Rv3854c - c.1290delC


Drug resistance types
0 Sensitive 0 RR-TB 1 HR-TB 18 MDR-TB 22 Pre-XDR-TB 1 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1 18
lineage4.6.2.2 5
lineage4.1.1.3 7
lineage2.2.1;lineage4.1.1.3 1
lineage4.1.1.3;lineage4.3.4.2 3
lineage2.2.1;lineage4.3.3 1
lineage3 2
lineage4 2
lineage4.4.2 1
lineage2.2.1;lineage3 1
lineage4.8.1 1
spoligotype Counts
spoligotype Count
None 42
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR28393598 Pre-XDR-TB lineage2.2.1 None
SRR28045908 XDR-TB lineage2.2.1 None
SRR28393544 Pre-XDR-TB lineage2.2.1 None
ERR8774514 MDR-TB lineage4.6.2.2 None
ERR1394278 Pre-XDR-TB lineage2.2.1 None
ERR9807036 Pre-XDR-TB lineage4.1.1.3 None
ERR8025595 Pre-XDR-TB lineage4.1.1.3 None
ERR4830745 MDR-TB lineage2.2.1 ir
ERR4423781 MDR-TB lineage4.6.2.2 None
SRR25827351 Pre-XDR-TB lineage2.2.1;lineage4.1.1.3 None
ERR10877856 MDR-TB lineage2.2.1 None
ERR3287857 Pre-XDR-TB lineage4.1.1.3;lineage4.3.4.2 None
ERR2020070 Pre-XDR-TB lineage2.2.1 None
ERR9806954 Pre-XDR-TB lineage4.1.1.3 None
SRR5709801 Pre-XDR-TB lineage2.2.1 th
ERR5917974 Pre-XDR-TB lineage4.1.1.3 None
ERR4796746 Pre-XDR-TB lineage2.2.1 in
ERR9029872 Pre-XDR-TB lineage4.1.1.3;lineage4.3.4.2 None
ERR133821 MDR-TB lineage2.2.1;lineage4.3.3 None
ERR8774512 MDR-TB lineage4.6.2.2 None
ERR4829981 MDR-TB lineage4.6.2.2 None
SRR25389451 HR-TB lineage2.2.1 None
ERR4423782 MDR-TB lineage4.6.2.2 None
SRR22424750 Pre-XDR-TB lineage3 None
ERR2515640 Pre-XDR-TB lineage4.1.1.3 za
ERR3132222 MDR-TB lineage2.2.1 None
ERR7911536 Pre-XDR-TB lineage4.1.1.3 za
SRR28393349 MDR-TB lineage4 None
ERR4799803 MDR-TB lineage3 in
SRR10147712 MDR-TB lineage2.2.1 None
SRR7898220 Pre-XDR-TB lineage2.2.1 in
SRR25515586 MDR-TB lineage2.2.1 None
ERR2516418 Pre-XDR-TB lineage2.2.1 pe
SAMEA5570051 Pre-XDR-TB lineage4.1.1.3;lineage4.3.4.2 None
ERR2516666 Pre-XDR-TB lineage2.2.1 pe
ERR4813333 MDR-TB lineage4 None
SRR18002890 MDR-TB lineage4.4.2 None
SRR25827370 MDR-TB lineage2.2.1;lineage3 None
SRR1723807 MDR-TB lineage2.2.1 cn
SRR9971125 MDR-TB lineage4.8.1 None
ERR10869423 Pre-XDR-TB lineage2.2.1 None
ERR4896323 Pre-XDR-TB lineage4.1.1.3 None