Rv3854c - c.1054delG


Drug resistance types
0 Sensitive 2 RR-TB 12 HR-TB 46 MDR-TB 52 Pre-XDR-TB 0 XDR-TB 13 Other
lineage Counts
lineage Count
2
lineage4.2.2.2 17
lineage2.2 9
lineage4.4.1.2 3
lineage2.2.2 11
lineage2.2.1 27
lineage2.2.1.1 4
lineage3 5
lineage2.2.1.2 2
lineage3.1.2 1
lineage5.1.1 3
lineage4.1.2.1 13
lineage4.4.1 1
lineage4.4.1.1 2
lineage3.1.2;lineage1.2.2 1
lineage1.1.1 2
lineage1.1.2 4
lineage1.1.3.2 4
lineage4.2.2 1
lineage4.8 2
lineage4.2.2.1 1
lineage4.3.3 1
lineage2.1 2
lineage4.2.1 1
lineage1.2.2 1
La1.8.1 1
lineage4.1.3 4
spoligotype Counts
spoligotype Count
None 125
Geographic prevalence
Country level data for this variant is available for 44 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4553600 MDR-TB None
ERR4011971 MDR-TB lineage4.2.2.2 None
ERR4553578 MDR-TB lineage2.2 None
ERR4423623 MDR-TB lineage4.4.1.2 None
ERR4553534 MDR-TB lineage2.2 None
ERR4553579 MDR-TB lineage2.2 None
ERR4553603 MDR-TB lineage2.2.2 None
ERR4553664 MDR-TB lineage2.2 None
ERR4553630 MDR-TB lineage2.2 None
ERR4553662 MDR-TB lineage2.2 None
ERR4553816 MDR-TB lineage2.2 None
ERR4553702 MDR-TB lineage2.2.2 None
ERR4553725 MDR-TB lineage2.2.2 None
ERR4553774 Pre-XDR-TB lineage2.2.2 None
ERR4553904 Pre-XDR-TB lineage2.2 None
ERR4553889 Pre-XDR-TB lineage2.2.2 None
ERR4553825 MDR-TB lineage2.2 None
ERR4553893 Pre-XDR-TB lineage2.2.2 None
ERR4553944 MDR-TB lineage2.2.2 None
ERR4553939 MDR-TB lineage2.2.2 None
ERR4796525 Pre-XDR-TB lineage2.2.1 in
ERR4797735 Pre-XDR-TB lineage2.2.1 in
ERR4796702 Pre-XDR-TB lineage2.2.1 in
ERR4798155 Pre-XDR-TB lineage2.2.1.1 in
ERR4800228 Pre-XDR-TB lineage3 in
ERR4800061 Pre-XDR-TB lineage2.2.1.2 in
ERR4799416 Pre-XDR-TB lineage2.2.1 in
ERR4799587 Pre-XDR-TB lineage3.1.2 in
ERR4810976 Pre-XDR-TB lineage2.2.1 cn
ERR7737654 MDR-TB lineage4.2.2.2 None
ERR5866450 Pre-XDR-TB lineage2.2.1 None
ERR718193 MDR-TB lineage2.2.1 th
ERR718325 HR-TB lineage2.2.1 th
ERR751330 MDR-TB lineage5.1.1 None
ERR7737624 MDR-TB lineage4.2.2.2 None
ERR5866449 Pre-XDR-TB lineage2.2.1 None
ERR702432 MDR-TB lineage5.1.1 gh
ERR7975632 MDR-TB lineage4.1.2.1 None
ERR7911288 MDR-TB lineage2.2.1 vn
ERR7975647 MDR-TB lineage4.1.2.1 None
ERR7975635 Pre-XDR-TB lineage4.1.2.1 None
ERR7975637 Pre-XDR-TB lineage4.1.2.1 None
ERR7975633 Pre-XDR-TB lineage4.1.2.1 None
ERR7975685 MDR-TB lineage4.1.2.1 None
ERR7975658 MDR-TB lineage4.1.2.1 None
ERR7975679 MDR-TB lineage4.1.2.1 None
ERR11050167 Other lineage4.4.1 None
ERR8774238 MDR-TB lineage4.4.1.2 None
ERR8774569 Pre-XDR-TB lineage2.2.1 None
SRR11567804 Pre-XDR-TB lineage2.2.2 None
ERR11050166 Other lineage4.4.1.1 None
SRR1162897 Pre-XDR-TB lineage4.2.2.2 None
SRR1165366 Pre-XDR-TB lineage4.2.2.2 None
