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SRA data
Rv3854c
- c.-60C>T
Drug resistance types
16 Sensitive
2 RR-TB
2 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.2.1.1
9
lineage4.6.1.1
5
lineage2.2.1
3
lineage6.3.1
1
lineage2.2.1;lineage4.2.1.1
1
lineage1.1.1.1
1
lineage4.8
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
21
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR2446541
Sensitive
lineage4.6.1.1
nl
ERR2517154
Sensitive
lineage4.6.1.1
nl
ERR2600444
Sensitive
lineage4.2.1.1
None
ERR2600445
Sensitive
lineage4.2.1.1
None
ERR3170411
HR-TB
lineage6.3.1
gh
ERR3275275
Sensitive
lineage4.6.1.1
nl
SRR12634621
Sensitive
lineage4.6.1.1
None
SRR12634625
Sensitive
lineage4.6.1.1
None
SRR16088387
Sensitive
lineage4.2.1.1
None
SRR18715466
Sensitive
lineage4.2.1.1
None
Showing 1 to 10 of 21 entries
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