TB-Profiler
Home
Upload
SRA data
Rv3854c
- c.11dupA
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
2 MDR-TB
29 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage2.2.1
27
lineage2.2.1.1
2
lineage3
1
lineage4.1.4
1
Showing 1 to 4 of 4 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
31
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR4800655
MDR-TB
lineage3
None
ERR4972527
Pre-XDR-TB
lineage4.1.4
None
SAMN02419616
Pre-XDR-TB
lineage2.2.1
by
SAMN02419668
Pre-XDR-TB
lineage2.2.1
by
SRR1163104
Pre-XDR-TB
lineage2.2.1
None
SRR1163135
Pre-XDR-TB
lineage2.2.1
None
SRR1163318
Pre-XDR-TB
lineage2.2.1
None
SRR1163431
Pre-XDR-TB
lineage2.2.1
None
SRR1169096
Pre-XDR-TB
lineage2.2.1
None
SRR1169116
Pre-XDR-TB
lineage2.2.1
None
Showing 1 to 10 of 31 entries
Previous
1
2
3
4
Next