Rv3854c - c.11dupA
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
2 MDR-TB
27 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 25 |
| lineage4.1.4 | 1 |
| lineage3 | 1 |
| lineage2.2.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20632815 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632771 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368924 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632789 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169116 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277273 | Pre-XDR-TB | lineage2.2.1 | None | SRR21277249 | Pre-XDR-TB | lineage2.2.1 | None | SRR8651593 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8651614 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4972527 | Pre-XDR-TB | lineage4.1.4 | None | SRR1163135 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232701 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800655 | MDR-TB | lineage3 | None | SRR1172231 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069461 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169096 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163104 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368738 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172383 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02419668 | Pre-XDR-TB | lineage2.2.1 | by | SRR1163318 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316584 | MDR-TB | lineage2.2.1 | None | SAMN02419616 | Pre-XDR-TB | lineage2.2.1 | by | SRR5341286 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR5341471 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR21276945 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163431 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632825 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632781 | Pre-XDR-TB | lineage2.2.1 | None |
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