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SRA data
Rv3854c
- c.1034delA
Drug resistance types
0 Sensitive
1 RR-TB
8 HR-TB
15 MDR-TB
9 Pre-XDR-TB
2 XDR-TB
47 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.1.1
50
lineage2.2.1
13
lineage4.3.1
6
lineage1.1.2
5
lineage1.1.1;lineage2.2.1.2
2
lineage4.1.2.1
2
lineage2.2.1;lineage3.1.2
1
lineage1.1.1.1;lineage2.2.1
1
lineage2.2.1;lineage3
1
lineage4.1.1.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
82
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11044747
Pre-XDR-TB
lineage2.2.1
None
ERR13290889
HR-TB
lineage1.1.1
None
ERR2446114
HR-TB
lineage4.3.1
nl
ERR2517318
HR-TB
lineage4.3.1
nl
ERR2843438
Other
lineage1.1.1
None
ERR2843439
Other
lineage1.1.1
None
ERR2843440
Other
lineage1.1.1
None
ERR3014602
Pre-XDR-TB
lineage4.3.1
None
ERR3275674
HR-TB
lineage4.3.1
nl
ERR4815688
MDR-TB
lineage1.1.2
gb
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