Rv3854c - c.1047dupT


Drug resistance types
0 Sensitive 0 RR-TB 5 HR-TB 14 MDR-TB 20 Pre-XDR-TB 5 XDR-TB 1 Other
lineage Counts
lineage Count
lineage4.1 4
lineage2.2.1 21
lineage1.1.2 1
lineage4.3.2.1 9
lineage2.2.2 2
lineage3 1
lineage1.1.2;lineage2.2.1 2
lineage2.2.1;lineage4 2
lineage1.2.2.2;lineage2.2.1 1
lineage2.2.1;lineage3.1.2 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 45
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18715049 MDR-TB lineage4.1 None
ERR4799246 Pre-XDR-TB lineage2.2.1 in
ERR9030460 MDR-TB lineage1.1.2 None
SRR22873607 XDR-TB lineage2.2.1 None
ERR8699201 MDR-TB lineage4.3.2.1 None
ERR11082293 Pre-XDR-TB lineage2.2.2 None
SRR28409329 Pre-XDR-TB lineage2.2.1 None
ERR2512385 Other lineage3 gb
ERR13276438 Pre-XDR-TB lineage2.2.2 None
ERR13290878 HR-TB lineage1.1.2;lineage2.2.1 None
ERR9120051 MDR-TB lineage4.3.2.1 None
ERR13292529 MDR-TB lineage4.3.2.1 None
ERR4796730 Pre-XDR-TB lineage2.2.1 in
ERR4800360 Pre-XDR-TB lineage2.2.1 in
ERR4796481 Pre-XDR-TB lineage2.2.1 None
ERR4796383 Pre-XDR-TB lineage2.2.1 in
SRR6832544 MDR-TB lineage4.1 None
SRR21747041 MDR-TB lineage2.2.1 None
ERR6362056 MDR-TB lineage4.3.2.1 None
ERR4798868 Pre-XDR-TB lineage2.2.1;lineage4 in
SRR25827565 Pre-XDR-TB lineage1.2.2.2;lineage2.2.1 None
ERR4815443 HR-TB lineage4.1 gb
SRR28351477 Pre-XDR-TB lineage2.2.1 None
ERR9120052 MDR-TB lineage4.3.2.1 None
ERR4831594 MDR-TB lineage4.3.2.1 None
ERR13266517 XDR-TB lineage2.2.1 None
SRR25827770 XDR-TB lineage2.2.1 None
ERR4800193 Pre-XDR-TB lineage2.2.1 in
ERR9027234 Pre-XDR-TB lineage2.2.1 None
SRR25827686 XDR-TB lineage2.2.1 None
SRR29539111 HR-TB lineage4.1 None
SRR30180328 MDR-TB lineage2.2.1 None
ERR4800221 HR-TB lineage1.1.2;lineage2.2.1 in
ERR4809162 MDR-TB lineage4.3.2.1 None
ERR11488415 MDR-TB lineage4.3.2.1 None
ERR4798269 Pre-XDR-TB lineage2.2.1 in
ERR13286031 Pre-XDR-TB lineage2.2.1 None
ERR5987349 MDR-TB lineage4.3.2.1 None
SRR25827868 Pre-XDR-TB lineage2.2.1;lineage3.1.2 None
SRR20969471 HR-TB lineage4.5 None
SRR27069365 Pre-XDR-TB lineage2.2.1 None
ERR4796771 Pre-XDR-TB lineage2.2.1 in
ERR502899 Pre-XDR-TB lineage2.2.1 None
SRR25827530 XDR-TB lineage2.2.1;lineage4 None
ERR4822382 Pre-XDR-TB lineage2.2.1 kg