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SRA data
Rv3854c
- c.1010delT
Drug resistance types
0 Sensitive
0 RR-TB
2 HR-TB
110 MDR-TB
80 Pre-XDR-TB
6 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
191
lineage2.2.1;lineage4
2
lineage2.2.1;lineage4.9
1
lineage2.2.1;lineage4.3.3
1
lineage2.2.1;lineage4.8
1
lineage4.1.1.3
1
lineage2.2.1;lineage4.2.1
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
198
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR015611
Pre-XDR-TB
lineage2.2.1
None
ERR015614
MDR-TB
lineage2.2.1
ru
ERR017785
MDR-TB
lineage2.2.1;lineage4
None
ERR019859
HR-TB
lineage2.2.1;lineage4
None
ERR027452
MDR-TB
lineage2.2.1
ru
ERR027456
MDR-TB
lineage2.2.1
ru
ERR027465
MDR-TB
lineage2.2.1;lineage4.9
None
ERR027468
MDR-TB
lineage2.2.1
None
ERR067631
MDR-TB
lineage2.2.1
ru
ERR067644
Pre-XDR-TB
lineage2.2.1
ru
Showing 1 to 10 of 198 entries
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