TB-Profiler
Home
Upload
SRA data
Rv3854c
- c.1054delG
Drug resistance types
0 Sensitive
4 RR-TB
11 HR-TB
74 MDR-TB
70 Pre-XDR-TB
5 XDR-TB
9 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage2.2.1
34
lineage2.2.2
27
lineage4.2.2.2
23
lineage4.1.2.1
16
lineage2.2
12
lineage3
10
lineage4.4.1.1
6
lineage1.1.2
5
lineage2.1
4
lineage4.2.2
4
Showing 1 to 10 of 26 entries
Previous
1
2
3
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
173
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR130141
Pre-XDR-TB
lineage2.1
None
ERR1035067
RR-TB
lineage2.2.1.1
za
ERR11043035
Other
lineage4.4.1.1
None
ERR11043526
MDR-TB
lineage2.2.1
None
ERR11043677
MDR-TB
lineage3
None
ERR11043899
Pre-XDR-TB
lineage4.1.2.1
None
ERR11050166
Other
lineage4.4.1.1
None
ERR11068707
Other
lineage4.1.2.1
None
ERR11488791
MDR-TB
lineage4.4.1.1
None
ERR11488861
XDR-TB
lineage4.4.1.1
None
Showing 1 to 10 of 173 entries
Previous
1
2
3
4
5
…
18
Next