Rv3854c - c.1010delT


Drug resistance types
0 Sensitive 0 RR-TB 2 HR-TB 104 MDR-TB 76 Pre-XDR-TB 6 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1 182
lineage2.2.1;lineage4.2.1 1
lineage4.1.1.3 1
lineage2.2.1;lineage4.3.3 1
lineage2.2.1;lineage4 2
lineage2.2.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 188
Geographic prevalence
Country level data for this variant is available for 39 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR234639 Pre-XDR-TB lineage2.2.1 ru
ERR158597 MDR-TB lineage2.2.1 ru
SRR10397212 Pre-XDR-TB lineage2.2.1 None
ERR067760 Pre-XDR-TB lineage2.2.1 ru
ERR137247 Pre-XDR-TB lineage2.2.1 ru
SRR6484895 Pre-XDR-TB lineage2.2.1 None
SRR8347539 Pre-XDR-TB lineage2.2.1 None
SRR23310845 HR-TB lineage2.2.1 None
SRR8379901 MDR-TB lineage2.2.1 None
SRR8352208 Pre-XDR-TB lineage2.2.1 None
SRR8370130 Pre-XDR-TB lineage2.2.1 None
ERR403295 MDR-TB lineage2.2.1 None
ERR234644 Pre-XDR-TB lineage2.2.1 ru
SRR3743415 Pre-XDR-TB lineage2.2.1 None
ERR133884 MDR-TB lineage2.2.1 ru
ERR108443 MDR-TB lineage2.2.1 ru
SRR6357007 Pre-XDR-TB lineage2.2.1 None
ERR5864930 MDR-TB lineage2.2.1 None
SRR11033743 MDR-TB lineage2.2.1 None
ERR027468 MDR-TB lineage2.2.1 None
SRR7070216 MDR-TB lineage2.2.1 None
ERR5864934 MDR-TB lineage2.2.1 None
SRR7657748 MDR-TB lineage2.2.1;lineage4.2.1 None
SRR14801595 Pre-XDR-TB lineage2.2.1 None
ERR5866380 MDR-TB lineage2.2.1 None
ERR5865709 MDR-TB lineage2.2.1 None
SRR8330159 Pre-XDR-TB lineage2.2.1 None
SRR8423050 Pre-XDR-TB lineage2.2.1 None
SRR6484910 Pre-XDR-TB lineage2.2.1 None
ERR5865909 MDR-TB lineage2.2.1 None
ERR3287415 MDR-TB lineage4.1.1.3 pe
ERR4828001 MDR-TB lineage2.2.1 None
ERR8773989 MDR-TB lineage2.2.1 None
ERR5864928 MDR-TB lineage2.2.1 None
ERR4827995 MDR-TB lineage2.2.1 None
SRR8366172 Pre-XDR-TB lineage2.2.1 None
SRR8344409 Pre-XDR-TB lineage2.2.1 None
ERR2307486 MDR-TB lineage2.2.1 None
SRR8368738 Pre-XDR-TB lineage2.2.1 None
ERR5864936 MDR-TB lineage2.2.1 None
SRR8369848 Pre-XDR-TB lineage2.2.1 None
ERR5865212 MDR-TB lineage2.2.1 None
SRR18715388 MDR-TB lineage2.2.1 None
ERR403284 Pre-XDR-TB lineage2.2.1 None
ERR5866381 MDR-TB lineage2.2.1 None
ERR5865908 MDR-TB lineage2.2.1 None
ERR5864710 Pre-XDR-TB lineage2.2.1 None
ERR015614 MDR-TB lineage2.2.1 ru
ERR137192 MDR-TB lineage2.2.1 ru
ERR5864929 MDR-TB lineage2.2.1 None
ERR5866131 MDR-TB lineage2.2.1 None
ERR4822385 Pre-XDR-TB lineage2.2.1 kg
ERR5865880 Pre-XDR-TB lineage2.2.1 None
SRR8335313 Pre-XDR-TB lineage2.2.1 None
ERR11774899 XDR-TB lineage2.2.1 None
