Rv3854c - c.1012_*1553del
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
19 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 31 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 31 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4828045 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4827885 | MDR-TB | lineage2.2.1 | None |
| ERR4828075 | MDR-TB | lineage2.2.1 | None |
| SRR3085361 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4827923 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4827587 | MDR-TB | lineage2.2.1 | None |
| SRR3085287 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13266036 | MDR-TB | lineage2.2.1 | None |
| ERR4827447 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4827884 | MDR-TB | lineage2.2.1 | None |
| ERR4828082 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4828124 | MDR-TB | lineage2.2.1 | None |
| ERR551603_ERR551604 | MDR-TB | lineage2.2.1 | None |
| ERR2307378 | MDR-TB | lineage2.2.1 | None |
| ERR4828016 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4830891 | MDR-TB | lineage2.2.1 | None |
| ERR4828079 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4828121 | MDR-TB | lineage2.2.1 | None |
| ERR13266035 | MDR-TB | lineage2.2.1 | None |
| ERR4830018 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4828057 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR551604 | MDR-TB | lineage2.2.1 | None |
| ERR4828000 | MDR-TB | lineage2.2.1 | None |
| ERR4828010 | MDR-TB | lineage2.2.1 | None |
| SRR3085293 | MDR-TB | lineage2.2.1 | None |
| ERR4828118 | MDR-TB | lineage2.2.1 | None |
| ERR4827976 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4828019 | MDR-TB | lineage2.2.1 | None |
| SRR3082130 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR551603 | MDR-TB | lineage2.2.1 | None |
| ERR4827488 | MDR-TB | lineage2.2.1 | None |