SRR11972358 Other lineage3.1.2;lineage1.2.2 None
SRR1166935 Pre-XDR-TB lineage4.2.2.2 None
SRR1167151 Pre-XDR-TB lineage4.2.2.2 None
SRR17729382 Other lineage1.1.1 None
SRR17729370 Other lineage1.1.1 None
SRR12199383 Other lineage1.1.2 None
SRR2099964 HR-TB lineage1.1.3.2 None
SRR1791910 Other None
SRR18911561 Pre-XDR-TB lineage4.2.2 None
SRR2100196 HR-TB lineage1.1.3.2 None
SRR22175203 Pre-XDR-TB lineage2.2.1 None
SRR21747011 RR-TB lineage2.2.2 None
SRR22048452 HR-TB lineage4.1.2.1 None
ERR11068707 Other lineage4.1.2.1 None
ERR4816691 Other lineage4.1.2.1 gb
SRR8380939 Pre-XDR-TB lineage2.2.1 in
ERR2229516 Other lineage4.8 None
ERR2513218 HR-TB lineage2.2.1.2 gb
ERR2229532 Other lineage4.8 None
ERR2516575 MDR-TB lineage4.2.2.1 None
SRR5153597 Pre-XDR-TB lineage2.2.1 None
ERR2446183 MDR-TB lineage4.2.2.2 nl
ERR3275336 MDR-TB lineage4.2.2.2 nl
ERR4819916 HR-TB lineage1.1.2 gb
ERR2517569 MDR-TB lineage4.2.2.2 nl
ERR270671 HR-TB lineage1.1.3.2 None
ERR4827585 Pre-XDR-TB lineage2.2.1 None
ERR2653151 HR-TB lineage4.3.3 None
ERR2707003 MDR-TB lineage4.4.1.2 cd
ERR2181457 MDR-TB lineage5.1.1 gh
ERR4821880 HR-TB lineage1.1.2 None
ERR4822352 Pre-XDR-TB lineage2.1 None
SRR5709873 MDR-TB lineage2.2.1 th
ERR4830799 Pre-XDR-TB lineage4.2.2.2 et
ERR4829954 Pre-XDR-TB lineage1.1.2 None
ERR4830803 Pre-XDR-TB lineage4.2.2.2 et
ERR4830805 MDR-TB lineage4.2.2.2 et
ERR4830611 Pre-XDR-TB lineage4.2.1 tm
ERR4829384 Pre-XDR-TB lineage2.2.1 it
ERR4830822 Pre-XDR-TB lineage4.2.2.2 et
ERR4830830 Pre-XDR-TB lineage4.2.2.2 et
SAMN02414970 Pre-XDR-TB lineage4.2.2.2 se
ERR4830845 MDR-TB lineage4.2.2.2 et
ERR4830952 Pre-XDR-TB lineage2.2.1 np
ERR3077975 MDR-TB lineage3 None
SRR671789 Pre-XDR-TB lineage2.2.1 cn
ERR4830954 Pre-XDR-TB lineage2.2.1 np
SRR671863 Pre-XDR-TB lineage2.2.1 cn
SRR6832694 Pre-XDR-TB lineage2.2.1 None
SRR671864 Pre-XDR-TB lineage2.2.1 cn
SRR671865 Pre-XDR-TB lineage2.2.1 cn
ERR3132127 Pre-XDR-TB lineage2.2.1.1 None
ERR2677422 MDR-TB lineage3 de
ERR3014623 Pre-XDR-TB lineage4.1.2.1 tn
SRR8348431 MDR-TB lineage2.2.1 None
SRR6982552 HR-TB lineage1.2.2 None
SRR8651558 Pre-XDR-TB lineage2.2.2 cn
SRR8600253 Other La1.8.1 None
SRR7645896 HR-TB lineage2.2.1 None
SRR998842 MDR-TB lineage4.1.3 None
SRR998843 MDR-TB lineage4.1.3 None
SRR998841 MDR-TB lineage4.1.3 None
ERR1035067 RR-TB lineage2.2.1.1 za
SRR998844 MDR-TB lineage4.1.3 None
DRR130141 Pre-XDR-TB lineage2.1 None
ERR11043035 Other lineage4.4.1.1 None
ERR11043899 Pre-XDR-TB lineage4.1.2.1 None
ERR11043677 MDR-TB lineage3 None
ERR11043526 MDR-TB lineage2.2.1 None
ERR117627 HR-TB lineage1.1.3.2 None
ERR1213887 Pre-XDR-TB lineage2.2.1.1 np
ERR3335769 Pre-XDR-TB lineage3 pk