ERR11773773 MDR-TB lineage2.2.1 None
SRR6356926 MDR-TB lineage2.2.1 None
ERR7362017 XDR-TB lineage2.2.1 None
SRR8352462 Pre-XDR-TB lineage2.2.1 None
ERR5864937 MDR-TB lineage2.2.1 None
SRR6914120 MDR-TB lineage2.2.1 None
ERR067671 Pre-XDR-TB lineage2.2.1 ru
ERR4827456 MDR-TB lineage2.2.1 None
SRR14801432 MDR-TB lineage2.2.1 None
SRR8335024 Pre-XDR-TB lineage2.2.1 None
ERR8665612 Pre-XDR-TB lineage2.2.1 None
SRR7653609 Pre-XDR-TB lineage2.2.1 None
SRR3085258 MDR-TB lineage2.2.1 None
SRR8426713 Pre-XDR-TB lineage2.2.1 None
ERR133918 MDR-TB lineage2.2.1 ru
ERR5866379 MDR-TB lineage2.2.1 None
ERR137254 Pre-XDR-TB lineage2.2.1 ru
SRR6785441 MDR-TB lineage2.2.1 None
SRR8362612 Pre-XDR-TB lineage2.2.1 None
ERR158588 Pre-XDR-TB lineage2.2.1 ru
SRR8335314 Pre-XDR-TB lineage2.2.1 None
ERR067755 MDR-TB lineage2.2.1 ru
ERR027456 MDR-TB lineage2.2.1 ru
ERR5864708 MDR-TB lineage2.2.1 None
ERR5864927 MDR-TB lineage2.2.1 None
ERR015611 Pre-XDR-TB lineage2.2.1 None
ERR5864935 MDR-TB lineage2.2.1 None
ERR137231 Pre-XDR-TB lineage2.2.1 ru
SRR8369295 MDR-TB lineage2.2.1 None
ERR067694 MDR-TB lineage2.2.1 ru
ERR117464 Pre-XDR-TB lineage2.2.1 ru
ERR133951 Pre-XDR-TB lineage2.2.1 ru
SRR24256376 MDR-TB lineage2.2.1 None
SRR8335148 Pre-XDR-TB lineage2.2.1 None
ERR4828015 MDR-TB lineage2.2.1 None
SRR8433213 Pre-XDR-TB lineage2.2.1 None
ERR5866411 Pre-XDR-TB lineage2.2.1 None
ERR108435 Pre-XDR-TB lineage2.2.1 ru
SRR6257091 MDR-TB lineage2.2.1 None
ERR11798537 Pre-XDR-TB lineage2.2.1 None
SRR8353274 MDR-TB lineage2.2.1 None
ERR5864709 Pre-XDR-TB lineage2.2.1 None
ERR137257 Pre-XDR-TB lineage2.2.1 ru
SRR8348943 MDR-TB lineage2.2.1 None
ERR067723 MDR-TB lineage2.2.1 ru
ERR5865211 MDR-TB lineage2.2.1 None
SRR23861996 MDR-TB lineage2.2.1 None
SRR7516458 Pre-XDR-TB lineage2.2.1 None
ERR5865769 MDR-TB lineage2.2.1 None
SRR16088463 Pre-XDR-TB lineage2.2.1 None
ERR5866133 MDR-TB lineage2.2.1 None
ERR067659 MDR-TB lineage2.2.1 ru
ERR4827973 MDR-TB lineage2.2.1 None
ERR4830161 MDR-TB lineage2.2.1 None
ERR11774895 XDR-TB lineage2.2.1 None
SRR28888049 XDR-TB lineage2.2.1 None
ERR11775770 MDR-TB lineage2.2.1 None
SRR28239507 MDR-TB lineage2.2.1 None
SRR8374278 Pre-XDR-TB lineage2.2.1 None
SRR8353483 MDR-TB lineage2.2.1 None
SRR10397111 MDR-TB lineage2.2.1 None
ERR067744 Pre-XDR-TB lineage2.2.1 ru
SRR13120442 MDR-TB lineage2.2.1 None
ERR5866132 MDR-TB lineage2.2.1 None
ERR403282 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
ERR067749 MDR-TB lineage2.2.1 ru
