | SRR1184375 | Pre-XDR-TB | lineage4.3.3 | None | SRR833121 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175064 | HR-TB | lineage4.3.3 | None | SRR16156731 | Pre-XDR-TB | lineage4.3.3 | None | SRR16156689 | Pre-XDR-TB | lineage4.3.3 | None | ERR5987395 | MDR-TB | lineage4.3.3 | None | SRR833086 | Pre-XDR-TB | lineage4.3.3 | za | SRR1062824 | Pre-XDR-TB | lineage4.3.3 | None | SRR5153605 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515560 | MDR-TB | lineage4.3.3 | za | SAMN02585997 | MDR-TB | lineage4.3.3 | za | SRR1181170 | Pre-XDR-TB | lineage4.3.3 | None | ERR2707149 | MDR-TB | lineage4.6.2.2 | cd | SRR857295 | MDR-TB | lineage4.3.3 | None | SAMN02586009 | MDR-TB | lineage4.3.3 | za | SRR924235 | MDR-TB | lineage4.3.3 | None | SRR1011468 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184359 | MDR-TB | lineage4.3.3 | None | ERR7361975 | Pre-XDR-TB | lineage4.3.3 | None | ERR1034984 | Pre-XDR-TB | lineage4.3.3 | za | SRR1181108 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488542 | Pre-XDR-TB | lineage4.3.3 | None | ERR8976013 | MDR-TB | lineage4.3.3 | None | SRR833064 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062826 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169212 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361959 | Pre-XDR-TB | lineage4.3.3 | None | ERR2515411 | Pre-XDR-TB | lineage4.3.3 | za | SRR1173094 | MDR-TB | lineage4.3.3 | None | SRR1175040 | Other | lineage4.3.3 | None | ERR7911213 | MDR-TB | lineage4.3.3 | za | ERR9119975 | MDR-TB | lineage4.3.3 | None | SRR958195 | MDR-TB | lineage4.3.3 | None | ERR11488702 | Pre-XDR-TB | lineage4.3.3 | None | ERR5987353 | MDR-TB | lineage4.3.3 | None | SAMN01925667 | Pre-XDR-TB | lineage4.3.3 | None | ERR5987215 | MDR-TB | lineage4.3.3 | None | ERR9992901 | XDR-TB | lineage4.3.3;lineage4.4.1.1 | None | SRR9971131 | MDR-TB | lineage4.3.3 | None | ERR4797852 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR9992695 | XDR-TB | lineage4.3.3 | None | SRR1180328 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737762 | MDR-TB | lineage4.3.3 | None | ERR10748489 | MDR-TB | lineage4.3.3 | None | SRR924213 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971375 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175022 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361977 | Pre-XDR-TB | lineage4.3.3 | None | ERR2515754 | Pre-XDR-TB | lineage4.3.3 | za | ERR7911190 | MDR-TB | lineage4.3.3 | za | ERR10748074 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993090 | XDR-TB | lineage4.3.3 | None | SRR16157125 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737888 | MDR-TB | lineage4.3.3 | None | ERR4808975 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173180 | Pre-XDR-TB | lineage4.3.3 | None | ERR4423490 | MDR-TB | lineage4.3.3 | None | ERR9806901 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975982 | XDR-TB | lineage4.3.3 | None | SRR9971097 | Pre-XDR-TB | lineage4.3.3 | None | SRR3055712 | MDR-TB | lineage4.3.3 | None | SRR1175325 | Pre-XDR-TB | lineage4.3.3 | None | SRR924205 | Pre-XDR-TB | lineage4.3.3 | None | SRR9970995 | XDR-TB | lineage4.3.3 | None | SAMN02053746 | MDR-TB | lineage4.3.3 | za | ERR10748215 | MDR-TB | lineage4.3.3 | None | SAMN02053760 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053804 | MDR-TB | lineage4.3.3 | za | SRR9971129 | MDR-TB | lineage4.3.3 | None | SAMN02586075 | XDR-TB | lineage4.3.3 | None | ERR9993253 | Pre-XDR-TB | lineage4.3.3 | None | ERR4800353 | XDR-TB | lineage2.2.1.1 | in | SRR11349192 | Pre-XDR-TB | lineage4.3.3 | None | ERR4799245 | XDR-TB | lineage2.2.1.1 | in | SAMN02586066 | Pre-XDR-TB | lineage4.3.3 | za | ERR4797902 | XDR-TB | lineage2.2.1.1 | in | SAMN01925668 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181352 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975783 | XDR-TB | lineage4.3.3 | None | ERR8975515 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586081 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350433 | Pre-XDR-TB | lineage4.3.3 | za | ERR7737921 | MDR-TB | lineage4.3.3 | None | ERR8975978 | MDR-TB | lineage4.1.1.1 | None | SRR1180281 | Pre-XDR-TB | lineage4.3.3 | None | ERR4423543 | MDR-TB | lineage4.3.3 | None | SRR1165629 | Pre-XDR-TB | lineage4.3.3 | None | SRR15014728 | MDR-TB | lineage3 | None | SAMN01925651 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350426 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925670 | Pre-XDR-TB | lineage4.3.3 | None | ERR9119926 | MDR-TB | lineage4.3.3 | None | ERR5987366 | MDR-TB | lineage4.3.3 | None | ERR9119976 | MDR-TB | lineage4.3.3 | None | SRR1196525 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165225 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011476 | MDR-TB | lineage4.3.3 | None | SRR1062822 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925614 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165261 | MDR-TB | lineage4.3.3 | None | SRR833173 | Pre-XDR-TB | lineage4.3.3 | za | ERR8975821 | XDR-TB | lineage4.3.3 | None | ERR7737693 | MDR-TB | lineage4.3.3 | None | SRR1173080 | MDR-TB | lineage4.3.3 | None | ERR4830524 | Pre-XDR-TB | lineage4.3.3 | za | SRR1173349 | Pre-XDR-TB | lineage4.3.3 | None | SRR1169193 | MDR-TB | lineage4.3.3 | None | SRR1019161 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175081 | MDR-TB | lineage4.3.3 | None | SAMN01925617 | Pre-XDR-TB | lineage4.3.3 | None | SRR924215 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748474 | MDR-TB | lineage4.3.3 | None | ERR9992614 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911627 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | za | SAMN02585973 | Pre-XDR-TB | lineage4.3.3 | za | SRR1181404 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586097 | MDR-TB | lineage4.3.3 | za | ERR10748177 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196555 | MDR-TB | lineage4.3.3 | None | SAMN02350460 | MDR-TB | lineage4.3.3 | za | ERR5918119 | Pre-XDR-TB | lineage4.3.3 | za | SRR857291 | MDR-TB | lineage4.3.3 | None | SRR833140 | MDR-TB | lineage4.3.3 | None | SRR833186 | MDR-TB | lineage4.3.3 | None | SRR1172869 | Pre-XDR-TB | lineage4.3.3 | None | SRR6855820 | HR-TB | lineage4.3.3 | None | SRR1173000 | MDR-TB | lineage4.3.3 | None | SRR9971053 | MDR-TB | lineage4.3.3 | None | SRR16156688 | Pre-XDR-TB | lineage4.3.3 | None | ERR2515743 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165644 | MDR-TB | lineage4.3.3 | None | ERR7737708 | MDR-TB | lineage4.3.3 | None | SRR1181262 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748454 | MDR-TB | lineage4.3.3 | None | SRR1011462 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140932 | MDR-TB | lineage4.3.3 | None | SRR9971285 | XDR-TB | lineage4.3.3 | None | SRR833163 | MDR-TB | lineage4.3.3 | None | SRR924225 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911209 | MDR-TB | lineage4.3.3 | za | SRR1173403 | MDR-TB | lineage4.3.3 | None | SRR1167183 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | SRR1165640 | MDR-TB | lineage4.3.3 | None | SRR9971040 | Pre-XDR-TB | lineage4.3.3 | None | SRR833115 | Pre-XDR-TB | lineage4.3.3 | za | ERR1193747 | MDR-TB | lineage4.3.3 | za | SAMN02586080 | Pre-XDR-TB | lineage4.3.3 | za | SRR9971176 | MDR-TB | lineage4.3.3 | None | ERR4831575 | Pre-XDR-TB | lineage4.3.3 | None | SRR1174833 | MDR-TB | lineage4.3.3 | None | ERR4808877 | Pre-XDR-TB | lineage4.3.3 | za | SRR1173482 | MDR-TB | lineage4.3.3 | None | SRR1011471 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925619 | Pre-XDR-TB | lineage4.3.3 | za | SRR1196686 | MDR-TB | lineage4.3.3 | None | ERR11488528 | MDR-TB | lineage4.3.3 | None | ERR9992908 | XDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR9806821 | Pre-XDR-TB | lineage4.3.3 | None | ERR10610155 | MDR-TB | lineage4.9 | None | ERR9120141 | MDR-TB | lineage4.3.3 | None | SRR1184369 | MDR-TB | lineage4.3.3 | None | SRR1181145 | Pre-XDR-TB | lineage4.3.3 | None | SRR847781 | MDR-TB | lineage4.3.3 | za | ERR6362466 | MDR-TB | lineage4.3.3 | None | SAMN01925640 