Rv3854c - c.1047delT

Drug resistance types
0 Sensitive 2 RR-TB 11 HR-TB 32 MDR-TB 32 Pre-XDR-TB 7 XDR-TB 6 Other
lineage Counts
lineage Count
lineage4. 1
lineage4.8 9
lineage4.1.2 1
lineage4.1.2.1 5
lineage3 7
lineage4.3.3 6
lineage1.1.3.1 3
lineage2.2.1.1 4
lineage4.6.1.2 4
lineage2.2.1 26
lineage4.8;lineage2.2.1 2
lineage4.9 5
lineage4.1.1 1
lineage2.2.1.2 2
lineage3.1.2 2
lineage4.5 2
lineage4.1.1.3 2
lineage4.3.2.1;lineage2.2.1 2
lineage1.1.3 1
lineage4 2
spoligotype Counts
spoligotype Count
None 90
Geographic prevalence
Country level data for this variant is available for 38 isolates.
Statisctical support
Not enough data to calculate support.
ID Drug resistance Lineage Country iso2
SRR4035621 Other lineage4. None
ERR2229486 Other lineage4.8 None
SAMEA2533722 MDR-TB lineage4.8 uz
SRR4035795 HR-TB lineage4.1.2 None
ERR2513784 HR-TB lineage4.1.2.1 gb
SRR5341327 HR-TB lineage3 in
ERR2516496 MDR-TB lineage4.3.3 pe
SAMN02414928 MDR-TB lineage1.1.3.1 se
SRR5341391 HR-TB lineage3 in
ERR2516206 Pre-XDR-TB lineage4.3.3 be
ERR2517125 MDR-TB lineage2.2.1.1 gb
ERR2707024 MDR-TB lineage4.6.1.2 cd
ERR270672 HR-TB lineage4.1.2.1 None
SAMEA2535039 MDR-TB lineage4.8 uz
ERR2707026 MDR-TB lineage4.6.1.2 cd
ERR270704 HR-TB lineage4.1.2.1 None
ERR2707020 MDR-TB lineage4.6.1.2 cd
ERR4827754 MDR-TB lineage2.2.1 None
ERR4822586 Pre-XDR-TB lineage4.8;lineage2.2.1 tm
ERR4822594 Pre-XDR-TB lineage4.8;lineage2.2.1 tm
ERR4828974 Pre-XDR-TB lineage4.9 it
ERR4827753 MDR-TB lineage2.2.1 None
SRR5837710 Pre-XDR-TB lineage2.2.1.1 th
ERR4829392 Pre-XDR-TB lineage4.9 it
SRR6485153 Other lineage4.3.3 None
SRR6831902 Pre-XDR-TB lineage2.2.1 None
ERR3132179 Pre-XDR-TB lineage2.2.1 None
ERR3132175 Pre-XDR-TB lineage2.2.1 None
SRR7517690 XDR-TB lineage2.2.1 None
ERR046825 RR-TB lineage4.1.1 gb
SRR7517820 XDR-TB lineage2.2.1 None
ERR1034614 Pre-XDR-TB lineage3 pk
ERR1199105 MDR-TB lineage4.6.1.2 cd
ERR4797228 Pre-XDR-TB lineage2.2.1 in
ERR3287451 MDR-TB lineage4.3.3 pe
ERR4796544 Pre-XDR-TB lineage3 in
ERR4796360 XDR-TB lineage2.2.1 in
ERR4796773 Pre-XDR-TB lineage2.2.1 in
ERR4797772 Pre-XDR-TB lineage2.2.1 in
ERR4797313 HR-TB None
ERR4797726 MDR-TB lineage3 in
ERR4797938 HR-TB lineage3 in
ERR4797961 Pre-XDR-TB lineage2.2.1 in
ERR4800718 Pre-XDR-TB lineage2.2.1.2 None
ERR4799874 Pre-XDR-TB lineage3.1.2 in
ERR4799886 MDR-TB lineage4.8 in
ERR4800319 MDR-TB lineage4.8 in
ERR4800344 Pre-XDR-TB lineage3.1.2 in
ERR4800371 MDR-TB lineage2.2.1.1 in
ERR751527 Pre-XDR-TB lineage4.1.2.1 pe
ERR5865942 MDR-TB lineage4.8 None
ERR688046 Pre-XDR-TB lineage3 None
ERR751383 Pre-XDR-TB lineage4.1.2.1 pe
ERR789236 XDR-TB lineage2.2.1 None
ERR7764346 Pre-XDR-TB lineage2.2.1.2 None
ERR789235 XDR-TB lineage2.2.1 None
ERR789239 Pre-XDR-TB lineage2.2.1 None
ERR789237 Pre-XDR-TB lineage2.2.1 None
ERR789234 XDR-TB lineage2.2.1 None
ERR789238 XDR-TB lineage2.2.1 None
ERR8665537 Pre-XDR-TB lineage4.3.3 None
ERR8665868 Pre-XDR-TB lineage4.3.3 None
ERR9125330 MDR-TB lineage4.5 None
ERR8773609 MDR-TB lineage2.2.1 None
ERR8773611 MDR-TB lineage2.2.1 None
SRR11444106 HR-TB lineage4.1.1.3 None
SRR10303343 MDR-TB lineage4.3.2.1;lineage2.2.1 None
SRR10430396 MDR-TB lineage4.3.2.1;lineage2.2.1 None
SRR21747027 Pre-XDR-TB lineage2.2.1 None
SRR1163305 MDR-TB lineage1.1.3.1 None
SRR13180240 MDR-TB lineage2.2.1 None
SRR16058058 MDR-TB lineage4.5 None
SRR16088226 HR-TB lineage4.8 None
SRR1144834 MDR-TB None
SRR1146286 MDR-TB lineage1.1.3 None
SRR1163293 MDR-TB lineage1.1.3.1 None
SRR15901690 Pre-XDR-TB lineage4.9 None
SRR15901692 Pre-XDR-TB lineage4.9 None
SRR21677854 Other lineage4.1.1.3 None
SRR21685367 MDR-TB lineage2.2.1 None
SAMEA2534268 MDR-TB lineage4.8 uz
ERR11081565 Pre-XDR-TB lineage2.2.1 None
SRR8692905 HR-TB None
ERR10610327 Other lineage4.9 None
SRR21887646 MDR-TB lineage2.2.1 None
SRR8692790 RR-TB lineage4 None
SRR8692800 Other lineage4 None
SRR3105788 Pre-XDR-TB lineage2.2.1.1 None
ERR4813131 Pre-XDR-TB lineage2.2.1 None
SAMEA2534200 MDR-TB lineage4.8 uz