SRR28239754 Pre-XDR-TB lineage2.2.1 None
SRR8368398 Pre-XDR-TB lineage2.2.1 None
ERR2307565 Pre-XDR-TB lineage2.2.1 None
SRR6256983 MDR-TB lineage2.2.1 None
ERR4830145 Pre-XDR-TB lineage2.2.1 None
ERR3639750 MDR-TB lineage2.2.1 None
SRR8358462 Pre-XDR-TB lineage2.2.1 None
ERR144584 MDR-TB lineage2.2.1 ru
ERR133907 MDR-TB lineage2.2.1 ru
SRR8370129 Pre-XDR-TB lineage2.2.1 None
SRR3743438 Pre-XDR-TB lineage2.2.1 None
SRR8358501 Pre-XDR-TB lineage2.2.1 None
ERR551785 MDR-TB lineage2.2.1 None
ERR234597 MDR-TB lineage2.2.1 ru
ERR5866410 Pre-XDR-TB lineage2.2.1 None
ERR5866560 Pre-XDR-TB lineage2.2.1 None
ERR5864933 MDR-TB lineage2.2.1 None
SRR6356941 MDR-TB lineage2.2.1 None
SRR10397265 Pre-XDR-TB lineage2.2.1 None
ERR019859 HR-TB lineage2.2.1;lineage4 None
ERR227977 MDR-TB lineage2.2.1 ru
ERR144595 Pre-XDR-TB lineage2.2.1 ru
ERR067631 MDR-TB lineage2.2.1 ru
ERR5865907 MDR-TB lineage2.2.1 None
SRR6257107 MDR-TB lineage2.2.1 None
ERR5864931 MDR-TB lineage2.2.1 None
SRR24673525 Pre-XDR-TB lineage2.2.1 None
SRR10397167 MDR-TB lineage2.2.1 None
ERR11081373 MDR-TB lineage2.2.1 None
ERR027452 MDR-TB lineage2.2.1 ru
ERR5865210 MDR-TB lineage2.2.1 None
ERR133880 MDR-TB lineage2.2.1 ru
ERR5865710 MDR-TB lineage2.2.1 None
ERR067644 Pre-XDR-TB lineage2.2.1 ru
ERR027465 MDR-TB lineage2.2.1;lineage4.9 None
ERR5866409 Pre-XDR-TB lineage2.2.1 None
SRR8429911 MDR-TB lineage2.2.1 None
ERR4827982 Pre-XDR-TB lineage2.2.1 None
ERR017785 MDR-TB lineage2.2.1;lineage4 None
SRR14801966 MDR-TB lineage2.2.1 None
ERR5864707 MDR-TB lineage2.2.1 None
ERR229949 MDR-TB lineage2.2.1 ru
ERR403279 MDR-TB lineage2.2.1 None
ERR7362021 Pre-XDR-TB lineage2.2.1 None
ERR10762395 Pre-XDR-TB lineage2.2.1 None
SRR8847008 MDR-TB lineage2.2.1 None
SRR3082116 MDR-TB lineage2.2.1 None
ERR5865770 MDR-TB lineage2.2.1 None
ERR5865912 MDR-TB lineage2.2.1 None
ERR7975653 MDR-TB lineage2.2.1 None
SRR8426601 Pre-XDR-TB lineage2.2.1 None
ERR067667 MDR-TB lineage2.2.1 ru
ERR11043979 MDR-TB lineage2.2.1 None
SRR8357274 Pre-XDR-TB lineage2.2.1 None
SRR8327860 MDR-TB lineage2.2.1 None
SRR8354461 Pre-XDR-TB lineage2.2.1 None
ERR11773757 MDR-TB lineage2.2.1 None
ERR11774897 XDR-TB lineage2.2.1 None
ERR11774900 XDR-TB lineage2.2.1 None
ERR11773818 Pre-XDR-TB lineage2.2.1 None
SRR28351603 MDR-TB lineage2.2.1 None
ERR229976 MDR-TB lineage2.2.1 ru
SRR8327216 Pre-XDR-TB lineage2.2.1 None
ERR5864932 MDR-TB lineage2.2.1 None
ERR10762436 Pre-XDR-TB lineage2.2.1 None
SRR8347538 Pre-XDR-TB lineage2.2.1 None
ERR5864711 Pre-XDR-TB lineage2.2.1 None