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971090 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181198 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165323 | MDR-TB | lineage4.3.3 | None | SRR16156695 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165723 | Pre-XDR-TB | lineage4.3.3 | None | ERR5918112 | MDR-TB | lineage4.1.1.1 | za | ERR8975682 | XDR-TB | lineage4.3.3 | None | SRR1196515 | Pre-XDR-TB | lineage4.3.3 | None | SRR857294 | MDR-TB | lineage4.3.3 | None | ERR551452 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350413 | Pre-XDR-TB | lineage4.3.3 | za | SRR1062840 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911687 | Pre-XDR-TB | lineage4.3.3 | za | SRR1173072 | MDR-TB | lineage4.3.3 | None | ERR9992999 | XDR-TB | lineage4.3.3 | None | ERR11067646 | MDR-TB | lineage4.3.3 | None | SAMN02350434 | MDR-TB | lineage4.3.3 | za | ERR2515614 | Pre-XDR-TB | lineage4.3.3 | za | SRR11349167 | Pre-XDR-TB | lineage4.3.3 | None | SRR10869188 | Pre-XDR-TB | lineage4.3.3 | None | SRR847779 | Pre-XDR-TB | lineage4.3.3 | za | SRR857300 | MDR-TB | lineage4.3.3 | None | SRR1184315 | MDR-TB | lineage4.3.3 | None | ERR4800290 | XDR-TB | lineage2.2.1.1;lineage4.8 | in | SAMN01925661 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR9119972 | MDR-TB | lineage4.3.3 | None | SRR9971047 | MDR-TB | lineage4.3.3 | None | ERR9993116 | MDR-TB | lineage4.3.3 | None | ERR8975698 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315653 | Pre-XDR-TB | lineage4.3.3 | None | SRR924219 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011454 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925659 | Pre-XDR-TB | lineage4.3.3 | None | SRR833114 | MDR-TB | lineage4.3.3 | None | SRR10315458 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR7361976 | MDR-TB | lineage4.3.3 | None | SRR1140946 | MDR-TB | lineage4.3.3 | None | SRR9971273 | MDR-TB | lineage4.3.3 | None | SRR1180445 | Pre-XDR-TB | lineage4.3.3 | None | SRR1144793 | MDR-TB | lineage4.3.3 | None | SRR2101539 | MDR-TB | lineage4.3.3 | None | ERR9992972 | MDR-TB | lineage4.3.3 | None | ERR10748210 | MDR-TB | lineage4.3.3 | None | SRR1019172 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925650 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02585964 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586045 | MDR-TB | lineage4.3.3 | za | ERR9992629 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925618 | Pre-XDR-TB | lineage4.3.3 | None | ERR654964 | MDR-TB | lineage4.3.3 | None | SRR10315686 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925653 | Pre-XDR-TB | lineage4.3.3 | None | SRR6855944 | MDR-TB | lineage4.3.3 | None | SRR1180369 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911566 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586065 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350416 | Pre-XDR-TB | lineage4.3.3 | za | SRR1181089 | MDR-TB | lineage4.3.3 | None | SAMN02586063 | MDR-TB | lineage4.3.3 | za | SRR9971057 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196484 | MDR-TB | lineage4.3.3 | None | SRR833124 | MDR-TB | lineage4.3.3 | None | SAMN02350440 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02585982 | MDR-TB | lineage4.3.3 | None | SRR833006 | MDR-TB | lineage4.3.3 | None | ERR10610190 | Pre-XDR-TB | lineage4.3.3 | None | ERR5918042 | XDR-TB | lineage4.3.3 | za | ERR8975004 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971233 | MDR-TB | lineage4.3.3 | None | SRR1196754 | MDR-TB | lineage4.3.3 | None | SRR1165662 | MDR-TB | lineage4.3.3 | None | ERR6362445 | MDR-TB | lineage4.3.3 | None | ERR5918143 | MDR-TB | lineage4.3.3 | za | SRR1183035 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173442 | MDR-TB | lineage4.3.3 | None | SRR1173156 | MDR-TB | lineage4.3.3 | None | SRR1172843 | MDR-TB | lineage4.3.3 | None | SRR847775 | Pre-XDR-TB | lineage4.3.3 | za | ERR9806900 | Pre-XDR-TB | lineage4.3.3 | None | SRR833123 | MDR-TB | lineage4.3.3 | None | SRR1196587 | MDR-TB | lineage4.3.3 | None | SRR6856009 | MDR-TB | lineage4.3.3 | None | SAMN02586050 | MDR-TB | lineage4.3.3 | za | ERR11488678 | MDR-TB | lineage4.3.3 | None | SAMN02585965 | Pre-XDR-TB | lineage4.3.3 | za | SRR847789 | Pre-XDR-TB | lineage4.3.3 | za | ERR3132265 | MDR-TB | lineage4.3.3 | None | SRR10315655 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180293 | Pre-XDR-TB | lineage4.3.3 | None | SRR16156723 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975763 | Pre-XDR-TB | lineage4.3.3 | None | SRR833100 | MDR-TB | lineage4.3.3 | None | ERR8975819 | Pre-XDR-TB | lineage4.3.3 | None | SRR924696 | MDR-TB | lineage4.3.3 | None | SRR6982057 | HR-TB | lineage4.3.3 | None | SAMN02403568 | Pre-XDR-TB | lineage4.3.3 | za | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR847784 | MDR-TB | lineage4.3.3 | za | SRR847794 | Pre-XDR-TB | lineage4.3.3 | za | SRR1181355 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02403569 | Pre-XDR-TB | lineage4.3.3 | za | SRR1181008 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173107 | MDR-TB | lineage4.3.3 | None | SRR1167350 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196530 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180379 | Pre-XDR-TB | lineage4.3.3 | None | SRR847791 | Pre-XDR-TB | lineage4.3.3 | za | SRR1184336 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02053768 | MDR-TB | lineage4.3.3 | za | SRR9971332 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350485 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403572 | MDR-TB | lineage4.3.3 | za | SAMN01925675 | MDR-TB | lineage4.3.3 | None | SRR9971280 | MDR-TB | lineage4.3.3 | None | SRR1167289 | MDR-TB | lineage4.3.3 | None | ERR4808921 | MDR-TB | lineage4.3.3 | None | SRR9971153 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184335 | HR-TB | lineage4.3.3 | None | SRR833059 | Pre-XDR-TB | lineage4.3.3 | za | SRR924224 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181219 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925686 | MDR-TB | lineage4.3.3 | None | SRR1167273 | MDR-TB | lineage4.3.3 | None | SRR6855822 | Pre-XDR-TB | lineage4.3.2.1;lineage4.3.3 | None | SRR833037 | MDR-TB | lineage4.3.3 | None | SRR1062823 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830865 | MDR-TB | lineage4.3.3 | sz | SRR1011452 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173518 | Pre-XDR-TB | lineage3.1.1;lineage4.3.3 | None | ERR11488654 | MDR-TB | lineage4.3.3 | None | SRR1184367 | MDR-TB | lineage4.3.3 | None | ERR2516008 | MDR-TB | lineage4.3.3 | None | SRR1169200 | HR-TB | lineage4.3.3 | None | SRR833097 | MDR-TB | lineage4.3.3 | None | SAMN01925663 | Pre-XDR-TB | lineage4.3.3 | za | SRR1019171 | Pre-XDR-TB | lineage4.3.3 | None | ERR7361964 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SAMN01925615 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173039 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737638 | MDR-TB | lineage4.3.3 | None | ERR8975412 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011457 | Pre-XDR-TB | lineage4.3.3 | None | ERR9120082 | MDR-TB | lineage4.3.3 | None | SAMN02586060 | MDR-TB | lineage4.3.3 | za | ERR552049 | MDR-TB | lineage4.3.3 | None | SAMN02350481 | Pre-XDR-TB | lineage4.3.3 | za | SRR1173218 | Other | lineage4.3.3 | None | SRR1172119 | MDR-TB | lineage4.3.3 | None | SRR832980 | MDR-TB | lineage4.3.3 | None | SRR9971225 | MDR-TB | lineage4.3.3 | None | ERR9993081 | XDR-TB | lineage4.3.3 | None | ERR6362755 | MDR-TB | lineage4.3.3 | None | ERR4799380 | Pre-XDR-TB | lineage2.2.1.1 | in | SAMN02586068 | Pre-XDR-TB | lineage4.3.3 | za | SRR6981952 | MDR-TB | lineage4.3.3 | None | SRR1196685 | MDR-TB | lineage4.3.3 | None | SRR924232 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737750 | MDR-TB | lineage4.3.3 | None | SRR1011484 | MDR-TB | lineage4.3.3 | None | ERR8975914 | MDR-TB | lineage4.3.3 | None | SRR847800 | Pre-XDR-TB | lineage4.3.3 | za | ERR7361989 | Pre-XDR-TB | lineage4.3.3 | None | SRR11567797 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971096 | MDR-TB | lineage4.3.3 | None | SAMN02586034 | MDR-TB | lineage4.3.3 | za | ERR1193882 | MDR-TB | lineage4.3.3 | za | ERR9993040 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350486 | Pre-XDR-TB | lineage4.3.3 | za | SRR833196 | MDR-TB | lineage4.3.3 | None | SRR11567796 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349166 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172323 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911192 | Pre-XDR-TB | lineage4.3.3 | za | ERR4800437 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR1173391 | Pre-XDR-TB | lineage4.3.3 | None | ERR4831552 | MDR-TB | lineage4.3.3 | None | ERR8975018 | XDR-TB | lineage4.3.3 | None | SRR924220 | Pre-XDR-TB | lineage4.3.3 | None | SRR833062 | MDR-TB | lineage4.3.3 | None | ERR9806996 | Pre-XDR-TB | lineage4.3.3 | None | SRR1167335 | MDR-TB | lineage4.3.3 | None | ERR8975820 | XDR-TB | lineage4.3.3 | None | ERR5987340 | MDR-TB | lineage4.3.3 | None | SRR1180433 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737634 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011455 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165327 | MDR-TB | lineage4.3.3 | None | SAMN02053801 | MDR-TB | lineage4.3.3 | za | SRR1173448 | Pre-XDR-TB | lineage4.3.3 | None | ERR9119809 | MDR-TB | lineage4.3.3 | None | ERR9992647 | XDR-TB | lineage4.3.3 | None | ERR5918120 | XDR-TB | lineage4.3.3 | za | SAMN02586087 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515988 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830505 | MDR-TB | lineage4.3.3 | None | SRR1172275 | MDR-TB | lineage4.3.3 | None | SRR1140949 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173194 | MDR-TB | lineage4.3.3 | None | SRR1011463 | Pre-XDR-TB | lineage4.3.3 | None | ERR4808891 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586084 | Pre-XDR-TB | lineage4.3.3 | za | SRR1181260 | Pre-XDR-TB | lineage4.3.3 | None | SAMN01925634 | Pre-XDR-TB | lineage4.3.3 | za | ERR2660500 | MDR-TB | lineage4.3.3 | None | SRR1184389 | MDR-TB | lineage4.3.3 | None | ERR11488574 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488704 | Pre-XDR-TB | lineage4.3.3 | None | ERR9119743 | MDR-TB | lineage4.3.3 | None | ERR2516797 | MDR-TB | lineage4.3.3 | gb | SAMN02350430 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586041 | Pre-XDR-TB | lineage4.3.3 | za | SRR1173324 | HR-TB | lineage4.3.3 | None | SAMN02350421 | Pre-XDR-TB | lineage4.3.3 | za | ERR1633780 | MDR-TB | lineage4.3.3 | za | SRR1196518 | MDR-TB | lineage4.3.3 | None | SRR1184321 | MDR-TB | lineage4.3.3 | None | SRR6397370 | HR-TB | lineage2.2.1 | ca | SRR1184366 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184022 | MDR-TB | lineage4.3.3 | None | SRR1167331 | MDR-TB | lineage4.3.3 | None | ERR4830557 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180429 | Pre-XDR-TB | lineage4.3.3 | None | SRR833067 | MDR-TB | lineage4.3.3 | None | SRR1173199 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173449 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184293 | MDR-TB | lineage4.3.3 | None | SRR924208 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350475 | MDR-TB | lineage4.3.3 | za | SRR10315609 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748245 | MDR-TB | lineage4.3.3 | None | SRR1181391 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748272 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181218 | Pre-XDR-TB | lineage4.3.3 | None | ERR10748249 | MDR-TB | lineage4.3.3 | None | SRR1184326 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02403549 | MDR-TB | lineage4.3.3 | za | SRR16156753 | Pre-XDR-TB | lineage4.3.3 | None | ERR5917976 | XDR-TB | lineage4.3.3 | za | ERR7737725 | MDR-TB | lineage4.3.3 | None | ERR4423544 | MDR-TB | lineage4.3.3 | None | SAMN02586079 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350422 | Pre-XDR-TB | lineage4.3.3 | za | ERR9992871 | XDR-TB | lineage4.3.3 | None | SRR10315583 | Pre-XDR-TB | lineage4.3.3 | None |
|---|
