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SRA data
Rv3854c
- c.1242dupT
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
9 MDR-TB
11 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
17
lineage4.1.1.3
2
lineage4.1.2.1
1
lineage2.2.2
1
Showing 1 to 4 of 4 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
21
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11773827
Pre-XDR-TB
lineage2.2.1
None
ERR13284534
MDR-TB
lineage2.2.1
None
ERR13284626
MDR-TB
lineage2.2.1
None
ERR133945
MDR-TB
lineage2.2.1
ru
ERR1768641
Pre-XDR-TB
lineage2.2.1
None
ERR2516352
Pre-XDR-TB
lineage2.2.1
be
ERR3639767
Pre-XDR-TB
lineage2.2.1
None
ERR4797338
Pre-XDR-TB
lineage4.1.1.3
in
ERR4798022
Pre-XDR-TB
lineage4.1.1.3
in
ERR553268
MDR-TB
lineage2.2.1
None
Showing 1 to 10 of 21 entries
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