Rv3854c - c.1047dupT
Drug resistance types
0 Sensitive
0 RR-TB
3 HR-TB
13 MDR-TB
16 Pre-XDR-TB
2 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 14 |
| lineage4.1 | 3 |
| lineage4.5 | 1 |
| lineage2.2.2 | 1 |
| lineage3.1.2;lineage2.2.1 | 1 |
| lineage4;lineage2.2.1 | 2 |
| lineage2.2.1;lineage1.2.2.2 | 1 |
| lineage4.3.2.1 | 9 |
| lineage2.2.1;lineage1.1.2 | 1 |
| lineage3 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 35 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25827770 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715049 | MDR-TB | lineage4.1 | None | SRR20969471 | HR-TB | lineage4.5 | None | ERR11082293 | Pre-XDR-TB | lineage2.2.2 | None | SRR25827868 | Pre-XDR-TB | lineage3.1.2;lineage2.2.1 | None | SRR21747041 | MDR-TB | lineage2.2.1 | None | SRR25827530 | XDR-TB | lineage4;lineage2.2.1 | None | SRR22175222 | Pre-XDR-TB | lineage2.2.1 | None | SRR22873607 | XDR-TB | lineage2.2.1 | None | ERR502899 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827565 | Pre-XDR-TB | lineage2.2.1;lineage1.2.2.2 | None | ERR8699201 | MDR-TB | lineage4.3.2.1 | None | ERR4799246 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796383 | Pre-XDR-TB | lineage2.2.1 | in | ERR4822382 | Pre-XDR-TB | lineage2.2.1 | kg | ERR4798269 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796771 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798868 | Pre-XDR-TB | lineage4;lineage2.2.1 | in | ERR4796730 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800221 | HR-TB | lineage2.2.1;lineage1.1.2 | in | ERR4800193 | Pre-XDR-TB | lineage2.2.1 | in | ERR4831594 | MDR-TB | lineage4.3.2.1 | None | ERR4800360 | Pre-XDR-TB | lineage2.2.1 | in | SRR6832544 | MDR-TB | lineage4.1 | None | ERR2512385 | Other | lineage3 | gb | ERR11488415 | MDR-TB | lineage4.3.2.1 | None | ERR4815443 | HR-TB | lineage4.1 | gb | ERR2515759 | MDR-TB | lineage4.3.2.1 | za | ERR4809162 | MDR-TB | lineage4.3.2.1 | None | ERR5987349 | MDR-TB | lineage4.3.2.1 | None | ERR6362056 | MDR-TB | lineage4.3.2.1 | None | ERR9030460 | MDR-TB | lineage1.1.2 | None | ERR9120052 | MDR-TB | lineage4.3.2.1 | None | ERR9027234 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120051 | MDR-TB | lineage4.3.2.1 | None |
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