Rv3854c - c.-552T>A


Drug resistance types
19 Sensitive 5 RR-TB 5 HR-TB 4 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 4 Other
lineage Counts
lineage Count
lineage4.8 8
lineage4.1.2.1 6
lineage2.2.1 16
lineage4.1 1
lineage4.2.1 4
lineage4.3.3 4
lineage3 1
lineage4.2.1.1 1
spoligotype Counts
spoligotype Count
None 41
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR7764394 Other lineage4.8 None
ERR11049114 HR-TB lineage4.1.2.1 None
SRR23861770 Pre-XDR-TB lineage2.2.1 None
ERR11068620 MDR-TB lineage4.1 None
SRR23861733 RR-TB lineage4.2.1 None
SRR23861760 RR-TB lineage4.1.2.1 None
SRR23861777 Sensitive lineage4.8 None
SRR1003100 Pre-XDR-TB lineage2.2.1 None
SRR23861711 Sensitive lineage4.8 None
SRR23861822 Sensitive lineage4.8 None
SRR23861798 Sensitive lineage4.2.1 None
SRR23861799 Sensitive lineage4.3.3 None
SRR23861808 HR-TB lineage4.2.1 None
SRR23861812 Sensitive lineage4.8 None
SRR23861845 Other lineage2.2.1 None
SRR23861829 MDR-TB lineage2.2.1 None
SRR23861847 Sensitive lineage4.1.2.1 None
SRR23861865 RR-TB lineage4.8 None
SRR23861925 Other lineage4.3.3 None
SRR23861896 Sensitive lineage2.2.1 None
SRR23861930 RR-TB lineage4.8 None
SRR23861893 RR-TB lineage4.1.2.1 None
SRR23861967 Sensitive lineage2.2.1 None
SRR23861923 Sensitive lineage2.2.1 None
SRR23861939 Sensitive lineage4.3.3 None
SRR23861951 Pre-XDR-TB lineage2.2.1 None
SRR23861961 Sensitive lineage2.2.1 None
SRR23861942 MDR-TB lineage2.2.1 None
SRR23861946 Sensitive lineage3 None
SRR23862038 HR-TB lineage2.2.1 None
SRR23861969 Pre-XDR-TB lineage2.2.1 None
SRR23862020 Sensitive lineage2.2.1 None
SRR23862034 Sensitive lineage4.2.1.1 None
SRR23861998 Sensitive lineage4.1.2.1 None
SRR23862041 Other lineage2.2.1 None
SRR23862043 MDR-TB lineage2.2.1 None
SRR23861924 Sensitive lineage4.8 None
SRR23862149 HR-TB lineage4.3.3 None
SRR23862062 Sensitive lineage4.2.1 None
SRR23862068 HR-TB lineage2.2.1 None
SRR23862192 Sensitive lineage4.1.2.1 None